RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
MSH5-203ENST00000375750 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
MSH5-203ENST00000375750 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
MSH5-203ENST00000375750 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
MSH5-203ENST00000375750 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
MSH5-203ENST00000375750 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
MSH5-203ENST00000375750 LIMD2Q9BT23 127 aa9.06□□□□□ -0.96
MSH5-203ENST00000375750 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
MSH5-203ENST00000375750 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
MSH5-203ENST00000375750 LCA10Q71F78 164 aa9.05□□□□□ -0.96
MSH5-203ENST00000375750 DNAH11Q96DT5 4516 aa9.04□□□□□ -0.96
MSH5-203ENST00000375750 SEC61GP60059 68 aa9.04□□□□□ -0.96
MSH5-203ENST00000375750 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
MSH5-203ENST00000375750 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
MSH5-203ENST00000375750 A0A1B0GVX0 72 aa9.02□□□□□ -0.96
MSH5-203ENST00000375750 A6NED7 52 aa9.02□□□□□ -0.97
MSH5-203ENST00000375750 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
MSH5-203ENST00000375750 FAT2Q9NYQ8 4349 aa9.02□□□□□ -0.97
MSH5-203ENST00000375750 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
MSH5-203ENST00000375750 HRES1P13985 223 aa8.99□□□□□ -0.97
MSH5-203ENST00000375750 LINC00483Q53H64 154 aa8.99□□□□□ -0.97
MSH5-203ENST00000375750 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
MSH5-203ENST00000375750 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
MSH5-203ENST00000375750 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
MSH5-203ENST00000375750 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
MSH5-203ENST00000375750 Q75L30 129 aa8.97□□□□□ -0.97
MSH5-203ENST00000375750 PKD1P98161 4303 aa8.97□□□□□ -0.97
MSH5-203ENST00000375750 Q5W150 140 aa8.97□□□□□ -0.97
MSH5-203ENST00000375750 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
MSH5-203ENST00000375750 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
MSH5-203ENST00000375750 SPINK7P58062 85 aa8.92□□□□□ -0.98
MSH5-203ENST00000375750 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
MSH5-203ENST00000375750 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
MSH5-203ENST00000375750 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
MSH5-203ENST00000375750 ZNF861PO60384 105 aa8.9□□□□□ -0.98
MSH5-203ENST00000375750 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.98
MSH5-203ENST00000375750 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
MSH5-203ENST00000375750 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
MSH5-203ENST00000375750 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
MSH5-203ENST00000375750 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
MSH5-203ENST00000375750 LRP1BQ9NZR2 4599 aa8.84□□□□□ -0.99
MSH5-203ENST00000375750 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
MSH5-203ENST00000375750 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -1
MSH5-203ENST00000375750 A6NN06 94 aa8.83□□□□□ -1
MSH5-203ENST00000375750 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
MSH5-203ENST00000375750 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
MSH5-203ENST00000375750 Q6ZSA8 131 aa8.8□□□□□ -1
MSH5-203ENST00000375750 IGLV7-43P04211 117 aa8.79□□□□□ -1
MSH5-203ENST00000375750 RYR2Q92736 4967 aa8.75□□□□□ -1.01
MSH5-203ENST00000375750 VPS13BQ7Z7G8 4022 aa8.74□□□□□ -1.01
MSH5-203ENST00000375750 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
MSH5-203ENST00000375750 ACYP2P14621 99 aa8.7□□□□□ -1.02
MSH5-203ENST00000375750 LINC00313P59037 77 aa8.7□□□□□ -1.02
MSH5-203ENST00000375750 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
MSH5-203ENST00000375750 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
MSH5-203ENST00000375750 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
MSH5-203ENST00000375750 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
MSH5-203ENST00000375750 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
MSH5-203ENST00000375750 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
MSH5-203ENST00000375750 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
MSH5-203ENST00000375750 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
MSH5-203ENST00000375750 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
MSH5-203ENST00000375750 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
MSH5-203ENST00000375750 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
MSH5-203ENST00000375750 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
MSH5-203ENST00000375750 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
MSH5-203ENST00000375750 A0A1B0GU69 56 aa8.59□□□□□ -1.03
MSH5-203ENST00000375750 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
MSH5-203ENST00000375750 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
MSH5-203ENST00000375750 RYR3Q15413 4870 aa8.58□□□□□ -1.04
MSH5-203ENST00000375750 FAT1Q14517 4588 aa8.57□□□□□ -1.04
MSH5-203ENST00000375750 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
MSH5-203ENST00000375750 SPINK1P00995 79 aa8.5□□□□□ -1.05
MSH5-203ENST00000375750 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
MSH5-203ENST00000375750 Q8N1X5 172 aa8.47□□□□□ -1.05
MSH5-203ENST00000375750 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
MSH5-203ENST00000375750 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.06
MSH5-203ENST00000375750 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
MSH5-203ENST00000375750 UQCR11O14957 56 aa8.41□□□□□ -1.06
MSH5-203ENST00000375750 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
MSH5-203ENST00000375750 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
MSH5-203ENST00000375750 HSPG2P98160 4391 aa8.36□□□□□ -1.07
MSH5-203ENST00000375750 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
MSH5-203ENST00000375750 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
MSH5-203ENST00000375750 RYR1P21817 5038 aa8.28□□□□□ -1.08
MSH5-203ENST00000375750 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.08
MSH5-203ENST00000375750 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
MSH5-203ENST00000375750 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
MSH5-203ENST00000375750 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
MSH5-203ENST00000375750 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
MSH5-203ENST00000375750 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
MSH5-203ENST00000375750 Q5VSD8 79 aa8.24□□□□□ -1.09
MSH5-203ENST00000375750 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
MSH5-203ENST00000375750 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
MSH5-203ENST00000375750 H0YAA0 97 aa8.2□□□□□ -1.1
MSH5-203ENST00000375750 TNXBP22105 4242 aa8.17□□□□□ -1.1
MSH5-203ENST00000375750 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
MSH5-203ENST00000375750 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
MSH5-203ENST00000375750 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
MSH5-203ENST00000375750 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 257.3 ms