RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
POLR1E-201ENST00000377792 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
POLR1E-201ENST00000377792 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
POLR1E-201ENST00000377792 CDK2AP2O75956 126 aa6.49□□□□□ -1.37
POLR1E-201ENST00000377792 TP53AIP1Q9HCN2 124 aa6.49□□□□□ -1.37
POLR1E-201ENST00000377792 KRTAP10-2P60368 255 aa6.48□□□□□ -1.37
POLR1E-201ENST00000377792 CIRBP-AS1Q8TBR5 109 aa6.47□□□□□ -1.37
POLR1E-201ENST00000377792 A0A087X002 238 aa6.46□□□□□ -1.37
POLR1E-201ENST00000377792 Q1T7F1 81 aa6.46□□□□□ -1.37
POLR1E-201ENST00000377792 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.37
POLR1E-201ENST00000377792 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
POLR1E-201ENST00000377792 NDUFS5O43920 106 aa6.45□□□□□ -1.38
POLR1E-201ENST00000377792 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
POLR1E-201ENST00000377792 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
POLR1E-201ENST00000377792 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
POLR1E-201ENST00000377792 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
POLR1E-201ENST00000377792 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
POLR1E-201ENST00000377792 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
POLR1E-201ENST00000377792 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
POLR1E-201ENST00000377792 PCOTHQ58A44 107 aa6.42□□□□□ -1.38
POLR1E-201ENST00000377792 ALMS1Q8TCU4 4167 aa6.41□□□□□ -1.38
POLR1E-201ENST00000377792 Q6ZSA8 131 aa6.4□□□□□ -1.38
POLR1E-201ENST00000377792 KRTAP10-1P60331 282 aa6.4□□□□□ -1.39
POLR1E-201ENST00000377792 PSPHP1O15172 72 aa6.38□□□□□ -1.39
POLR1E-201ENST00000377792 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
POLR1E-201ENST00000377792 COA5Q86WW8 74 aa6.37□□□□□ -1.39
POLR1E-201ENST00000377792 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
POLR1E-201ENST00000377792 Q5W150 140 aa6.35□□□□□ -1.39
POLR1E-201ENST00000377792 J3QL48 77 aa6.34□□□□□ -1.39
POLR1E-201ENST00000377792 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
POLR1E-201ENST00000377792 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
POLR1E-201ENST00000377792 A8MUN3 132 aa6.34□□□□□ -1.39
POLR1E-201ENST00000377792 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.4
POLR1E-201ENST00000377792 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
POLR1E-201ENST00000377792 Q75L30 129 aa6.33□□□□□ -1.4
POLR1E-201ENST00000377792 PKD1P98161 4303 aa6.32□□□□□ -1.4
POLR1E-201ENST00000377792 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
POLR1E-201ENST00000377792 LIMD2Q9BT23 127 aa6.31□□□□□ -1.4
POLR1E-201ENST00000377792 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
POLR1E-201ENST00000377792 LINC00313P59037 77 aa6.3□□□□□ -1.4
POLR1E-201ENST00000377792 Q5VV11 94 aa6.3□□□□□ -1.4
POLR1E-201ENST00000377792 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
POLR1E-201ENST00000377792 HRES1P13985 223 aa6.28□□□□□ -1.4
POLR1E-201ENST00000377792 PRR15LQ9BU68 103 aa6.27□□□□□ -1.4
POLR1E-201ENST00000377792 LCA10Q71F78 164 aa6.27□□□□□ -1.41
POLR1E-201ENST00000377792 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
POLR1E-201ENST00000377792 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
POLR1E-201ENST00000377792 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
POLR1E-201ENST00000377792 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
POLR1E-201ENST00000377792 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
POLR1E-201ENST00000377792 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
POLR1E-201ENST00000377792 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
POLR1E-201ENST00000377792 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
POLR1E-201ENST00000377792 SACSQ9NZJ4 4579 aa6.21□□□□□ -1.41
POLR1E-201ENST00000377792 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.42
POLR1E-201ENST00000377792 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
POLR1E-201ENST00000377792 A8MU10 97 aa6.19□□□□□ -1.42
POLR1E-201ENST00000377792 SPINK1P00995 79 aa6.19□□□□□ -1.42
POLR1E-201ENST00000377792 ACYP2P14621 99 aa6.18□□□□□ -1.42
POLR1E-201ENST00000377792 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
POLR1E-201ENST00000377792 A6NED7 52 aa6.15□□□□□ -1.43
POLR1E-201ENST00000377792 C7orf65Q6ZTY9 151 aa6.14□□□□□ -1.43
POLR1E-201ENST00000377792 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
POLR1E-201ENST00000377792 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
POLR1E-201ENST00000377792 A6NN06 94 aa6.13□□□□□ -1.43
POLR1E-201ENST00000377792 RYR2Q92736 4967 aa6.12□□□□□ -1.43
POLR1E-201ENST00000377792 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
POLR1E-201ENST00000377792 SMR3BP02814 79 aaPredicted RBP6.11□□□□□ -1.43
POLR1E-201ENST00000377792 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
POLR1E-201ENST00000377792 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
POLR1E-201ENST00000377792 DYNC1H1Q14204 4646 aaKnown RBP6.09□□□□□ -1.43
POLR1E-201ENST00000377792 A0A1B0GVY2 172 aa6.09□□□□□ -1.44
POLR1E-201ENST00000377792 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.44
POLR1E-201ENST00000377792 SPINK7P58062 85 aa6.08□□□□□ -1.44
POLR1E-201ENST00000377792 RYR3Q15413 4870 aa6.07□□□□□ -1.44
POLR1E-201ENST00000377792 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
POLR1E-201ENST00000377792 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
POLR1E-201ENST00000377792 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
POLR1E-201ENST00000377792 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
POLR1E-201ENST00000377792 FAT1Q14517 4588 aa6.01□□□□□ -1.45
POLR1E-201ENST00000377792 A0A1B0GU69 56 aa5.99□□□□□ -1.45
POLR1E-201ENST00000377792 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
POLR1E-201ENST00000377792 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
POLR1E-201ENST00000377792 A8MUU9 505 aa5.98□□□□□ -1.45
POLR1E-201ENST00000377792 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
POLR1E-201ENST00000377792 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
POLR1E-201ENST00000377792 Q8N1X5 172 aa5.97□□□□□ -1.45
POLR1E-201ENST00000377792 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.47
POLR1E-201ENST00000377792 UQCR11O14957 56 aa5.88□□□□□ -1.47
POLR1E-201ENST00000377792 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
POLR1E-201ENST00000377792 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
POLR1E-201ENST00000377792 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
POLR1E-201ENST00000377792 FLG2Q5D862 2391 aaPredicted RBP5.83□□□□□ -1.48
POLR1E-201ENST00000377792 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
POLR1E-201ENST00000377792 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
POLR1E-201ENST00000377792 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
POLR1E-201ENST00000377792 Q5VSD8 79 aa5.79□□□□□ -1.48
POLR1E-201ENST00000377792 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
POLR1E-201ENST00000377792 TNXBP22105 4242 aa5.78□□□□□ -1.48
POLR1E-201ENST00000377792 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms