RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MP68P56378 58 aa7.2□□□□□ -1.26
HMGCL-202ENST00000374487 Q96NJ1 140 aa7.2□□□□□ -1.26
HMGCL-202ENST00000374487 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
HMGCL-202ENST00000374487 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
HMGCL-202ENST00000374487 Q6ZSA8 131 aa7.18□□□□□ -1.26
HMGCL-202ENST00000374487 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
HMGCL-202ENST00000374487 Q8N1X5 172 aa7.16□□□□□ -1.26
HMGCL-202ENST00000374487 LINC00208Q96KT6 92 aa7.16□□□□□ -1.26
HMGCL-202ENST00000374487 IGHV6-1A0A0B4J1U7 121 aa7.15□□□□□ -1.27
HMGCL-202ENST00000374487 H0Y9P7 68 aa7.15□□□□□ -1.27
HMGCL-202ENST00000374487 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
HMGCL-202ENST00000374487 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
HMGCL-202ENST00000374487 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
HMGCL-202ENST00000374487 Q5VSD8 79 aa7.12□□□□□ -1.27
HMGCL-202ENST00000374487 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
HMGCL-202ENST00000374487 H3BPC8 53 aa7.11□□□□□ -1.27
HMGCL-202ENST00000374487 SPINK6Q6UWN8 80 aa7.11□□□□□ -1.27
HMGCL-202ENST00000374487 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
HMGCL-202ENST00000374487 CD164Q04900 197 aa7.1□□□□□ -1.27
HMGCL-202ENST00000374487 Q5XG85 94 aa7.1□□□□□ -1.27
HMGCL-202ENST00000374487 NDUFS5O43920 106 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
HMGCL-202ENST00000374487 PRR4Q16378 134 aa7.07□□□□□ -1.28
HMGCL-202ENST00000374487 A0A087X002 238 aa7.06□□□□□ -1.28
HMGCL-202ENST00000374487 MRPL34Q9BQ48 92 aaKnown RBP7.06□□□□□ -1.28
HMGCL-202ENST00000374487 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
HMGCL-202ENST00000374487 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
HMGCL-202ENST00000374487 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
HMGCL-202ENST00000374487 FAM229BQ4G0N7 80 aa7.04□□□□□ -1.28
HMGCL-202ENST00000374487 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
HMGCL-202ENST00000374487 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
HMGCL-202ENST00000374487 MYCBP2O75592 4640 aa7.03□□□□□ -1.28
HMGCL-202ENST00000374487 CYP4F30PQ9H0H9 118 aa7.03□□□□□ -1.28
HMGCL-202ENST00000374487 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
HMGCL-202ENST00000374487 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
HMGCL-202ENST00000374487 FLG2Q5D862 2391 aaPredicted RBP7□□□□□ -1.29
HMGCL-202ENST00000374487 PLA2G1BP04054 148 aaKnown RBP6.99□□□□□ -1.29
HMGCL-202ENST00000374487 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
HMGCL-202ENST00000374487 LRP1Q07954 4544 aaKnown RBP6.98□□□□□ -1.29
HMGCL-202ENST00000374487 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
HMGCL-202ENST00000374487 PCOTHQ58A44 107 aa6.96□□□□□ -1.29
HMGCL-202ENST00000374487 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.29
HMGCL-202ENST00000374487 LINC00313P59037 77 aa6.96□□□□□ -1.3
HMGCL-202ENST00000374487 C1orf195Q5TG92 126 aa6.96□□□□□ -1.3
HMGCL-202ENST00000374487 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
HMGCL-202ENST00000374487 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
HMGCL-202ENST00000374487 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
HMGCL-202ENST00000374487 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
HMGCL-202ENST00000374487 HERC1Q15751 4861 aa6.93□□□□□ -1.3
HMGCL-202ENST00000374487 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
HMGCL-202ENST00000374487 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
HMGCL-202ENST00000374487 Q5W150 140 aa6.91□□□□□ -1.3
HMGCL-202ENST00000374487 SPINK1P00995 79 aa6.89□□□□□ -1.31
HMGCL-202ENST00000374487 Q1T7F1 81 aa6.88□□□□□ -1.31
HMGCL-202ENST00000374487 PRR26Q8N8Z3 221 aa6.86□□□□□ -1.31
HMGCL-202ENST00000374487 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
HMGCL-202ENST00000374487 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
HMGCL-202ENST00000374487 COA5Q86WW8 74 aa6.85□□□□□ -1.31
HMGCL-202ENST00000374487 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
HMGCL-202ENST00000374487 RETNLBQ9BQ08 111 aa6.84□□□□□ -1.32
HMGCL-202ENST00000374487 V9GYY9 64 aa6.84□□□□□ -1.32
HMGCL-202ENST00000374487 J3QL48 77 aa6.82□□□□□ -1.32
HMGCL-202ENST00000374487 PSPHP1O15172 72 aa6.82□□□□□ -1.32
HMGCL-202ENST00000374487 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
HMGCL-202ENST00000374487 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
HMGCL-202ENST00000374487 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
HMGCL-202ENST00000374487 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
HMGCL-202ENST00000374487 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
HMGCL-202ENST00000374487 TNXBP22105 4242 aa6.79□□□□□ -1.32
HMGCL-202ENST00000374487 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
HMGCL-202ENST00000374487 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
HMGCL-202ENST00000374487 HRES1P13985 223 aa6.77□□□□□ -1.33
HMGCL-202ENST00000374487 A8MUN3 132 aa6.75□□□□□ -1.33
HMGCL-202ENST00000374487 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
HMGCL-202ENST00000374487 ACYP2P14621 99 aa6.73□□□□□ -1.33
HMGCL-202ENST00000374487 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
HMGCL-202ENST00000374487 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
HMGCL-202ENST00000374487 KRTAP10-8P60410 259 aa6.69□□□□□ -1.34
HMGCL-202ENST00000374487 Q5VV11 94 aa6.69□□□□□ -1.34
HMGCL-202ENST00000374487 DMAC1Q96GE9 116 aa6.69□□□□□ -1.34
HMGCL-202ENST00000374487 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
HMGCL-202ENST00000374487 CHKB-CPT1BH3BT56 60 aa6.68□□□□□ -1.34
HMGCL-202ENST00000374487 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
HMGCL-202ENST00000374487 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.35
HMGCL-202ENST00000374487 Q75L30 129 aa6.62□□□□□ -1.35
HMGCL-202ENST00000374487 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
HMGCL-202ENST00000374487 A6NED7 52 aa6.59□□□□□ -1.35
HMGCL-202ENST00000374487 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
HMGCL-202ENST00000374487 A8MUU9 505 aa6.58□□□□□ -1.36
HMGCL-202ENST00000374487 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
HMGCL-202ENST00000374487 LPAP08519 4548 aa6.54□□□□□ -1.36
HMGCL-202ENST00000374487 A8MU10 97 aa6.52□□□□□ -1.36
HMGCL-202ENST00000374487 LRP2P98164 4655 aa6.51□□□□□ -1.37
HMGCL-202ENST00000374487 A0A1B0GU69 56 aa6.5□□□□□ -1.37
HMGCL-202ENST00000374487 LCA10Q71F78 164 aa6.5□□□□□ -1.37
HMGCL-202ENST00000374487 SPINK7P58062 85 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms