RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 MP68P56378 58 aa8.56□□□□□ -1.04
RAB3IP-203ENST00000378809 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
RAB3IP-203ENST00000378809 NDUFS5O43920 106 aa8.54□□□□□ -1.04
RAB3IP-203ENST00000378809 ASB16-AS1Q495Z4 193 aa8.54□□□□□ -1.04
RAB3IP-203ENST00000378809 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
RAB3IP-203ENST00000378809 FAT1Q14517 4588 aa8.53□□□□□ -1.04
RAB3IP-203ENST00000378809 H0Y9P7 68 aa8.53□□□□□ -1.04
RAB3IP-203ENST00000378809 PRR26Q8N8Z3 221 aa8.53□□□□□ -1.04
RAB3IP-203ENST00000378809 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
RAB3IP-203ENST00000378809 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
RAB3IP-203ENST00000378809 MRPL34Q9BQ48 92 aaKnown RBP8.51□□□□□ -1.05
RAB3IP-203ENST00000378809 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
RAB3IP-203ENST00000378809 Q5XG85 94 aa8.5□□□□□ -1.05
RAB3IP-203ENST00000378809 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
RAB3IP-203ENST00000378809 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
RAB3IP-203ENST00000378809 TP53AIP1Q9HCN2 124 aa8.48□□□□□ -1.05
RAB3IP-203ENST00000378809 SPINK1P00995 79 aa8.47□□□□□ -1.05
RAB3IP-203ENST00000378809 RYR3Q15413 4870 aa8.46□□□□□ -1.05
RAB3IP-203ENST00000378809 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.05
RAB3IP-203ENST00000378809 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.05
RAB3IP-203ENST00000378809 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.06
RAB3IP-203ENST00000378809 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
RAB3IP-203ENST00000378809 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
RAB3IP-203ENST00000378809 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
RAB3IP-203ENST00000378809 H3BPC8 53 aa8.44□□□□□ -1.06
RAB3IP-203ENST00000378809 LINC00313P59037 77 aa8.44□□□□□ -1.06
RAB3IP-203ENST00000378809 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
RAB3IP-203ENST00000378809 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
RAB3IP-203ENST00000378809 OXTP01178 125 aa8.41□□□□□ -1.06
RAB3IP-203ENST00000378809 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
RAB3IP-203ENST00000378809 PRR4Q16378 134 aa8.37□□□□□ -1.07
RAB3IP-203ENST00000378809 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
RAB3IP-203ENST00000378809 Q5VSD8 79 aa8.34□□□□□ -1.07
RAB3IP-203ENST00000378809 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
RAB3IP-203ENST00000378809 HSPG2P98160 4391 aa8.32□□□□□ -1.08
RAB3IP-203ENST00000378809 Q5W150 140 aa8.32□□□□□ -1.08
RAB3IP-203ENST00000378809 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
RAB3IP-203ENST00000378809 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
RAB3IP-203ENST00000378809 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
RAB3IP-203ENST00000378809 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
RAB3IP-203ENST00000378809 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
RAB3IP-203ENST00000378809 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
RAB3IP-203ENST00000378809 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
RAB3IP-203ENST00000378809 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
RAB3IP-203ENST00000378809 RYR1P21817 5038 aa8.25□□□□□ -1.09
RAB3IP-203ENST00000378809 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
RAB3IP-203ENST00000378809 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.1
RAB3IP-203ENST00000378809 C9orf92A6NGG3 77 aa8.2□□□□□ -1.1
RAB3IP-203ENST00000378809 LRP1Q07954 4544 aaKnown RBP8.2□□□□□ -1.1
RAB3IP-203ENST00000378809 Q8N1X5 172 aa8.19□□□□□ -1.1
RAB3IP-203ENST00000378809 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
RAB3IP-203ENST00000378809 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
RAB3IP-203ENST00000378809 TNXBP22105 4242 aa8.16□□□□□ -1.1
RAB3IP-203ENST00000378809 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
RAB3IP-203ENST00000378809 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
RAB3IP-203ENST00000378809 KRTAP10-8P60410 259 aa8.15□□□□□ -1.11
RAB3IP-203ENST00000378809 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.11
RAB3IP-203ENST00000378809 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
RAB3IP-203ENST00000378809 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
RAB3IP-203ENST00000378809 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
RAB3IP-203ENST00000378809 COA5Q86WW8 74 aa8.1□□□□□ -1.11
RAB3IP-203ENST00000378809 HRES1P13985 223 aa8.1□□□□□ -1.11
RAB3IP-203ENST00000378809 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
RAB3IP-203ENST00000378809 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.12
RAB3IP-203ENST00000378809 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
RAB3IP-203ENST00000378809 A8MUU9 505 aa8.05□□□□□ -1.12
RAB3IP-203ENST00000378809 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
RAB3IP-203ENST00000378809 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
RAB3IP-203ENST00000378809 ACYP2P14621 99 aa8□□□□□ -1.13
RAB3IP-203ENST00000378809 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
RAB3IP-203ENST00000378809 Q1T7F1 81 aa7.99□□□□□ -1.13
RAB3IP-203ENST00000378809 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
RAB3IP-203ENST00000378809 DMBT1Q9UGM3 2413 aaPredicted RBP7.96□□□□□ -1.13
RAB3IP-203ENST00000378809 Q75L30 129 aa7.95□□□□□ -1.14
RAB3IP-203ENST00000378809 CHKB-CPT1BH3BT56 60 aa7.95□□□□□ -1.14
RAB3IP-203ENST00000378809 PSPHP1O15172 72 aa7.95□□□□□ -1.14
RAB3IP-203ENST00000378809 V9GYY9 64 aa7.95□□□□□ -1.14
RAB3IP-203ENST00000378809 KRTAP4-5Q9BYR2 181 aa7.91□□□□□ -1.14
RAB3IP-203ENST00000378809 SPINK7P58062 85 aa7.89□□□□□ -1.15
RAB3IP-203ENST00000378809 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
RAB3IP-203ENST00000378809 A8MUN3 132 aa7.88□□□□□ -1.15
RAB3IP-203ENST00000378809 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
RAB3IP-203ENST00000378809 XP32Q5T750 250 aa7.86□□□□□ -1.15
RAB3IP-203ENST00000378809 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
RAB3IP-203ENST00000378809 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
RAB3IP-203ENST00000378809 Q5VV11 94 aa7.8□□□□□ -1.16
RAB3IP-203ENST00000378809 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
RAB3IP-203ENST00000378809 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
RAB3IP-203ENST00000378809 J3QL48 77 aa7.73□□□□□ -1.17
RAB3IP-203ENST00000378809 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
RAB3IP-203ENST00000378809 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
RAB3IP-203ENST00000378809 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
RAB3IP-203ENST00000378809 A6NED7 52 aa7.69□□□□□ -1.18
RAB3IP-203ENST00000378809 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
RAB3IP-203ENST00000378809 PRO0628Q9UI54 55 aa7.68□□□□□ -1.18
RAB3IP-203ENST00000378809 HERC2O95714 4834 aa7.67□□□□□ -1.18
RAB3IP-203ENST00000378809 A0A1B0GU69 56 aa7.67□□□□□ -1.18
RAB3IP-203ENST00000378809 LPAP08519 4548 aa7.66□□□□□ -1.18
RAB3IP-203ENST00000378809 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
RAB3IP-203ENST00000378809 LRP2P98164 4655 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms