RNA–Protein interactions for RNA: ENST00000378623.5

LRP4-201, Transcript of LDL receptor related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP4, Length 8,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-201ENST00000378623 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
LRP4-201ENST00000378623 ADGRG4Q8IZF6 3080 aa9.81□□□□□ -0.84
LRP4-201ENST00000378623 EYSQ5T1H1 3165 aa9.81□□□□□ -0.84
LRP4-201ENST00000378623 ZZEF1O43149 2961 aa9.8□□□□□ -0.84
LRP4-201ENST00000378623 NDUFAF8A1L188 74 aa9.8□□□□□ -0.84
LRP4-201ENST00000378623 UTP20O75691 2785 aaKnown RBP9.79□□□□□ -0.84
LRP4-201ENST00000378623 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
LRP4-201ENST00000378623 NBPF19A0A087WUL8 3843 aa9.74□□□□□ -0.85
LRP4-201ENST00000378623 KRTAP11-1Q8IUC1 163 aa9.73□□□□□ -0.85
LRP4-201ENST00000378623 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
LRP4-201ENST00000378623 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
LRP4-201ENST00000378623 TNP1P09430 55 aa9.71□□□□□ -0.85
LRP4-201ENST00000378623 IGSF10Q6WRI0 2623 aa9.7□□□□□ -0.86
LRP4-201ENST00000378623 TACC2O95359 2948 aa9.67□□□□□ -0.86
LRP4-201ENST00000378623 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
LRP4-201ENST00000378623 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
LRP4-201ENST00000378623 LOC400499M0QZD8 3231 aa9.63□□□□□ -0.87
LRP4-201ENST00000378623 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
LRP4-201ENST00000378623 HIVEP1P15822 2718 aa9.62□□□□□ -0.87
LRP4-201ENST00000378623 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
LRP4-201ENST00000378623 LAMA5O15230 3695 aa9.59□□□□□ -0.87
LRP4-201ENST00000378623 A6NN06 94 aa9.55□□□□□ -0.88
LRP4-201ENST00000378623 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
LRP4-201ENST00000378623 DCHS1Q96JQ0 3298 aa9.53□□□□□ -0.88
LRP4-201ENST00000378623 ITPR1Q14643 2758 aa9.52□□□□□ -0.89
LRP4-201ENST00000378623 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
LRP4-201ENST00000378623 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
LRP4-201ENST00000378623 CELSR2Q9HCU4 2923 aa9.46□□□□□ -0.89
LRP4-201ENST00000378623 DMXL1Q9Y485 3027 aa9.44□□□□□ -0.9
LRP4-201ENST00000378623 NBEAQ8NFP9 2946 aa9.43□□□□□ -0.9
LRP4-201ENST00000378623 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
LRP4-201ENST00000378623 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
LRP4-201ENST00000378623 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
LRP4-201ENST00000378623 FLNCQ14315 2725 aa9.38□□□□□ -0.91
LRP4-201ENST00000378623 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
LRP4-201ENST00000378623 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
LRP4-201ENST00000378623 RELNP78509 3460 aa9.27□□□□□ -0.93
LRP4-201ENST00000378623 CSMD1Q96PZ7 3565 aa9.27□□□□□ -0.93
LRP4-201ENST00000378623 KRTAP10-10P60014 251 aa9.27□□□□□ -0.93
LRP4-201ENST00000378623 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
LRP4-201ENST00000378623 DCHS2Q6V1P9 2916 aa9.21□□□□□ -0.93
LRP4-201ENST00000378623 SPENQ96T58 3664 aaKnown RBP9.21□□□□□ -0.94
LRP4-201ENST00000378623 NF1P21359 2839 aa9.18□□□□□ -0.94
LRP4-201ENST00000378623 P0C880 135 aa9.15□□□□□ -0.94
LRP4-201ENST00000378623 XP32Q5T750 250 aa9.15□□□□□ -0.94
LRP4-201ENST00000378623 PP632Q6XCG6 107 aa9.15□□□□□ -0.95
LRP4-201ENST00000378623 ZFHX3Q15911 3703 aa9.12□□□□□ -0.95
LRP4-201ENST00000378623 TENM4Q6N022 2769 aa9.12□□□□□ -0.95
LRP4-201ENST00000378623 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
LRP4-201ENST00000378623 NIPBLQ6KC79 2804 aaeCLIP9.09□□□□□ -0.95
LRP4-201ENST00000378623 SMG1Q96Q15 3661 aaKnown RBP9.06□□□□□ -0.96
LRP4-201ENST00000378623 H0YAA0 97 aa9.05□□□□□ -0.96
LRP4-201ENST00000378623 FBN2P35556 2912 aa9.04□□□□□ -0.96
LRP4-201ENST00000378623 KRTAP21-3Q3LHN1 58 aa9.02□□□□□ -0.97
LRP4-201ENST00000378623 DMDP11532 3685 aa9□□□□□ -0.97
LRP4-201ENST00000378623 PKD1L1Q8TDX9 2849 aa8.99□□□□□ -0.97
LRP4-201ENST00000378623 VWFP04275 2813 aa8.98□□□□□ -0.97
LRP4-201ENST00000378623 ZANQ9Y493 2812 aa8.9□□□□□ -0.98
LRP4-201ENST00000378623 CUBNO60494 3623 aa8.9□□□□□ -0.99
LRP4-201ENST00000378623 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
LRP4-201ENST00000378623 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
LRP4-201ENST00000378623 TENM3Q9P273 2699 aa8.82□□□□□ -1
LRP4-201ENST00000378623 SVEP1Q4LDE5 3571 aa8.8□□□□□ -1
LRP4-201ENST00000378623 TENM2Q9NT68 2774 aa8.79□□□□□ -1
LRP4-201ENST00000378623 PDZD2O15018 2839 aa8.76□□□□□ -1.01
LRP4-201ENST00000378623 TGP01266 2768 aa8.76□□□□□ -1.01
LRP4-201ENST00000378623 HRNRQ86YZ3 2850 aaPredicted RBP8.74□□□□□ -1.01
LRP4-201ENST00000378623 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
LRP4-201ENST00000378623 MXRA5Q9NR99 2828 aa8.66□□□□□ -1.02
LRP4-201ENST00000378623 KRTAP12-2P59991 146 aa8.64□□□□□ -1.03
LRP4-201ENST00000378623 MUC3AQ02505 3323 aa8.56□□□□□ -1.04
LRP4-201ENST00000378623 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
LRP4-201ENST00000378623 CSMD2Q7Z408 3487 aa8.5□□□□□ -1.05
LRP4-201ENST00000378623 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
LRP4-201ENST00000378623 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
LRP4-201ENST00000378623 KRTAP13-4Q3LI77 160 aa8.4□□□□□ -1.07
LRP4-201ENST00000378623 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
LRP4-201ENST00000378623 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
LRP4-201ENST00000378623 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
LRP4-201ENST00000378623 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
LRP4-201ENST00000378623 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
LRP4-201ENST00000378623 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
LRP4-201ENST00000378623 BSNQ9UPA5 3926 aa8.28□□□□□ -1.08
LRP4-201ENST00000378623 FBN1P35555 2871 aaKnown RBP8.21□□□□□ -1.1
LRP4-201ENST00000378623 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
LRP4-201ENST00000378623 AKAP9Q99996 3911 aa7.98□□□□□ -1.13
LRP4-201ENST00000378623 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
LRP4-201ENST00000378623 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
LRP4-201ENST00000378623 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
LRP4-201ENST00000378623 ANK3Q12955 4377 aaKnown RBP7.82□□□□□ -1.16
LRP4-201ENST00000378623 ZNF469Q96JG9 3925 aaPredicted RBP7.78□□□□□ -1.16
LRP4-201ENST00000378623 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
LRP4-201ENST00000378623 INE1O15225 51 aa7.74□□□□□ -1.17
LRP4-201ENST00000378623 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
LRP4-201ENST00000378623 HUWE1Q7Z6Z7 4374 aaKnown RBP7.64□□□□□ -1.19
LRP4-201ENST00000378623 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
LRP4-201ENST00000378623 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
LRP4-201ENST00000378623 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
LRP4-201ENST00000378623 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
LRP4-201ENST00000378623 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms