RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
PPP1R3F-202ENST00000376188 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
PPP1R3F-202ENST00000376188 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
PPP1R3F-202ENST00000376188 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
PPP1R3F-202ENST00000376188 A0A087X002 238 aa11.01□□□□□ -0.65
PPP1R3F-202ENST00000376188 NDUFS5O43920 106 aa11.01□□□□□ -0.65
PPP1R3F-202ENST00000376188 PRR4Q16378 134 aa11□□□□□ -0.65
PPP1R3F-202ENST00000376188 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
PPP1R3F-202ENST00000376188 NOTCH2NLQ7Z3S9 236 aa10.99□□□□□ -0.65
PPP1R3F-202ENST00000376188 LRP1BQ9NZR2 4599 aa10.99□□□□□ -0.65
PPP1R3F-202ENST00000376188 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
PPP1R3F-202ENST00000376188 KRTAP1-4P0C5Y4 121 aa10.94□□□□□ -0.66
PPP1R3F-202ENST00000376188 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
PPP1R3F-202ENST00000376188 VPS13BQ7Z7G8 4022 aa10.89□□□□□ -0.67
PPP1R3F-202ENST00000376188 IGLV7-46A0A075B6I9 117 aa10.88□□□□□ -0.67
PPP1R3F-202ENST00000376188 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
PPP1R3F-202ENST00000376188 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
PPP1R3F-202ENST00000376188 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
PPP1R3F-202ENST00000376188 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
PPP1R3F-202ENST00000376188 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
PPP1R3F-202ENST00000376188 LINC00313P59037 77 aa10.85□□□□□ -0.67
PPP1R3F-202ENST00000376188 PLA2G1BP04054 148 aaKnown RBP10.84□□□□□ -0.67
PPP1R3F-202ENST00000376188 Q1T7F1 81 aa10.84□□□□□ -0.67
PPP1R3F-202ENST00000376188 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
PPP1R3F-202ENST00000376188 C4orf48Q5BLP8 95 aa10.81□□□□□ -0.68
PPP1R3F-202ENST00000376188 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
PPP1R3F-202ENST00000376188 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
PPP1R3F-202ENST00000376188 Q5W150 140 aa10.79□□□□□ -0.68
PPP1R3F-202ENST00000376188 PKHD1P08F94 4074 aa10.78□□□□□ -0.68
PPP1R3F-202ENST00000376188 SPINK1P00995 79 aa10.77□□□□□ -0.69
PPP1R3F-202ENST00000376188 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
PPP1R3F-202ENST00000376188 V9GYY9 64 aa10.76□□□□□ -0.69
PPP1R3F-202ENST00000376188 FAM229AH3BQW9 127 aa10.74□□□□□ -0.69
PPP1R3F-202ENST00000376188 COA5Q86WW8 74 aa10.74□□□□□ -0.69
PPP1R3F-202ENST00000376188 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
PPP1R3F-202ENST00000376188 KRTAP16-1A8MUX0 517 aa10.7□□□□□ -0.7
PPP1R3F-202ENST00000376188 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
PPP1R3F-202ENST00000376188 DYNC1H1Q14204 4646 aaKnown RBP10.68□□□□□ -0.7
PPP1R3F-202ENST00000376188 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
PPP1R3F-202ENST00000376188 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
PPP1R3F-202ENST00000376188 PRO0628Q9UI54 55 aa10.67□□□□□ -0.7
PPP1R3F-202ENST00000376188 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
PPP1R3F-202ENST00000376188 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
PPP1R3F-202ENST00000376188 PSPHP1O15172 72 aa10.63□□□□□ -0.71
PPP1R3F-202ENST00000376188 BRK1Q8WUW1 75 aa10.63□□□□□ -0.71
PPP1R3F-202ENST00000376188 HRES1P13985 223 aa10.6□□□□□ -0.71
PPP1R3F-202ENST00000376188 IGKV2-30P06310 120 aa10.59□□□□□ -0.71
PPP1R3F-202ENST00000376188 RETNLBQ9BQ08 111 aa10.59□□□□□ -0.71
PPP1R3F-202ENST00000376188 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
PPP1R3F-202ENST00000376188 A8MUN3 132 aa10.57□□□□□ -0.72
PPP1R3F-202ENST00000376188 KRTAP10-4P60372 401 aaPredicted RBP10.57□□□□□ -0.72
PPP1R3F-202ENST00000376188 RYR2Q92736 4967 aa10.55□□□□□ -0.72
PPP1R3F-202ENST00000376188 ACYP2P14621 99 aa10.53□□□□□ -0.72
PPP1R3F-202ENST00000376188 Q5VV11 94 aa10.52□□□□□ -0.73
PPP1R3F-202ENST00000376188 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
PPP1R3F-202ENST00000376188 PRR15LQ9BU68 103 aa10.51□□□□□ -0.73
PPP1R3F-202ENST00000376188 FAT1Q14517 4588 aa10.5□□□□□ -0.73
PPP1R3F-202ENST00000376188 PKHD1L1Q86WI1 4243 aa10.47□□□□□ -0.73
PPP1R3F-202ENST00000376188 LINC01558Q9Y6Z2 57 aa10.47□□□□□ -0.73
PPP1R3F-202ENST00000376188 IGKV2D-30A0A075B6S6 120 aa10.46□□□□□ -0.74
PPP1R3F-202ENST00000376188 Q75L30 129 aa10.43□□□□□ -0.74
PPP1R3F-202ENST00000376188 CHKB-CPT1BH3BT56 60 aa10.43□□□□□ -0.74
PPP1R3F-202ENST00000376188 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
PPP1R3F-202ENST00000376188 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
PPP1R3F-202ENST00000376188 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
PPP1R3F-202ENST00000376188 A8MUU9 505 aa10.33□□□□□ -0.76
PPP1R3F-202ENST00000376188 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
PPP1R3F-202ENST00000376188 A6NED7 52 aa10.31□□□□□ -0.76
PPP1R3F-202ENST00000376188 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
PPP1R3F-202ENST00000376188 Q5VSD8 79 aa10.23□□□□□ -0.77
PPP1R3F-202ENST00000376188 A8MU10 97 aa10.21□□□□□ -0.78
PPP1R3F-202ENST00000376188 LCA10Q71F78 164 aa10.19□□□□□ -0.78
PPP1R3F-202ENST00000376188 CDC42SE1Q9NRR8 79 aa10.19□□□□□ -0.78
PPP1R3F-202ENST00000376188 Q8N1X5 172 aa10.19□□□□□ -0.78
PPP1R3F-202ENST00000376188 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
PPP1R3F-202ENST00000376188 HSPG2P98160 4391 aa10.17□□□□□ -0.78
PPP1R3F-202ENST00000376188 SPINK7P58062 85 aa10.16□□□□□ -0.78
PPP1R3F-202ENST00000376188 A0A1B0GU69 56 aa10.15□□□□□ -0.79
PPP1R3F-202ENST00000376188 TNXBP22105 4242 aa10.14□□□□□ -0.79
PPP1R3F-202ENST00000376188 ATP11AUNQ6ZP68 121 aa10.12□□□□□ -0.79
PPP1R3F-202ENST00000376188 FAT3Q8TDW7 4589 aa10.09□□□□□ -0.79
PPP1R3F-202ENST00000376188 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
PPP1R3F-202ENST00000376188 RYR1P21817 5038 aa10.08□□□□□ -0.8
PPP1R3F-202ENST00000376188 RYR3Q15413 4870 aa10.08□□□□□ -0.8
PPP1R3F-202ENST00000376188 SPTSSBQ8NFR3 76 aa10.07□□□□□ -0.8
PPP1R3F-202ENST00000376188 PMAIP1Q13794 54 aa10.05□□□□□ -0.8
PPP1R3F-202ENST00000376188 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
PPP1R3F-202ENST00000376188 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
PPP1R3F-202ENST00000376188 UQCR11O14957 56 aa9.95□□□□□ -0.82
PPP1R3F-202ENST00000376188 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
PPP1R3F-202ENST00000376188 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
PPP1R3F-202ENST00000376188 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
PPP1R3F-202ENST00000376188 SEC61GP60059 68 aa9.93□□□□□ -0.82
PPP1R3F-202ENST00000376188 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
PPP1R3F-202ENST00000376188 A6NN06 94 aa9.9□□□□□ -0.82
PPP1R3F-202ENST00000376188 MT1HL1P0DM35 61 aa9.9□□□□□ -0.83
PPP1R3F-202ENST00000376188 XP32Q5T750 250 aa9.9□□□□□ -0.83
PPP1R3F-202ENST00000376188 KIAA1109Q2LD37 5005 aa9.89□□□□□ -0.83
PPP1R3F-202ENST00000376188 MIR22HGQ0VDD5 57 aa9.87□□□□□ -0.83
PPP1R3F-202ENST00000376188 KTN1-AS1Q86SY8 53 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms