RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
TRAPPC3-201ENST00000373159 CEND1Q8N111 149 aa6.27□□□□□ -1.41
TRAPPC3-201ENST00000373159 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
TRAPPC3-201ENST00000373159 A6NJY4 79 aa6.26□□□□□ -1.41
TRAPPC3-201ENST00000373159 FXYD2P54710 66 aa6.23□□□□□ -1.41
TRAPPC3-201ENST00000373159 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
TRAPPC3-201ENST00000373159 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
TRAPPC3-201ENST00000373159 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
TRAPPC3-201ENST00000373159 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC3-201ENST00000373159 J3KT08 172 aa6.21□□□□□ -1.42
TRAPPC3-201ENST00000373159 WFDC13Q8IUB5 93 aa6.2□□□□□ -1.42
TRAPPC3-201ENST00000373159 COX6CP09669 75 aa6.19□□□□□ -1.42
TRAPPC3-201ENST00000373159 PSMB2P49721 201 aa6.19□□□□□ -1.42
TRAPPC3-201ENST00000373159 VPS25Q9BRG1 176 aa6.19□□□□□ -1.42
TRAPPC3-201ENST00000373159 RBM3P98179 157 aaKnown RBP6.18□□□□□ -1.42
TRAPPC3-201ENST00000373159 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
TRAPPC3-201ENST00000373159 DSCR8Q96T75 97 aa6.17□□□□□ -1.42
TRAPPC3-201ENST00000373159 VAMP8Q9BV40 100 aa6.17□□□□□ -1.42
TRAPPC3-201ENST00000373159 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
TRAPPC3-201ENST00000373159 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
TRAPPC3-201ENST00000373159 NDUFB1O75438 58 aa6.16□□□□□ -1.42
TRAPPC3-201ENST00000373159 S100A1P23297 94 aa6.16□□□□□ -1.42
TRAPPC3-201ENST00000373159 Q6ZQT0 140 aa6.15□□□□□ -1.42
TRAPPC3-201ENST00000373159 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
TRAPPC3-201ENST00000373159 K7ERJ3 54 aa6.13□□□□□ -1.43
TRAPPC3-201ENST00000373159 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
TRAPPC3-201ENST00000373159 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
TRAPPC3-201ENST00000373159 C9JAW5 83 aa6.12□□□□□ -1.43
TRAPPC3-201ENST00000373159 HSD52Q0P140 79 aa6.11□□□□□ -1.43
TRAPPC3-201ENST00000373159 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
TRAPPC3-201ENST00000373159 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
TRAPPC3-201ENST00000373159 Q6ZVQ6 151 aa6.08□□□□□ -1.44
TRAPPC3-201ENST00000373159 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
TRAPPC3-201ENST00000373159 SCGB1C2P0DMR2 95 aa6.07□□□□□ -1.44
TRAPPC3-201ENST00000373159 A0A1B0GW54 56 aa6.06□□□□□ -1.44
TRAPPC3-201ENST00000373159 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
TRAPPC3-201ENST00000373159 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
TRAPPC3-201ENST00000373159 TMEM254Q8TBM7 123 aa6.01□□□□□ -1.45
TRAPPC3-201ENST00000373159 MRPL34Q9BQ48 92 aaKnown RBP6.01□□□□□ -1.45
TRAPPC3-201ENST00000373159 JMJD7-PLA2G4BH0Y9G9 81 aa6□□□□□ -1.45
TRAPPC3-201ENST00000373159 PDE6GP18545 87 aa6□□□□□ -1.45
TRAPPC3-201ENST00000373159 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
TRAPPC3-201ENST00000373159 A6NN06 94 aa5.98□□□□□ -1.45
TRAPPC3-201ENST00000373159 PYY3Q5JQD4 70 aa5.97□□□□□ -1.45
TRAPPC3-201ENST00000373159 NREPQ16612 68 aa5.96□□□□□ -1.46
TRAPPC3-201ENST00000373159 UQCR10Q9UDW1 63 aa5.96□□□□□ -1.46
TRAPPC3-201ENST00000373159 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
TRAPPC3-201ENST00000373159 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
TRAPPC3-201ENST00000373159 NDUFS5O43920 106 aa5.94□□□□□ -1.46
TRAPPC3-201ENST00000373159 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
TRAPPC3-201ENST00000373159 MT1BP07438 61 aa5.94□□□□□ -1.46
TRAPPC3-201ENST00000373159 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
TRAPPC3-201ENST00000373159 ATXN8Q156A1 80 aa5.93□□□□□ -1.46
TRAPPC3-201ENST00000373159 KRTAP20-1Q3LI63 56 aa5.93□□□□□ -1.46
TRAPPC3-201ENST00000373159 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
TRAPPC3-201ENST00000373159 KMT2DO14686 5537 aa5.92□□□□□ -1.46
TRAPPC3-201ENST00000373159 Q5W150 140 aa5.92□□□□□ -1.46
TRAPPC3-201ENST00000373159 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
TRAPPC3-201ENST00000373159 Q5VV11 94 aa5.91□□□□□ -1.46
TRAPPC3-201ENST00000373159 K7EQZ3 153 aa5.9□□□□□ -1.46
TRAPPC3-201ENST00000373159 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
TRAPPC3-201ENST00000373159 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
TRAPPC3-201ENST00000373159 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
TRAPPC3-201ENST00000373159 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
TRAPPC3-201ENST00000373159 C4orf26Q17RF5 130 aa5.88□□□□□ -1.47
TRAPPC3-201ENST00000373159 C5orf47Q569G3 176 aa5.88□□□□□ -1.47
TRAPPC3-201ENST00000373159 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
TRAPPC3-201ENST00000373159 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
TRAPPC3-201ENST00000373159 NAA38Q9BRA0 125 aaKnown RBP5.84□□□□□ -1.47
TRAPPC3-201ENST00000373159 CSAG1Q6PB30 78 aa5.83□□□□□ -1.48
TRAPPC3-201ENST00000373159 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
TRAPPC3-201ENST00000373159 BPY2O14599 106 aa5.81□□□□□ -1.48
TRAPPC3-201ENST00000373159 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
TRAPPC3-201ENST00000373159 S4R3F8 94 aa5.8□□□□□ -1.48
TRAPPC3-201ENST00000373159 CXCL6P80162 114 aa5.79□□□□□ -1.48
TRAPPC3-201ENST00000373159 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
TRAPPC3-201ENST00000373159 M0R143 59 aa5.78□□□□□ -1.48
TRAPPC3-201ENST00000373159 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
TRAPPC3-201ENST00000373159 LCA10Q71F78 164 aa5.76□□□□□ -1.49
TRAPPC3-201ENST00000373159 Q8N9L7 120 aa5.75□□□□□ -1.49
TRAPPC3-201ENST00000373159 C1orf64Q8NEQ6 169 aa5.75□□□□□ -1.49
TRAPPC3-201ENST00000373159 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
TRAPPC3-201ENST00000373159 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
TRAPPC3-201ENST00000373159 H3BT86 120 aa5.71□□□□□ -1.5
TRAPPC3-201ENST00000373159 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
TRAPPC3-201ENST00000373159 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC3-201ENST00000373159 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
TRAPPC3-201ENST00000373159 TSTD3H0UI37 97 aa5.65□□□□□ -1.5
TRAPPC3-201ENST00000373159 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
TRAPPC3-201ENST00000373159 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
TRAPPC3-201ENST00000373159 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
TRAPPC3-201ENST00000373159 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
TRAPPC3-201ENST00000373159 A0A1W2PPM0 123 aa5.58□□□□□ -1.52
TRAPPC3-201ENST00000373159 SPRR2EP22531 72 aa5.58□□□□□ -1.52
TRAPPC3-201ENST00000373159 SPRR2BP35325 72 aa5.58□□□□□ -1.52
TRAPPC3-201ENST00000373159 SPRR2AP35326 72 aa5.58□□□□□ -1.52
TRAPPC3-201ENST00000373159 BATFQ16520 125 aa5.58□□□□□ -1.52
TRAPPC3-201ENST00000373159 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
TRAPPC3-201ENST00000373159 A0A087WVE0 104 aa5.55□□□□□ -1.52
TRAPPC3-201ENST00000373159 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms