RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZNF861PO60384 105 aa7.86□□□□□ -1.15
ACTN1-202ENST00000376839 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
ACTN1-202ENST00000376839 FBN3Q75N90 2809 aa7.85□□□□□ -1.15
ACTN1-202ENST00000376839 MRPL34Q9BQ48 92 aaKnown RBP7.85□□□□□ -1.15
ACTN1-202ENST00000376839 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
ACTN1-202ENST00000376839 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
ACTN1-202ENST00000376839 TGP01266 2768 aa7.82□□□□□ -1.16
ACTN1-202ENST00000376839 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
ACTN1-202ENST00000376839 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
ACTN1-202ENST00000376839 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
ACTN1-202ENST00000376839 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
ACTN1-202ENST00000376839 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
ACTN1-202ENST00000376839 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
ACTN1-202ENST00000376839 HRES1P13985 223 aa7.77□□□□□ -1.17
ACTN1-202ENST00000376839 Q5W150 140 aa7.77□□□□□ -1.17
ACTN1-202ENST00000376839 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
ACTN1-202ENST00000376839 Q75L30 129 aa7.77□□□□□ -1.17
ACTN1-202ENST00000376839 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
ACTN1-202ENST00000376839 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
ACTN1-202ENST00000376839 PMAIP1Q13794 54 aa7.75□□□□□ -1.17
ACTN1-202ENST00000376839 LCA10Q71F78 164 aa7.74□□□□□ -1.17
ACTN1-202ENST00000376839 DNAH5Q8TE73 4624 aa7.74□□□□□ -1.17
ACTN1-202ENST00000376839 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
ACTN1-202ENST00000376839 A6NED7 52 aa7.73□□□□□ -1.17
ACTN1-202ENST00000376839 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
ACTN1-202ENST00000376839 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
ACTN1-202ENST00000376839 SPTSSBQ8NFR3 76 aa7.69□□□□□ -1.18
ACTN1-202ENST00000376839 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
ACTN1-202ENST00000376839 SSBP3-AS1Q7Z2R9 100 aa7.65□□□□□ -1.18
ACTN1-202ENST00000376839 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.19
ACTN1-202ENST00000376839 SPINK7P58062 85 aa7.64□□□□□ -1.19
ACTN1-202ENST00000376839 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
ACTN1-202ENST00000376839 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
ACTN1-202ENST00000376839 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
ACTN1-202ENST00000376839 LY6G6CO95867 125 aa7.63□□□□□ -1.19
ACTN1-202ENST00000376839 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
ACTN1-202ENST00000376839 RETNLBQ9BQ08 111 aa7.63□□□□□ -1.19
ACTN1-202ENST00000376839 DNHD1Q96M86 4753 aa7.62□□□□□ -1.19
ACTN1-202ENST00000376839 SEC61GP60059 68 aa7.61□□□□□ -1.19
ACTN1-202ENST00000376839 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
ACTN1-202ENST00000376839 LINC00313P59037 77 aa7.61□□□□□ -1.19
ACTN1-202ENST00000376839 ACYP2P14621 99 aa7.58□□□□□ -1.2
ACTN1-202ENST00000376839 PKD1P98161 4303 aa7.58□□□□□ -1.2
ACTN1-202ENST00000376839 A6NN06 94 aa7.57□□□□□ -1.2
ACTN1-202ENST00000376839 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
ACTN1-202ENST00000376839 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
ACTN1-202ENST00000376839 KTN1-AS1Q86SY8 53 aa7.55□□□□□ -1.2
ACTN1-202ENST00000376839 FAT2Q9NYQ8 4349 aa7.55□□□□□ -1.2
ACTN1-202ENST00000376839 HYDINQ4G0P3 5121 aa7.54□□□□□ -1.2
ACTN1-202ENST00000376839 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
ACTN1-202ENST00000376839 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
ACTN1-202ENST00000376839 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
ACTN1-202ENST00000376839 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
ACTN1-202ENST00000376839 Q6ZSA8 131 aa7.51□□□□□ -1.21
ACTN1-202ENST00000376839 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
ACTN1-202ENST00000376839 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
ACTN1-202ENST00000376839 A0A1B0GU69 56 aa7.43□□□□□ -1.22
ACTN1-202ENST00000376839 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
ACTN1-202ENST00000376839 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
ACTN1-202ENST00000376839 PLA2G1BP04054 148 aaKnown RBP7.4□□□□□ -1.22
ACTN1-202ENST00000376839 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
ACTN1-202ENST00000376839 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
ACTN1-202ENST00000376839 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
ACTN1-202ENST00000376839 SPINK1P00995 79 aa7.34□□□□□ -1.23
ACTN1-202ENST00000376839 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
ACTN1-202ENST00000376839 Q8N1X5 172 aa7.31□□□□□ -1.24
ACTN1-202ENST00000376839 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
ACTN1-202ENST00000376839 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
ACTN1-202ENST00000376839 UQCR11O14957 56 aa7.29□□□□□ -1.24
ACTN1-202ENST00000376839 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
ACTN1-202ENST00000376839 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
ACTN1-202ENST00000376839 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
ACTN1-202ENST00000376839 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
ACTN1-202ENST00000376839 FAT1Q14517 4588 aa7.24□□□□□ -1.25
ACTN1-202ENST00000376839 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.25
ACTN1-202ENST00000376839 C9orf92A6NGG3 77 aa7.21□□□□□ -1.26
ACTN1-202ENST00000376839 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
ACTN1-202ENST00000376839 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
ACTN1-202ENST00000376839 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
ACTN1-202ENST00000376839 A8MUU9 505 aa7.14□□□□□ -1.27
ACTN1-202ENST00000376839 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
ACTN1-202ENST00000376839 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
ACTN1-202ENST00000376839 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.27
ACTN1-202ENST00000376839 H0YAA0 97 aa7.08□□□□□ -1.28
ACTN1-202ENST00000376839 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
ACTN1-202ENST00000376839 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
ACTN1-202ENST00000376839 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
ACTN1-202ENST00000376839 A0A1B0GU33 70 aa7□□□□□ -1.29
ACTN1-202ENST00000376839 FLG2Q5D862 2391 aaPredicted RBP7□□□□□ -1.29
ACTN1-202ENST00000376839 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
ACTN1-202ENST00000376839 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
ACTN1-202ENST00000376839 LRP1Q07954 4544 aaKnown RBP6.96□□□□□ -1.29
ACTN1-202ENST00000376839 RYR2Q92736 4967 aa6.95□□□□□ -1.3
ACTN1-202ENST00000376839 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
ACTN1-202ENST00000376839 TNXBP22105 4242 aa6.94□□□□□ -1.3
ACTN1-202ENST00000376839 HSPG2P98160 4391 aa6.93□□□□□ -1.3
ACTN1-202ENST00000376839 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.31
ACTN1-202ENST00000376839 MYCBP2O75592 4640 aa6.87□□□□□ -1.31
ACTN1-202ENST00000376839 KRTAP21-3Q3LHN1 58 aa6.84□□□□□ -1.31
ACTN1-202ENST00000376839 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms