RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 PDZD2O15018 2839 aa5.2□□□□□ -1.58
PTPRT-204ENST00000373190 M0R2T5 61 aa5.2□□□□□ -1.58
PTPRT-204ENST00000373190 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
PTPRT-204ENST00000373190 LCE6AA0A183 80 aa5.19□□□□□ -1.58
PTPRT-204ENST00000373190 M0QZ58 72 aa5.18□□□□□ -1.58
PTPRT-204ENST00000373190 SPEGQ15772 3267 aa5.17□□□□□ -1.58
PTPRT-204ENST00000373190 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
PTPRT-204ENST00000373190 PANO1I0J062 215 aa5.17□□□□□ -1.58
PTPRT-204ENST00000373190 EYSQ5T1H1 3165 aa5.17□□□□□ -1.58
PTPRT-204ENST00000373190 SZT2Q5T011 3432 aa5.16□□□□□ -1.58
PTPRT-204ENST00000373190 TENM1Q9UKZ4 2725 aa5.15□□□□□ -1.58
PTPRT-204ENST00000373190 HRNRQ86YZ3 2850 aaPredicted RBP5.14□□□□□ -1.59
PTPRT-204ENST00000373190 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
PTPRT-204ENST00000373190 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
PTPRT-204ENST00000373190 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
PTPRT-204ENST00000373190 SPTBN5Q9NRC6 3674 aaKnown RBP5.11□□□□□ -1.59
PTPRT-204ENST00000373190 TGP01266 2768 aa5.1□□□□□ -1.59
PTPRT-204ENST00000373190 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
PTPRT-204ENST00000373190 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
PTPRT-204ENST00000373190 A0A087X002 238 aa5.09□□□□□ -1.59
PTPRT-204ENST00000373190 MXRA5Q9NR99 2828 aa5.09□□□□□ -1.6
PTPRT-204ENST00000373190 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
PTPRT-204ENST00000373190 A8MU10 97 aa5.07□□□□□ -1.6
PTPRT-204ENST00000373190 WDFY3Q8IZQ1 3526 aa5.06□□□□□ -1.6
PTPRT-204ENST00000373190 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
PTPRT-204ENST00000373190 KRTAP10-1P60331 282 aa5.04□□□□□ -1.6
PTPRT-204ENST00000373190 Q5VSD8 79 aa5.04□□□□□ -1.6
PTPRT-204ENST00000373190 KRTAP10-2P60368 255 aa5.02□□□□□ -1.61
PTPRT-204ENST00000373190 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
PTPRT-204ENST00000373190 LOC400499M0QZD8 3231 aa5□□□□□ -1.61
PTPRT-204ENST00000373190 MYO15AQ9UKN7 3530 aa5□□□□□ -1.61
PTPRT-204ENST00000373190 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
PTPRT-204ENST00000373190 A8MUU9 505 aa4.99□□□□□ -1.61
PTPRT-204ENST00000373190 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
PTPRT-204ENST00000373190 VWFP04275 2813 aa4.98□□□□□ -1.61
PTPRT-204ENST00000373190 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
PTPRT-204ENST00000373190 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
PTPRT-204ENST00000373190 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.61
PTPRT-204ENST00000373190 KRTAP7-1Q8IUC3 87 aa4.94□□□□□ -1.62
PTPRT-204ENST00000373190 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
PTPRT-204ENST00000373190 LAMA5O15230 3695 aa4.92□□□□□ -1.62
PTPRT-204ENST00000373190 Q6ZRN7 208 aaPredicted RBP4.88□□□□□ -1.63
PTPRT-204ENST00000373190 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
PTPRT-204ENST00000373190 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
PTPRT-204ENST00000373190 ASPMQ8IZT6 3477 aa4.85□□□□□ -1.63
PTPRT-204ENST00000373190 TNP1P09430 55 aa4.85□□□□□ -1.63
PTPRT-204ENST00000373190 PP632Q6XCG6 107 aa4.84□□□□□ -1.64
PTPRT-204ENST00000373190 DCHS1Q96JQ0 3298 aa4.83□□□□□ -1.64
PTPRT-204ENST00000373190 H0YAA0 97 aa4.82□□□□□ -1.64
PTPRT-204ENST00000373190 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
PTPRT-204ENST00000373190 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
PTPRT-204ENST00000373190 DMDP11532 3685 aa4.77□□□□□ -1.65
PTPRT-204ENST00000373190 SMG1Q96Q15 3661 aaKnown RBP4.76□□□□□ -1.65
PTPRT-204ENST00000373190 NBPF19A0A087WUL8 3843 aa4.75□□□□□ -1.65
PTPRT-204ENST00000373190 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
PTPRT-204ENST00000373190 P0C880 135 aa4.75□□□□□ -1.65
PTPRT-204ENST00000373190 TENM2Q9NT68 2774 aa4.72□□□□□ -1.65
PTPRT-204ENST00000373190 ZFHX3Q15911 3703 aa4.7□□□□□ -1.66
PTPRT-204ENST00000373190 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
PTPRT-204ENST00000373190 ZFHX4Q86UP3 3567 aa4.68□□□□□ -1.66
PTPRT-204ENST00000373190 RELNP78509 3460 aa4.66□□□□□ -1.66
PTPRT-204ENST00000373190 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
PTPRT-204ENST00000373190 OTOGQ6ZRI0 2925 aa4.66□□□□□ -1.66
PTPRT-204ENST00000373190 XP32Q5T750 250 aa4.61□□□□□ -1.67
PTPRT-204ENST00000373190 VPS13CQ709C8 3753 aa4.6□□□□□ -1.67
PTPRT-204ENST00000373190 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
PTPRT-204ENST00000373190 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
PTPRT-204ENST00000373190 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
PTPRT-204ENST00000373190 CUBNO60494 3623 aa4.57□□□□□ -1.68
PTPRT-204ENST00000373190 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
PTPRT-204ENST00000373190 TRRAPQ9Y4A5 3859 aa4.55□□□□□ -1.68
PTPRT-204ENST00000373190 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
PTPRT-204ENST00000373190 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
PTPRT-204ENST00000373190 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
PTPRT-204ENST00000373190 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
PTPRT-204ENST00000373190 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
PTPRT-204ENST00000373190 A0A1B0GVY2 172 aa4.42□□□□□ -1.7
PTPRT-204ENST00000373190 MUC3AQ02505 3323 aa4.41□□□□□ -1.7
PTPRT-204ENST00000373190 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
PTPRT-204ENST00000373190 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
PTPRT-204ENST00000373190 BSNQ9UPA5 3926 aa4.36□□□□□ -1.71
PTPRT-204ENST00000373190 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
PTPRT-204ENST00000373190 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
PTPRT-204ENST00000373190 KRTAP21-3Q3LHN1 58 aa4.29□□□□□ -1.72
PTPRT-204ENST00000373190 CSMD2Q7Z408 3487 aa4.26□□□□□ -1.73
PTPRT-204ENST00000373190 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
PTPRT-204ENST00000373190 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
PTPRT-204ENST00000373190 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
PTPRT-204ENST00000373190 INE1O15225 51 aa4.19□□□□□ -1.74
PTPRT-204ENST00000373190 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
PTPRT-204ENST00000373190 ANK3Q12955 4377 aaKnown RBP4.15□□□□□ -1.75
PTPRT-204ENST00000373190 LYSTQ99698 3801 aa4.05□□□□□ -1.76
PTPRT-204ENST00000373190 ZNF469Q96JG9 3925 aaPredicted RBP4.04□□□□□ -1.76
PTPRT-204ENST00000373190 DNAH3Q8TD57 4116 aa4.02□□□□□ -1.77
PTPRT-204ENST00000373190 HECTD4Q9Y4D8 3996 aa4.01□□□□□ -1.77
PTPRT-204ENST00000373190 DNAH2Q9P225 4427 aa4□□□□□ -1.77
PTPRT-204ENST00000373190 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
PTPRT-204ENST00000373190 HUWE1Q7Z6Z7 4374 aaKnown RBP3.98□□□□□ -1.77
PTPRT-204ENST00000373190 KRTAP3-3Q9BYR6 98 aa3.98□□□□□ -1.77
PTPRT-204ENST00000373190 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms