RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
HMGCL-203ENST00000374490 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
HMGCL-203ENST00000374490 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
HMGCL-203ENST00000374490 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
HMGCL-203ENST00000374490 A0A1B0GVX0 72 aa8.34□□□□□ -1.07
HMGCL-203ENST00000374490 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
HMGCL-203ENST00000374490 PRO0628Q9UI54 55 aa8.33□□□□□ -1.08
HMGCL-203ENST00000374490 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
HMGCL-203ENST00000374490 Q1T7F1 81 aa8.32□□□□□ -1.08
HMGCL-203ENST00000374490 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
HMGCL-203ENST00000374490 CD164Q04900 197 aa8.3□□□□□ -1.08
HMGCL-203ENST00000374490 V9GYY9 64 aa8.3□□□□□ -1.08
HMGCL-203ENST00000374490 PRR4Q16378 134 aa8.29□□□□□ -1.08
HMGCL-203ENST00000374490 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
HMGCL-203ENST00000374490 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
HMGCL-203ENST00000374490 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
HMGCL-203ENST00000374490 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
HMGCL-203ENST00000374490 PKD1P98161 4303 aa8.27□□□□□ -1.09
HMGCL-203ENST00000374490 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
HMGCL-203ENST00000374490 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
HMGCL-203ENST00000374490 HSPG2P98160 4391 aa8.24□□□□□ -1.09
HMGCL-203ENST00000374490 NDUFS5O43920 106 aa8.22□□□□□ -1.09
HMGCL-203ENST00000374490 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
HMGCL-203ENST00000374490 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
HMGCL-203ENST00000374490 C8orf87E5RJ46 101 aa8.21□□□□□ -1.09
HMGCL-203ENST00000374490 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
HMGCL-203ENST00000374490 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
HMGCL-203ENST00000374490 Q8N1X5 172 aa8.2□□□□□ -1.1
HMGCL-203ENST00000374490 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
HMGCL-203ENST00000374490 Q6ZSA8 131 aa8.18□□□□□ -1.1
HMGCL-203ENST00000374490 LOC101927531A0A1B0GV80 90 aa8.17□□□□□ -1.1
HMGCL-203ENST00000374490 DNAH5Q8TE73 4624 aa8.16□□□□□ -1.1
HMGCL-203ENST00000374490 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
HMGCL-203ENST00000374490 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
HMGCL-203ENST00000374490 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
HMGCL-203ENST00000374490 COA5Q86WW8 74 aa8.15□□□□□ -1.1
HMGCL-203ENST00000374490 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
HMGCL-203ENST00000374490 A0A087X002 238 aa8.14□□□□□ -1.11
HMGCL-203ENST00000374490 NOTCH2NLQ7Z3S9 236 aa8.14□□□□□ -1.11
HMGCL-203ENST00000374490 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
HMGCL-203ENST00000374490 PSPHP1O15172 72 aa8.11□□□□□ -1.11
HMGCL-203ENST00000374490 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
HMGCL-203ENST00000374490 A8MUN3 132 aa8.07□□□□□ -1.12
HMGCL-203ENST00000374490 LINC00313P59037 77 aa8.06□□□□□ -1.12
HMGCL-203ENST00000374490 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
HMGCL-203ENST00000374490 Q5VV11 94 aa8.06□□□□□ -1.12
HMGCL-203ENST00000374490 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
HMGCL-203ENST00000374490 HERC1Q15751 4861 aa8.05□□□□□ -1.12
HMGCL-203ENST00000374490 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
HMGCL-203ENST00000374490 Q5W150 140 aa8.03□□□□□ -1.12
HMGCL-203ENST00000374490 PRR15LQ9BU68 103 aa8.03□□□□□ -1.12
HMGCL-203ENST00000374490 HRES1P13985 223 aa8.01□□□□□ -1.13
HMGCL-203ENST00000374490 Q5VSD8 79 aa8.01□□□□□ -1.13
HMGCL-203ENST00000374490 Q75L30 129 aa8.01□□□□□ -1.13
HMGCL-203ENST00000374490 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
HMGCL-203ENST00000374490 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
HMGCL-203ENST00000374490 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
HMGCL-203ENST00000374490 FAT1Q14517 4588 aa7.99□□□□□ -1.13
HMGCL-203ENST00000374490 ACYP2P14621 99 aa7.97□□□□□ -1.13
HMGCL-203ENST00000374490 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
HMGCL-203ENST00000374490 DNAH8Q96JB1 4490 aa7.96□□□□□ -1.14
HMGCL-203ENST00000374490 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
HMGCL-203ENST00000374490 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
HMGCL-203ENST00000374490 SPINK1P00995 79 aa7.94□□□□□ -1.14
HMGCL-203ENST00000374490 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
HMGCL-203ENST00000374490 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
HMGCL-203ENST00000374490 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
HMGCL-203ENST00000374490 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
HMGCL-203ENST00000374490 PLA2G1BP04054 148 aaKnown RBP7.92□□□□□ -1.14
HMGCL-203ENST00000374490 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
HMGCL-203ENST00000374490 SPAG11AQ6PDA7 123 aa7.92□□□□□ -1.14
HMGCL-203ENST00000374490 J3QL48 77 aa7.9□□□□□ -1.14
HMGCL-203ENST00000374490 A6NED7 52 aa7.89□□□□□ -1.15
HMGCL-203ENST00000374490 MYCBP2O75592 4640 aa7.88□□□□□ -1.15
HMGCL-203ENST00000374490 PRR26Q8N8Z3 221 aa7.85□□□□□ -1.15
HMGCL-203ENST00000374490 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
HMGCL-203ENST00000374490 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
HMGCL-203ENST00000374490 ATP11AUNQ6ZP68 121 aa7.83□□□□□ -1.16
HMGCL-203ENST00000374490 LINC00304Q8N9R0 145 aa7.83□□□□□ -1.16
HMGCL-203ENST00000374490 FLG2Q5D862 2391 aaPredicted RBP7.83□□□□□ -1.16
HMGCL-203ENST00000374490 VPS13BQ7Z7G8 4022 aa7.83□□□□□ -1.16
HMGCL-203ENST00000374490 LCA10Q71F78 164 aa7.81□□□□□ -1.16
HMGCL-203ENST00000374490 IGKV2D-30A0A075B6S6 120 aa7.78□□□□□ -1.16
HMGCL-203ENST00000374490 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
HMGCL-203ENST00000374490 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
HMGCL-203ENST00000374490 A8MU10 97 aa7.75□□□□□ -1.17
HMGCL-203ENST00000374490 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
HMGCL-203ENST00000374490 SPINK7P58062 85 aa7.73□□□□□ -1.17
HMGCL-203ENST00000374490 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
HMGCL-203ENST00000374490 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.17
HMGCL-203ENST00000374490 A0A1B0GU69 56 aa7.7□□□□□ -1.18
HMGCL-203ENST00000374490 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
HMGCL-203ENST00000374490 A6NN06 94 aa7.65□□□□□ -1.18
HMGCL-203ENST00000374490 A8MUU9 505 aa7.65□□□□□ -1.18
HMGCL-203ENST00000374490 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
HMGCL-203ENST00000374490 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
HMGCL-203ENST00000374490 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
HMGCL-203ENST00000374490 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
HMGCL-203ENST00000374490 SPATA8Q6RVD6 105 aa7.59□□□□□ -1.19
HMGCL-203ENST00000374490 UQCR11O14957 56 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms