RNA–Protein interactions for RNA: ENST00000377126.3

KLF9-201, Transcript of Kruppel like factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF9, Length 5,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF9-201ENST00000377126 DMAC1Q96GE9 116 aa12.45□□□□□ -0.42
KLF9-201ENST00000377126 DCHS2Q6V1P9 2916 aa12.45□□□□□ -0.42
KLF9-201ENST00000377126 COX6B2Q6YFQ2 88 aa12.44□□□□□ -0.42
KLF9-201ENST00000377126 A0A087X002 238 aa12.43□□□□□ -0.42
KLF9-201ENST00000377126 NOTCH2NLQ7Z3S9 236 aa12.43□□□□□ -0.42
KLF9-201ENST00000377126 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
KLF9-201ENST00000377126 RELNP78509 3460 aa12.38□□□□□ -0.43
KLF9-201ENST00000377126 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
KLF9-201ENST00000377126 Q6ZSA8 131 aa12.35□□□□□ -0.43
KLF9-201ENST00000377126 ASB16-AS1Q495Z4 193 aa12.34□□□□□ -0.43
KLF9-201ENST00000377126 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
KLF9-201ENST00000377126 LAMA5O15230 3695 aa12.24□□□□□ -0.45
KLF9-201ENST00000377126 DMDP11532 3685 aa12.23□□□□□ -0.45
KLF9-201ENST00000377126 ASPMQ8IZT6 3477 aa12.21□□□□□ -0.45
KLF9-201ENST00000377126 ADM2Q7Z4H4 148 aa12.21□□□□□ -0.46
KLF9-201ENST00000377126 S4R3F8 94 aa12.2□□□□□ -0.46
KLF9-201ENST00000377126 DCHS1Q96JQ0 3298 aa12.19□□□□□ -0.46
KLF9-201ENST00000377126 Q5VSD8 79 aa12.18□□□□□ -0.46
KLF9-201ENST00000377126 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
KLF9-201ENST00000377126 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
KLF9-201ENST00000377126 SPATA8Q6RVD6 105 aa12.14□□□□□ -0.47
KLF9-201ENST00000377126 RPS29P62273 56 aaKnown RBP12.09□□□□□ -0.47
KLF9-201ENST00000377126 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
KLF9-201ENST00000377126 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
KLF9-201ENST00000377126 H1FX-AS1Q4G0G2 97 aa12.03□□□□□ -0.48
KLF9-201ENST00000377126 LUZP6Q538Z0 58 aa12.03□□□□□ -0.48
KLF9-201ENST00000377126 SMG1Q96Q15 3661 aaKnown RBP11.97□□□□□ -0.49
KLF9-201ENST00000377126 RPL37P61927 97 aaKnown RBP11.93□□□□□ -0.5
KLF9-201ENST00000377126 KRTAP25-1Q3LHN0 102 aa11.93□□□□□ -0.5
KLF9-201ENST00000377126 CELSR1Q9NYQ6 3014 aa11.93□□□□□ -0.5
KLF9-201ENST00000377126 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
KLF9-201ENST00000377126 ROMO1P60602 79 aa11.92□□□□□ -0.5
KLF9-201ENST00000377126 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
KLF9-201ENST00000377126 SEC61BP60468 96 aaKnown RBP11.87□□□□□ -0.51
KLF9-201ENST00000377126 CAMK2N1Q7Z7J9 78 aa11.87□□□□□ -0.51
KLF9-201ENST00000377126 PDZD2O15018 2839 aa11.84□□□□□ -0.51
KLF9-201ENST00000377126 KRTAP16-1A8MUX0 517 aa11.83□□□□□ -0.52
KLF9-201ENST00000377126 R4GN34 69 aa11.83□□□□□ -0.52
KLF9-201ENST00000377126 A0A0A0MQY5 61 aa11.81□□□□□ -0.52
KLF9-201ENST00000377126 TENM1Q9UKZ4 2725 aa11.75□□□□□ -0.53
KLF9-201ENST00000377126 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
KLF9-201ENST00000377126 KRTAP1-4P0C5Y4 121 aa11.73□□□□□ -0.53
KLF9-201ENST00000377126 KRTAP21-3Q3LHN1 58 aa11.68□□□□□ -0.54
KLF9-201ENST00000377126 A8MUU9 505 aa11.68□□□□□ -0.54
KLF9-201ENST00000377126 M0QZ58 72 aa11.67□□□□□ -0.54
KLF9-201ENST00000377126 NDUFAF8A1L188 74 aa11.66□□□□□ -0.54
KLF9-201ENST00000377126 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.55
KLF9-201ENST00000377126 M0R2T5 61 aa11.64□□□□□ -0.55
KLF9-201ENST00000377126 SVEP1Q4LDE5 3571 aa11.62□□□□□ -0.55
KLF9-201ENST00000377126 VWFP04275 2813 aa11.59□□□□□ -0.55
KLF9-201ENST00000377126 OTOGQ6ZRI0 2925 aa11.51□□□□□ -0.57
KLF9-201ENST00000377126 NBPF19A0A087WUL8 3843 aa11.5□□□□□ -0.57
KLF9-201ENST00000377126 SPENQ96T58 3664 aaKnown RBP11.5□□□□□ -0.57
KLF9-201ENST00000377126 BSNQ9UPA5 3926 aa11.43□□□□□ -0.58
KLF9-201ENST00000377126 FBN1P35555 2871 aaKnown RBP11.39□□□□□ -0.59
KLF9-201ENST00000377126 TENM2Q9NT68 2774 aa11.37□□□□□ -0.59
KLF9-201ENST00000377126 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
KLF9-201ENST00000377126 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
KLF9-201ENST00000377126 TGP01266 2768 aa11.29□□□□□ -0.6
KLF9-201ENST00000377126 XP32Q5T750 250 aa11.28□□□□□ -0.6
KLF9-201ENST00000377126 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
KLF9-201ENST00000377126 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
KLF9-201ENST00000377126 CUBNO60494 3623 aa11.19□□□□□ -0.62
KLF9-201ENST00000377126 H0YAA0 97 aa11.18□□□□□ -0.62
KLF9-201ENST00000377126 PLAC4Q8WY50 150 aa11.13□□□□□ -0.63
KLF9-201ENST00000377126 ZFHX3Q15911 3703 aa11.11□□□□□ -0.63
KLF9-201ENST00000377126 C10orf95Q9H7T3 257 aa11.06□□□□□ -0.64
KLF9-201ENST00000377126 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
KLF9-201ENST00000377126 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.64
KLF9-201ENST00000377126 TPRXLQ17RH7 258 aa10.99□□□□□ -0.65
KLF9-201ENST00000377126 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
KLF9-201ENST00000377126 P0C880 135 aa10.84□□□□□ -0.67
KLF9-201ENST00000377126 FBN3Q75N90 2809 aa10.83□□□□□ -0.68
KLF9-201ENST00000377126 VPS13CQ709C8 3753 aa10.79□□□□□ -0.68
KLF9-201ENST00000377126 TNP1P09430 55 aa10.77□□□□□ -0.69
KLF9-201ENST00000377126 MEGF8Q7Z7M0 2845 aa10.71□□□□□ -0.69
KLF9-201ENST00000377126 SRRM2Q9UQ35 2752 aaKnown RBP10.7□□□□□ -0.7
KLF9-201ENST00000377126 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
KLF9-201ENST00000377126 PP632Q6XCG6 107 aa10.62□□□□□ -0.71
KLF9-201ENST00000377126 HUWE1Q7Z6Z7 4374 aaKnown RBP10.59□□□□□ -0.71
KLF9-201ENST00000377126 ZNF469Q96JG9 3925 aaPredicted RBP10.49□□□□□ -0.73
KLF9-201ENST00000377126 KRTAP12-2P59991 146 aa10.45□□□□□ -0.74
KLF9-201ENST00000377126 AKAP9Q99996 3911 aa10.4□□□□□ -0.74
KLF9-201ENST00000377126 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
KLF9-201ENST00000377126 KRTAP12-1P59990 96 aa10.33□□□□□ -0.76
KLF9-201ENST00000377126 KRTAP10-6P60371 365 aaPredicted RBP10.3□□□□□ -0.76
KLF9-201ENST00000377126 KRTAP10-10P60014 251 aa10.27□□□□□ -0.77
KLF9-201ENST00000377126 KRTAP13-4Q3LI77 160 aa10.26□□□□□ -0.77
KLF9-201ENST00000377126 KRTAP10-4P60372 401 aaPredicted RBP10.22□□□□□ -0.77
KLF9-201ENST00000377126 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
KLF9-201ENST00000377126 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
KLF9-201ENST00000377126 KRTAP15-1Q3LI76 137 aa10.1□□□□□ -0.79
KLF9-201ENST00000377126 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
KLF9-201ENST00000377126 CSMD3Q7Z407 3707 aa10.05□□□□□ -0.8
KLF9-201ENST00000377126 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
KLF9-201ENST00000377126 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.82
KLF9-201ENST00000377126 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
KLF9-201ENST00000377126 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
KLF9-201ENST00000377126 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
KLF9-201ENST00000377126 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms