RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 LRBAP50851 2863 aa7.72□□□□□ -1.17
TRIM13-202ENST00000378182 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.17
TRIM13-202ENST00000378182 NDUFAF8A1L188 74 aa7.71□□□□□ -1.18
TRIM13-202ENST00000378182 APCP25054 2843 aa7.66□□□□□ -1.18
TRIM13-202ENST00000378182 DSPP15924 2871 aaKnown RBP7.65□□□□□ -1.19
TRIM13-202ENST00000378182 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
TRIM13-202ENST00000378182 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
TRIM13-202ENST00000378182 DMXL2Q8TDJ6 3036 aa7.62□□□□□ -1.19
TRIM13-202ENST00000378182 XP32Q5T750 250 aa7.58□□□□□ -1.2
TRIM13-202ENST00000378182 ASPMQ8IZT6 3477 aa7.58□□□□□ -1.2
TRIM13-202ENST00000378182 BOD1L1Q8NFC6 3051 aa7.57□□□□□ -1.2
TRIM13-202ENST00000378182 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
TRIM13-202ENST00000378182 ATMQ13315 3056 aa7.55□□□□□ -1.2
TRIM13-202ENST00000378182 MYO15AQ9UKN7 3530 aa7.55□□□□□ -1.2
TRIM13-202ENST00000378182 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
TRIM13-202ENST00000378182 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
TRIM13-202ENST00000378182 FRYLO94915 3013 aa7.52□□□□□ -1.21
TRIM13-202ENST00000378182 NBPF19A0A087WUL8 3843 aa7.51□□□□□ -1.21
TRIM13-202ENST00000378182 A6NN06 94 aa7.49□□□□□ -1.21
TRIM13-202ENST00000378182 P0C880 135 aa7.48□□□□□ -1.21
TRIM13-202ENST00000378182 WDFY3Q8IZQ1 3526 aa7.48□□□□□ -1.21
TRIM13-202ENST00000378182 EYSQ5T1H1 3165 aa7.47□□□□□ -1.21
TRIM13-202ENST00000378182 IGSF10Q6WRI0 2623 aa7.47□□□□□ -1.21
TRIM13-202ENST00000378182 NSD1Q96L73 2696 aaPredicted RBP7.47□□□□□ -1.21
TRIM13-202ENST00000378182 UTP20O75691 2785 aaKnown RBP7.47□□□□□ -1.21
TRIM13-202ENST00000378182 COL12A1Q99715 3063 aa7.45□□□□□ -1.22
TRIM13-202ENST00000378182 ITPR1Q14643 2758 aa7.41□□□□□ -1.22
TRIM13-202ENST00000378182 ADGRG4Q8IZF6 3080 aa7.41□□□□□ -1.22
TRIM13-202ENST00000378182 TACC2O95359 2948 aa7.41□□□□□ -1.22
TRIM13-202ENST00000378182 HIVEP1P15822 2718 aa7.4□□□□□ -1.22
TRIM13-202ENST00000378182 NBEAQ8NFP9 2946 aa7.4□□□□□ -1.23
TRIM13-202ENST00000378182 DCHS1Q96JQ0 3298 aa7.39□□□□□ -1.23
TRIM13-202ENST00000378182 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
TRIM13-202ENST00000378182 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
TRIM13-202ENST00000378182 FLNCQ14315 2725 aa7.34□□□□□ -1.23
TRIM13-202ENST00000378182 ZZEF1O43149 2961 aa7.34□□□□□ -1.23
TRIM13-202ENST00000378182 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
TRIM13-202ENST00000378182 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
TRIM13-202ENST00000378182 LAMA5O15230 3695 aa7.26□□□□□ -1.25
TRIM13-202ENST00000378182 H0YAA0 97 aa7.25□□□□□ -1.25
TRIM13-202ENST00000378182 ZFHX4Q86UP3 3567 aa7.23□□□□□ -1.25
TRIM13-202ENST00000378182 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
TRIM13-202ENST00000378182 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.26
TRIM13-202ENST00000378182 NIPBLQ6KC79 2804 aaeCLIP7.17□□□□□ -1.265e-7■■□□□ 13.4
TRIM13-202ENST00000378182 TNRC18O15417 2968 aaPredicted RBP7.17□□□□□ -1.26
TRIM13-202ENST00000378182 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.26
TRIM13-202ENST00000378182 CSMD1Q96PZ7 3565 aa7.14□□□□□ -1.27
TRIM13-202ENST00000378182 CELSR1Q9NYQ6 3014 aa7.11□□□□□ -1.27
TRIM13-202ENST00000378182 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
TRIM13-202ENST00000378182 DCHS2Q6V1P9 2916 aa7.06□□□□□ -1.28
TRIM13-202ENST00000378182 TENM4Q6N022 2769 aa7.05□□□□□ -1.28
TRIM13-202ENST00000378182 ZANQ9Y493 2812 aa7.04□□□□□ -1.28
TRIM13-202ENST00000378182 RELNP78509 3460 aa7.03□□□□□ -1.28
TRIM13-202ENST00000378182 KRTAP12-2P59991 146 aa7□□□□□ -1.29
TRIM13-202ENST00000378182 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
TRIM13-202ENST00000378182 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
TRIM13-202ENST00000378182 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
TRIM13-202ENST00000378182 NF1P21359 2839 aa6.93□□□□□ -1.3
TRIM13-202ENST00000378182 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
TRIM13-202ENST00000378182 FBN2P35556 2912 aa6.9□□□□□ -1.3
TRIM13-202ENST00000378182 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
TRIM13-202ENST00000378182 ZFHX3Q15911 3703 aa6.87□□□□□ -1.31
TRIM13-202ENST00000378182 SMG1Q96Q15 3661 aaKnown RBP6.84□□□□□ -1.31
TRIM13-202ENST00000378182 TGP01266 2768 aa6.81□□□□□ -1.32
TRIM13-202ENST00000378182 DMDP11532 3685 aa6.79□□□□□ -1.32
TRIM13-202ENST00000378182 HRNRQ86YZ3 2850 aaPredicted RBP6.78□□□□□ -1.32
TRIM13-202ENST00000378182 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
TRIM13-202ENST00000378182 VWFP04275 2813 aa6.77□□□□□ -1.33
TRIM13-202ENST00000378182 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
TRIM13-202ENST00000378182 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
TRIM13-202ENST00000378182 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
TRIM13-202ENST00000378182 CUBNO60494 3623 aa6.66□□□□□ -1.34
TRIM13-202ENST00000378182 MXRA5Q9NR99 2828 aa6.65□□□□□ -1.35
TRIM13-202ENST00000378182 PDZD2O15018 2839 aa6.64□□□□□ -1.35
TRIM13-202ENST00000378182 MUC3AQ02505 3323 aa6.58□□□□□ -1.36
TRIM13-202ENST00000378182 CSMD2Q7Z408 3487 aa6.56□□□□□ -1.36
TRIM13-202ENST00000378182 VPS13CQ709C8 3753 aa6.48□□□□□ -1.37
TRIM13-202ENST00000378182 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
TRIM13-202ENST00000378182 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
TRIM13-202ENST00000378182 TRRAPQ9Y4A5 3859 aa6.45□□□□□ -1.38
TRIM13-202ENST00000378182 ANK3Q12955 4377 aaKnown RBP6.44□□□□□ -1.38
TRIM13-202ENST00000378182 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
TRIM13-202ENST00000378182 BSNQ9UPA5 3926 aa6.4□□□□□ -1.38
TRIM13-202ENST00000378182 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
TRIM13-202ENST00000378182 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
TRIM13-202ENST00000378182 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
TRIM13-202ENST00000378182 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
TRIM13-202ENST00000378182 HUWE1Q7Z6Z7 4374 aaKnown RBP6.29□□□□□ -1.4
TRIM13-202ENST00000378182 MEGF8Q7Z7M0 2845 aa6.29□□□□□ -1.4
TRIM13-202ENST00000378182 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
TRIM13-202ENST00000378182 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
TRIM13-202ENST00000378182 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
TRIM13-202ENST00000378182 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
TRIM13-202ENST00000378182 ALMS1Q8TCU4 4167 aa6.21□□□□□ -1.41
TRIM13-202ENST00000378182 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
TRIM13-202ENST00000378182 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
TRIM13-202ENST00000378182 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
TRIM13-202ENST00000378182 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
TRIM13-202ENST00000378182 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
TRIM13-202ENST00000378182 INE1O15225 51 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms