RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MYO15AQ9UKN7 3530 aa7.96□□□□□ -1.13
C9orf47-203ENST00000375851 Q5VV11 94 aa7.95□□□□□ -1.14
C9orf47-203ENST00000375851 OXTP01178 125 aa7.95□□□□□ -1.14
C9orf47-203ENST00000375851 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
C9orf47-203ENST00000375851 S4R3F8 94 aa7.92□□□□□ -1.14
C9orf47-203ENST00000375851 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
C9orf47-203ENST00000375851 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
C9orf47-203ENST00000375851 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
C9orf47-203ENST00000375851 M0R2T5 61 aa7.88□□□□□ -1.15
C9orf47-203ENST00000375851 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
C9orf47-203ENST00000375851 MXRA5Q9NR99 2828 aa7.87□□□□□ -1.15
C9orf47-203ENST00000375851 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
C9orf47-203ENST00000375851 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
C9orf47-203ENST00000375851 DCHS1Q96JQ0 3298 aa7.8□□□□□ -1.16
C9orf47-203ENST00000375851 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
C9orf47-203ENST00000375851 R4GN34 69 aa7.79□□□□□ -1.16
C9orf47-203ENST00000375851 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
C9orf47-203ENST00000375851 PRAC1Q96KF2 57 aa7.77□□□□□ -1.17
C9orf47-203ENST00000375851 RELNP78509 3460 aa7.75□□□□□ -1.17
C9orf47-203ENST00000375851 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
C9orf47-203ENST00000375851 CELSR1Q9NYQ6 3014 aa7.73□□□□□ -1.17
C9orf47-203ENST00000375851 KRTAP21-3Q3LHN1 58 aa7.71□□□□□ -1.18
C9orf47-203ENST00000375851 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
C9orf47-203ENST00000375851 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
C9orf47-203ENST00000375851 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
C9orf47-203ENST00000375851 M0QZ58 72 aa7.65□□□□□ -1.19
C9orf47-203ENST00000375851 LUZP6Q538Z0 58 aa7.64□□□□□ -1.19
C9orf47-203ENST00000375851 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
C9orf47-203ENST00000375851 TENM2Q9NT68 2774 aa7.62□□□□□ -1.19
C9orf47-203ENST00000375851 WDFY3Q8IZQ1 3526 aa7.61□□□□□ -1.19
C9orf47-203ENST00000375851 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
C9orf47-203ENST00000375851 ROMO1P60602 79 aa7.57□□□□□ -1.2
C9orf47-203ENST00000375851 LAMA5O15230 3695 aa7.55□□□□□ -1.2
C9orf47-203ENST00000375851 H3BS24 57 aa7.54□□□□□ -1.2
C9orf47-203ENST00000375851 PDZD2O15018 2839 aa7.53□□□□□ -1.2
C9orf47-203ENST00000375851 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
C9orf47-203ENST00000375851 TGP01266 2768 aa7.5□□□□□ -1.21
C9orf47-203ENST00000375851 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
C9orf47-203ENST00000375851 ASPMQ8IZT6 3477 aa7.49□□□□□ -1.21
C9orf47-203ENST00000375851 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
C9orf47-203ENST00000375851 VWFP04275 2813 aa7.49□□□□□ -1.21
C9orf47-203ENST00000375851 A8MUU9 505 aa7.47□□□□□ -1.21
C9orf47-203ENST00000375851 A8MU10 97 aa7.45□□□□□ -1.22
C9orf47-203ENST00000375851 C20orf166-AS1Q96NR2 134 aa7.45□□□□□ -1.22
C9orf47-203ENST00000375851 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
C9orf47-203ENST00000375851 OTOGQ6ZRI0 2925 aa7.41□□□□□ -1.22
C9orf47-203ENST00000375851 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
C9orf47-203ENST00000375851 A6NN06 94 aa7.38□□□□□ -1.23
C9orf47-203ENST00000375851 DMDP11532 3685 aa7.32□□□□□ -1.24
C9orf47-203ENST00000375851 XP32Q5T750 250 aa7.29□□□□□ -1.24
C9orf47-203ENST00000375851 SRRM2Q9UQ35 2752 aaKnown RBP7.28□□□□□ -1.24
C9orf47-203ENST00000375851 ZFHX3Q15911 3703 aa7.25□□□□□ -1.25
C9orf47-203ENST00000375851 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
C9orf47-203ENST00000375851 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
C9orf47-203ENST00000375851 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
C9orf47-203ENST00000375851 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
C9orf47-203ENST00000375851 A0A0A0MQY5 61 aa7.21□□□□□ -1.26
C9orf47-203ENST00000375851 SMG1Q96Q15 3661 aaKnown RBP7.18□□□□□ -1.26
C9orf47-203ENST00000375851 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
C9orf47-203ENST00000375851 FBN3Q75N90 2809 aa7.1□□□□□ -1.27
C9orf47-203ENST00000375851 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
C9orf47-203ENST00000375851 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
C9orf47-203ENST00000375851 SVEP1Q4LDE5 3571 aa7.07□□□□□ -1.28
C9orf47-203ENST00000375851 CUBNO60494 3623 aa7.06□□□□□ -1.28
C9orf47-203ENST00000375851 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
C9orf47-203ENST00000375851 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
C9orf47-203ENST00000375851 TNP1P09430 55 aa7.05□□□□□ -1.28
C9orf47-203ENST00000375851 H0YAA0 97 aa7.04□□□□□ -1.28
C9orf47-203ENST00000375851 P0C880 135 aa6.95□□□□□ -1.3
C9orf47-203ENST00000375851 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
C9orf47-203ENST00000375851 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
C9orf47-203ENST00000375851 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
C9orf47-203ENST00000375851 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
C9orf47-203ENST00000375851 NDUFAF8A1L188 74 aa6.9□□□□□ -1.31
C9orf47-203ENST00000375851 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
C9orf47-203ENST00000375851 ANK3Q12955 4377 aaKnown RBP6.89□□□□□ -1.31
C9orf47-203ENST00000375851 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
C9orf47-203ENST00000375851 KRTAP10-10P60014 251 aa6.84□□□□□ -1.32
C9orf47-203ENST00000375851 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.33
C9orf47-203ENST00000375851 BSNQ9UPA5 3926 aa6.69□□□□□ -1.34
C9orf47-203ENST00000375851 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
C9orf47-203ENST00000375851 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
C9orf47-203ENST00000375851 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
C9orf47-203ENST00000375851 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
C9orf47-203ENST00000375851 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
C9orf47-203ENST00000375851 VPS13CQ709C8 3753 aa6.46□□□□□ -1.38
C9orf47-203ENST00000375851 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
C9orf47-203ENST00000375851 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
C9orf47-203ENST00000375851 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
C9orf47-203ENST00000375851 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
C9orf47-203ENST00000375851 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
C9orf47-203ENST00000375851 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
C9orf47-203ENST00000375851 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
C9orf47-203ENST00000375851 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
C9orf47-203ENST00000375851 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
C9orf47-203ENST00000375851 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
C9orf47-203ENST00000375851 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
C9orf47-203ENST00000375851 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
C9orf47-203ENST00000375851 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
C9orf47-203ENST00000375851 PLECQ15149 4684 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms