RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 NF1P21359 2839 aa7.69□□□□□ -1.18
DFFA-202ENST00000377038 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
DFFA-202ENST00000377038 A0A1B0GU33 70 aa7.67□□□□□ -1.18
DFFA-202ENST00000377038 KRTAP13-2Q52LG2 175 aa7.67□□□□□ -1.18
DFFA-202ENST00000377038 Q1T7F1 81 aa7.66□□□□□ -1.18
DFFA-202ENST00000377038 NOTCH2NLQ7Z3S9 236 aa7.65□□□□□ -1.18
DFFA-202ENST00000377038 KRTAP29-1A8MX34 341 aaPredicted RBP7.64□□□□□ -1.19
DFFA-202ENST00000377038 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
DFFA-202ENST00000377038 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
DFFA-202ENST00000377038 DCHS1Q96JQ0 3298 aa7.62□□□□□ -1.19
DFFA-202ENST00000377038 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
DFFA-202ENST00000377038 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
DFFA-202ENST00000377038 ZFHX4Q86UP3 3567 aa7.59□□□□□ -1.19
DFFA-202ENST00000377038 DMBT1Q9UGM3 2413 aaPredicted RBP7.59□□□□□ -1.19
DFFA-202ENST00000377038 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
DFFA-202ENST00000377038 MXRA5Q9NR99 2828 aa7.57□□□□□ -1.2
DFFA-202ENST00000377038 Q75L30 129 aa7.55□□□□□ -1.2
DFFA-202ENST00000377038 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
DFFA-202ENST00000377038 PDZD2O15018 2839 aa7.54□□□□□ -1.2
DFFA-202ENST00000377038 R4GN34 69 aa7.53□□□□□ -1.2
DFFA-202ENST00000377038 Q5XG85 94 aa7.52□□□□□ -1.21
DFFA-202ENST00000377038 NBPF19A0A087WUL8 3843 aa7.5□□□□□ -1.21
DFFA-202ENST00000377038 CELSR1Q9NYQ6 3014 aa7.47□□□□□ -1.21
DFFA-202ENST00000377038 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
DFFA-202ENST00000377038 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
DFFA-202ENST00000377038 Q5VV11 94 aa7.43□□□□□ -1.22
DFFA-202ENST00000377038 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
DFFA-202ENST00000377038 M0QZ58 72 aa7.41□□□□□ -1.22
DFFA-202ENST00000377038 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
DFFA-202ENST00000377038 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.23
DFFA-202ENST00000377038 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
DFFA-202ENST00000377038 TENM2Q9NT68 2774 aa7.39□□□□□ -1.23
DFFA-202ENST00000377038 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
DFFA-202ENST00000377038 TENM3Q9P273 2699 aa7.37□□□□□ -1.23
DFFA-202ENST00000377038 LCA10Q71F78 164 aa7.36□□□□□ -1.23
DFFA-202ENST00000377038 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
DFFA-202ENST00000377038 SMG1Q96Q15 3661 aaKnown RBP7.34□□□□□ -1.23
DFFA-202ENST00000377038 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
DFFA-202ENST00000377038 A8MUU9 505 aa7.29□□□□□ -1.24
DFFA-202ENST00000377038 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
DFFA-202ENST00000377038 ZFHX3Q15911 3703 aa7.26□□□□□ -1.25
DFFA-202ENST00000377038 CSMD1Q96PZ7 3565 aa7.26□□□□□ -1.25
DFFA-202ENST00000377038 ANK3Q12955 4377 aaKnown RBP7.24□□□□□ -1.25
DFFA-202ENST00000377038 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
DFFA-202ENST00000377038 A0A1B0GVY2 172 aa7.23□□□□□ -1.25
DFFA-202ENST00000377038 XP32Q5T750 250 aa7.22□□□□□ -1.25
DFFA-202ENST00000377038 PKD1L1Q8TDX9 2849 aa7.21□□□□□ -1.25
DFFA-202ENST00000377038 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.26
DFFA-202ENST00000377038 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
DFFA-202ENST00000377038 FBN1P35555 2871 aaKnown RBP7.18□□□□□ -1.26
DFFA-202ENST00000377038 ROMO1P60602 79 aa7.16□□□□□ -1.26
DFFA-202ENST00000377038 CSMD2Q7Z408 3487 aa7.16□□□□□ -1.26
DFFA-202ENST00000377038 BSNQ9UPA5 3926 aa7.15□□□□□ -1.26
DFFA-202ENST00000377038 SVEP1Q4LDE5 3571 aa7.15□□□□□ -1.26
DFFA-202ENST00000377038 VWFP04275 2813 aa7.13□□□□□ -1.27
DFFA-202ENST00000377038 LUZP6Q538Z0 58 aa7.13□□□□□ -1.27
DFFA-202ENST00000377038 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
DFFA-202ENST00000377038 A8MU10 97 aa7.09□□□□□ -1.27
DFFA-202ENST00000377038 TGP01266 2768 aa7.08□□□□□ -1.28
DFFA-202ENST00000377038 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
DFFA-202ENST00000377038 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
DFFA-202ENST00000377038 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
DFFA-202ENST00000377038 TRRAPQ9Y4A5 3859 aa6.96□□□□□ -1.3
DFFA-202ENST00000377038 CUBNO60494 3623 aa6.87□□□□□ -1.31
DFFA-202ENST00000377038 A6NN06 94 aa6.81□□□□□ -1.32
DFFA-202ENST00000377038 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
DFFA-202ENST00000377038 TNP1P09430 55 aa6.78□□□□□ -1.32
DFFA-202ENST00000377038 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
DFFA-202ENST00000377038 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
DFFA-202ENST00000377038 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
DFFA-202ENST00000377038 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
DFFA-202ENST00000377038 P0C880 135 aa6.69□□□□□ -1.34
DFFA-202ENST00000377038 H0YAA0 97 aa6.68□□□□□ -1.34
DFFA-202ENST00000377038 MEGF8Q7Z7M0 2845 aa6.65□□□□□ -1.34
DFFA-202ENST00000377038 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
DFFA-202ENST00000377038 AKAP9Q99996 3911 aa6.61□□□□□ -1.35
DFFA-202ENST00000377038 ZNF469Q96JG9 3925 aaPredicted RBP6.61□□□□□ -1.35
DFFA-202ENST00000377038 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
DFFA-202ENST00000377038 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
DFFA-202ENST00000377038 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
DFFA-202ENST00000377038 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
DFFA-202ENST00000377038 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
DFFA-202ENST00000377038 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
DFFA-202ENST00000377038 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
DFFA-202ENST00000377038 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
DFFA-202ENST00000377038 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
DFFA-202ENST00000377038 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
DFFA-202ENST00000377038 DNAH9Q9NYC9 4486 aa6.47□□□□□ -1.37
DFFA-202ENST00000377038 H3BS24 57 aa6.41□□□□□ -1.38
DFFA-202ENST00000377038 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
DFFA-202ENST00000377038 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
DFFA-202ENST00000377038 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
DFFA-202ENST00000377038 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
DFFA-202ENST00000377038 DNHD1Q96M86 4753 aa6.24□□□□□ -1.41
DFFA-202ENST00000377038 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
DFFA-202ENST00000377038 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
DFFA-202ENST00000377038 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.41
DFFA-202ENST00000377038 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
DFFA-202ENST00000377038 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
DFFA-202ENST00000377038 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms