RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LINC00472Q9H8W2 130 aa7.22□□□□□ -1.25
CKAP2-202ENST00000378034 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
CKAP2-202ENST00000378034 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
CKAP2-202ENST00000378034 ACYP1P07311 99 aa7.2□□□□□ -1.26
CKAP2-202ENST00000378034 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
CKAP2-202ENST00000378034 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
CKAP2-202ENST00000378034 J3KT08 172 aa7.17□□□□□ -1.26
CKAP2-202ENST00000378034 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.27
CKAP2-202ENST00000378034 DEFB116Q30KQ4 102 aa7.15□□□□□ -1.27
CKAP2-202ENST00000378034 RNF213Q63HN8 5207 aa7.13□□□□□ -1.27
CKAP2-202ENST00000378034 LINC00313P59037 77 aa7.11□□□□□ -1.27
CKAP2-202ENST00000378034 NREPQ16612 68 aa7.11□□□□□ -1.27
CKAP2-202ENST00000378034 Q75L30 129 aa7.11□□□□□ -1.27
CKAP2-202ENST00000378034 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
CKAP2-202ENST00000378034 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
CKAP2-202ENST00000378034 DSCR10P59022 87 aa7.1□□□□□ -1.27
CKAP2-202ENST00000378034 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
CKAP2-202ENST00000378034 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 ANAPC13Q9BS18 74 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 A0A0U1RQV1 116 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 C8orf87E5RJ46 101 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 NDUFB1O75438 58 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
CKAP2-202ENST00000378034 A8MUU9 505 aa7.07□□□□□ -1.28
CKAP2-202ENST00000378034 A8MWP4 228 aa7.06□□□□□ -1.28
CKAP2-202ENST00000378034 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
CKAP2-202ENST00000378034 KRTAP16-1A8MUX0 517 aa7.05□□□□□ -1.28
CKAP2-202ENST00000378034 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
CKAP2-202ENST00000378034 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
CKAP2-202ENST00000378034 MUC2Q02817 5179 aa7.04□□□□□ -1.28
CKAP2-202ENST00000378034 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
CKAP2-202ENST00000378034 Q6ZVQ6 151 aa7.02□□□□□ -1.29
CKAP2-202ENST00000378034 LINC00846Q9NV44 126 aa7.02□□□□□ -1.29
CKAP2-202ENST00000378034 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
CKAP2-202ENST00000378034 BPY2O14599 106 aa7□□□□□ -1.29
CKAP2-202ENST00000378034 UBL5Q9BZL1 73 aa7□□□□□ -1.29
CKAP2-202ENST00000378034 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
CKAP2-202ENST00000378034 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
CKAP2-202ENST00000378034 C8orf17Q9NRJ1 99 aa6.99□□□□□ -1.29
CKAP2-202ENST00000378034 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
CKAP2-202ENST00000378034 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.3
CKAP2-202ENST00000378034 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
CKAP2-202ENST00000378034 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
CKAP2-202ENST00000378034 K7EQZ3 153 aa6.95□□□□□ -1.3
CKAP2-202ENST00000378034 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
CKAP2-202ENST00000378034 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
CKAP2-202ENST00000378034 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
CKAP2-202ENST00000378034 ATOX1O00244 68 aa6.91□□□□□ -1.3
CKAP2-202ENST00000378034 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
CKAP2-202ENST00000378034 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.3
CKAP2-202ENST00000378034 UQCRQO14949 82 aa6.88□□□□□ -1.31
CKAP2-202ENST00000378034 CXCL6P80162 114 aa6.88□□□□□ -1.31
CKAP2-202ENST00000378034 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
CKAP2-202ENST00000378034 A0A087WVE0 104 aa6.88□□□□□ -1.31
CKAP2-202ENST00000378034 Q8N9L7 120 aa6.88□□□□□ -1.31
CKAP2-202ENST00000378034 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
CKAP2-202ENST00000378034 COX7CP15954 63 aa6.86□□□□□ -1.31
CKAP2-202ENST00000378034 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
CKAP2-202ENST00000378034 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
CKAP2-202ENST00000378034 LCE2CQ5TA81 110 aa6.84□□□□□ -1.32
CKAP2-202ENST00000378034 WFDC13Q8IUB5 93 aa6.82□□□□□ -1.32
CKAP2-202ENST00000378034 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
CKAP2-202ENST00000378034 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
CKAP2-202ENST00000378034 NDUFS5O43920 106 aa6.82□□□□□ -1.32
CKAP2-202ENST00000378034 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
CKAP2-202ENST00000378034 SPINK7P58062 85 aa6.77□□□□□ -1.33
CKAP2-202ENST00000378034 HRES1P13985 223 aa6.75□□□□□ -1.33
CKAP2-202ENST00000378034 MT1HP80294 61 aa6.74□□□□□ -1.33
CKAP2-202ENST00000378034 MPLKIPQ8TAP9 179 aa6.74□□□□□ -1.33
CKAP2-202ENST00000378034 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
CKAP2-202ENST00000378034 SMIM20Q8N5G0 67 aa6.73□□□□□ -1.33
CKAP2-202ENST00000378034 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.33
CKAP2-202ENST00000378034 TRAV7A0A075B6U4 112 aa6.71□□□□□ -1.34
CKAP2-202ENST00000378034 Q5W150 140 aa6.71□□□□□ -1.34
CKAP2-202ENST00000378034 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
CKAP2-202ENST00000378034 FAM236DA0A1B0GTK5 79 aa6.68□□□□□ -1.34
CKAP2-202ENST00000378034 FAM236CP0DP71 79 aa6.68□□□□□ -1.34
CKAP2-202ENST00000378034 TMEM258P61165 79 aa6.68□□□□□ -1.34
CKAP2-202ENST00000378034 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
CKAP2-202ENST00000378034 M0R2T5 61 aa6.65□□□□□ -1.34
CKAP2-202ENST00000378034 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
CKAP2-202ENST00000378034 IGKV2D-30A0A075B6S6 120 aa6.64□□□□□ -1.35
CKAP2-202ENST00000378034 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
CKAP2-202ENST00000378034 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
CKAP2-202ENST00000378034 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-202ENST00000378034 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
CKAP2-202ENST00000378034 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
CKAP2-202ENST00000378034 H7BZZ5 65 aa6.58□□□□□ -1.36
CKAP2-202ENST00000378034 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
CKAP2-202ENST00000378034 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
CKAP2-202ENST00000378034 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
CKAP2-202ENST00000378034 NDUFC1O43677 76 aa6.56□□□□□ -1.36
CKAP2-202ENST00000378034 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
CKAP2-202ENST00000378034 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
CKAP2-202ENST00000378034 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
CKAP2-202ENST00000378034 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
CKAP2-202ENST00000378034 CYP4F30PQ9H0H9 118 aa6.49□□□□□ -1.37
CKAP2-202ENST00000378034 H0Y9P7 68 aa6.49□□□□□ -1.37
CKAP2-202ENST00000378034 ATP5EP56381 51 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms