RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
SIK3-201ENST00000375300 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
SIK3-201ENST00000375300 LINC00483Q53H64 154 aa9.42□□□□□ -0.9
SIK3-201ENST00000375300 DCHS2Q6V1P9 2916 aa9.41□□□□□ -0.9
SIK3-201ENST00000375300 FBN2P35556 2912 aa9.4□□□□□ -0.9
SIK3-201ENST00000375300 Q6ZSA8 131 aa9.4□□□□□ -0.91
SIK3-201ENST00000375300 Q6ZR54 194 aa9.37□□□□□ -0.91
SIK3-201ENST00000375300 Q5VSD8 79 aa9.36□□□□□ -0.91
SIK3-201ENST00000375300 LCE6AA0A183 80 aa9.34□□□□□ -0.91
SIK3-201ENST00000375300 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
SIK3-201ENST00000375300 S4R3F8 94 aa9.32□□□□□ -0.92
SIK3-201ENST00000375300 SPENQ96T58 3664 aaKnown RBP9.26□□□□□ -0.93
SIK3-201ENST00000375300 NF1P21359 2839 aa9.24□□□□□ -0.93
SIK3-201ENST00000375300 A8MU10 97 aa9.24□□□□□ -0.93
SIK3-201ENST00000375300 SPATA8Q6RVD6 105 aa9.23□□□□□ -0.93
SIK3-201ENST00000375300 STAB2Q8WWQ8 2551 aa9.22□□□□□ -0.93
SIK3-201ENST00000375300 NIPBLQ6KC79 2804 aaeCLIP9.21□□□□□ -0.93
SIK3-201ENST00000375300 CUBNO60494 3623 aa9.21□□□□□ -0.93
SIK3-201ENST00000375300 CAMK2N1Q7Z7J9 78 aa9.21□□□□□ -0.93
SIK3-201ENST00000375300 H3BS24 57 aa9.19□□□□□ -0.94
SIK3-201ENST00000375300 Q6ZRN7 208 aaPredicted RBP9.18□□□□□ -0.94
SIK3-201ENST00000375300 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
SIK3-201ENST00000375300 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
SIK3-201ENST00000375300 H1FX-AS1Q4G0G2 97 aa9.17□□□□□ -0.94
SIK3-201ENST00000375300 M0R2T5 61 aa9.17□□□□□ -0.94
SIK3-201ENST00000375300 TENM4Q6N022 2769 aa9.15□□□□□ -0.95
SIK3-201ENST00000375300 CSMD2Q7Z408 3487 aa9.14□□□□□ -0.95
SIK3-201ENST00000375300 DMBT1Q9UGM3 2413 aaPredicted RBP9.13□□□□□ -0.95
SIK3-201ENST00000375300 LUZP6Q538Z0 58 aa9.11□□□□□ -0.95
SIK3-201ENST00000375300 RPL37P61927 97 aaKnown RBP9.1□□□□□ -0.95
SIK3-201ENST00000375300 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
SIK3-201ENST00000375300 BSNQ9UPA5 3926 aa9.09□□□□□ -0.95
SIK3-201ENST00000375300 ROMO1P60602 79 aa9.08□□□□□ -0.96
SIK3-201ENST00000375300 R4GN34 69 aa9.07□□□□□ -0.96
SIK3-201ENST00000375300 A6NN06 94 aa9.07□□□□□ -0.96
SIK3-201ENST00000375300 KRTAP13-2Q52LG2 175 aa9.06□□□□□ -0.96
SIK3-201ENST00000375300 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
SIK3-201ENST00000375300 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
SIK3-201ENST00000375300 MXRA5Q9NR99 2828 aa9.04□□□□□ -0.96
SIK3-201ENST00000375300 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
SIK3-201ENST00000375300 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
SIK3-201ENST00000375300 M0QZ58 72 aa8.98□□□□□ -0.97
SIK3-201ENST00000375300 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
SIK3-201ENST00000375300 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
SIK3-201ENST00000375300 PDZD2O15018 2839 aa8.82□□□□□ -1
SIK3-201ENST00000375300 VPS13CQ709C8 3753 aa8.78□□□□□ -1
SIK3-201ENST00000375300 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
SIK3-201ENST00000375300 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
SIK3-201ENST00000375300 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
SIK3-201ENST00000375300 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
SIK3-201ENST00000375300 TENM1Q9UKZ4 2725 aa8.69□□□□□ -1.02
SIK3-201ENST00000375300 FBN1P35555 2871 aaKnown RBP8.68□□□□□ -1.02
SIK3-201ENST00000375300 A8MUU9 505 aa8.68□□□□□ -1.02
SIK3-201ENST00000375300 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
SIK3-201ENST00000375300 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
SIK3-201ENST00000375300 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
SIK3-201ENST00000375300 TRRAPQ9Y4A5 3859 aa8.65□□□□□ -1.02
SIK3-201ENST00000375300 A0A0A0MQY5 61 aa8.65□□□□□ -1.03
SIK3-201ENST00000375300 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
SIK3-201ENST00000375300 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
SIK3-201ENST00000375300 VWFP04275 2813 aa8.56□□□□□ -1.04
SIK3-201ENST00000375300 NDUFAF8A1L188 74 aa8.55□□□□□ -1.04
SIK3-201ENST00000375300 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
SIK3-201ENST00000375300 H0YAA0 97 aa8.51□□□□□ -1.05
SIK3-201ENST00000375300 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
SIK3-201ENST00000375300 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
SIK3-201ENST00000375300 TGP01266 2768 aa8.43□□□□□ -1.06
SIK3-201ENST00000375300 ZNF469Q96JG9 3925 aaPredicted RBP8.42□□□□□ -1.06
SIK3-201ENST00000375300 XP32Q5T750 250 aa8.4□□□□□ -1.06
SIK3-201ENST00000375300 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
SIK3-201ENST00000375300 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
SIK3-201ENST00000375300 P0C880 135 aa8.25□□□□□ -1.09
SIK3-201ENST00000375300 TNP1P09430 55 aa8.22□□□□□ -1.09
SIK3-201ENST00000375300 AKAP9Q99996 3911 aa8.21□□□□□ -1.1
SIK3-201ENST00000375300 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
SIK3-201ENST00000375300 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
SIK3-201ENST00000375300 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
SIK3-201ENST00000375300 TPRXLQ17RH7 258 aa8.05□□□□□ -1.12
SIK3-201ENST00000375300 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
SIK3-201ENST00000375300 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
SIK3-201ENST00000375300 SRRM2Q9UQ35 2752 aaKnown RBP7.96□□□□□ -1.14
SIK3-201ENST00000375300 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
SIK3-201ENST00000375300 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
SIK3-201ENST00000375300 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
SIK3-201ENST00000375300 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
SIK3-201ENST00000375300 MEGF8Q7Z7M0 2845 aa7.84□□□□□ -1.16
SIK3-201ENST00000375300 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
SIK3-201ENST00000375300 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
SIK3-201ENST00000375300 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
SIK3-201ENST00000375300 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
SIK3-201ENST00000375300 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
SIK3-201ENST00000375300 DNAH10Q8IVF4 4471 aa7.61□□□□□ -1.19
SIK3-201ENST00000375300 ALMS1Q8TCU4 4167 aa7.56□□□□□ -1.2
SIK3-201ENST00000375300 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
SIK3-201ENST00000375300 PLECQ15149 4684 aaKnown RBP7.54□□□□□ -1.2
SIK3-201ENST00000375300 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
SIK3-201ENST00000375300 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
SIK3-201ENST00000375300 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
SIK3-201ENST00000375300 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
SIK3-201ENST00000375300 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms