RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 H3BPC8 53 aa10.99□□□□□ -0.65
USP49-202ENST00000373010 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
USP49-202ENST00000373010 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
USP49-202ENST00000373010 NDUFS5O43920 106 aa10.95□□□□□ -0.66
USP49-202ENST00000373010 CD164Q04900 197 aa10.95□□□□□ -0.66
USP49-202ENST00000373010 CYP4F30PQ9H0H9 118 aa10.95□□□□□ -0.66
USP49-202ENST00000373010 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
USP49-202ENST00000373010 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
USP49-202ENST00000373010 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
USP49-202ENST00000373010 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
USP49-202ENST00000373010 SPANXA2-OT1Q8N9U9 137 aa10.86□□□□□ -0.67
USP49-202ENST00000373010 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
USP49-202ENST00000373010 PCOTHQ58A44 107 aa10.85□□□□□ -0.67
USP49-202ENST00000373010 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
USP49-202ENST00000373010 SACSQ9NZJ4 4579 aa10.81□□□□□ -0.68
USP49-202ENST00000373010 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
USP49-202ENST00000373010 PKHD1P08F94 4074 aa10.77□□□□□ -0.68
USP49-202ENST00000373010 Q5W150 140 aa10.77□□□□□ -0.68
USP49-202ENST00000373010 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
USP49-202ENST00000373010 LINC00336Q6ZUF6 198 aa10.76□□□□□ -0.69
USP49-202ENST00000373010 C8orf87E5RJ46 101 aa10.75□□□□□ -0.69
USP49-202ENST00000373010 PLA2G1BP04054 148 aaKnown RBP10.75□□□□□ -0.69
USP49-202ENST00000373010 LINC00313P59037 77 aa10.73□□□□□ -0.69
USP49-202ENST00000373010 KRTAP13-3Q3SY46 172 aa10.72□□□□□ -0.69
USP49-202ENST00000373010 Q1T7F1 81 aa10.71□□□□□ -0.69
USP49-202ENST00000373010 TYMSOSQ8TAI1 123 aa10.69□□□□□ -0.7
USP49-202ENST00000373010 LIMD2Q9BT23 127 aa10.68□□□□□ -0.7
USP49-202ENST00000373010 DYNC1H1Q14204 4646 aaKnown RBP10.68□□□□□ -0.7
USP49-202ENST00000373010 SMR3BP02814 79 aaPredicted RBP10.67□□□□□ -0.7
USP49-202ENST00000373010 LOC101927531A0A1B0GV80 90 aa10.66□□□□□ -0.7
USP49-202ENST00000373010 COA5Q86WW8 74 aa10.66□□□□□ -0.7
USP49-202ENST00000373010 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
USP49-202ENST00000373010 Q8N9P0 234 aaPredicted RBP10.66□□□□□ -0.7
USP49-202ENST00000373010 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
USP49-202ENST00000373010 PSPHP1O15172 72 aa10.63□□□□□ -0.71
USP49-202ENST00000373010 PRR26Q8N8Z3 221 aa10.63□□□□□ -0.71
USP49-202ENST00000373010 KRTAP16-1A8MUX0 517 aa10.62□□□□□ -0.71
USP49-202ENST00000373010 A0A1B0GVY2 172 aa10.61□□□□□ -0.71
USP49-202ENST00000373010 PRO0628Q9UI54 55 aa10.6□□□□□ -0.71
USP49-202ENST00000373010 SPINK1P00995 79 aa10.59□□□□□ -0.71
USP49-202ENST00000373010 BRK1Q8WUW1 75 aa10.59□□□□□ -0.71
USP49-202ENST00000373010 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
USP49-202ENST00000373010 A8MUN3 132 aa10.56□□□□□ -0.72
USP49-202ENST00000373010 HRES1P13985 223 aa10.55□□□□□ -0.72
USP49-202ENST00000373010 V9GYY9 64 aa10.55□□□□□ -0.72
USP49-202ENST00000373010 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
USP49-202ENST00000373010 RYR2Q92736 4967 aa10.53□□□□□ -0.72
USP49-202ENST00000373010 APOBP04114 4563 aaKnown RBP10.52□□□□□ -0.73
USP49-202ENST00000373010 FAT1Q14517 4588 aa10.51□□□□□ -0.73
USP49-202ENST00000373010 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
USP49-202ENST00000373010 IGKV2-30P06310 120 aa10.48□□□□□ -0.73
USP49-202ENST00000373010 Q5VV11 94 aa10.47□□□□□ -0.73
USP49-202ENST00000373010 PRR15LQ9BU68 103 aa10.46□□□□□ -0.74
USP49-202ENST00000373010 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
USP49-202ENST00000373010 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
USP49-202ENST00000373010 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
USP49-202ENST00000373010 IGKV2D-30A0A075B6S6 120 aa10.41□□□□□ -0.74
USP49-202ENST00000373010 ACYP2P14621 99 aa10.38□□□□□ -0.75
USP49-202ENST00000373010 DMAC1Q96GE9 116 aa10.38□□□□□ -0.75
USP49-202ENST00000373010 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
USP49-202ENST00000373010 LINC01558Q9Y6Z2 57 aa10.35□□□□□ -0.75
USP49-202ENST00000373010 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
USP49-202ENST00000373010 C9orf92A6NGG3 77 aa10.31□□□□□ -0.76
USP49-202ENST00000373010 Q75L30 129 aa10.31□□□□□ -0.76
USP49-202ENST00000373010 A8MU10 97 aa10.31□□□□□ -0.76
USP49-202ENST00000373010 A6NED7 52 aa10.23□□□□□ -0.77
USP49-202ENST00000373010 C7orf65Q6ZTY9 151 aa10.22□□□□□ -0.77
USP49-202ENST00000373010 A8MUU9 505 aa10.19□□□□□ -0.78
USP49-202ENST00000373010 C20orf166-AS1Q96NR2 134 aa10.19□□□□□ -0.78
USP49-202ENST00000373010 LCA10Q71F78 164 aa10.18□□□□□ -0.78
USP49-202ENST00000373010 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
USP49-202ENST00000373010 SPINK7P58062 85 aa10.15□□□□□ -0.78
USP49-202ENST00000373010 Q8N1X5 172 aa10.15□□□□□ -0.78
USP49-202ENST00000373010 RYR3Q15413 4870 aa10.14□□□□□ -0.79
USP49-202ENST00000373010 LRP1Q07954 4544 aaKnown RBP10.13□□□□□ -0.79
USP49-202ENST00000373010 Q5VSD8 79 aa10.13□□□□□ -0.79
USP49-202ENST00000373010 HSPG2P98160 4391 aa10.11□□□□□ -0.79
USP49-202ENST00000373010 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
USP49-202ENST00000373010 CDC42SE1Q9NRR8 79 aa10.07□□□□□ -0.8
USP49-202ENST00000373010 TNXBP22105 4242 aa10.07□□□□□ -0.8
USP49-202ENST00000373010 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
USP49-202ENST00000373010 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
USP49-202ENST00000373010 A0A1B0GU69 56 aa10.04□□□□□ -0.8
USP49-202ENST00000373010 KRTAP17-1Q9BYP8 105 aa10.04□□□□□ -0.8
USP49-202ENST00000373010 RYR1P21817 5038 aa10.04□□□□□ -0.8
USP49-202ENST00000373010 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
USP49-202ENST00000373010 ATP11AUNQ6ZP68 121 aa9.98□□□□□ -0.81
USP49-202ENST00000373010 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.81
USP49-202ENST00000373010 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
USP49-202ENST00000373010 SEC61GP60059 68 aa9.93□□□□□ -0.82
USP49-202ENST00000373010 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
USP49-202ENST00000373010 A6NN06 94 aa9.84□□□□□ -0.83
USP49-202ENST00000373010 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
USP49-202ENST00000373010 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
USP49-202ENST00000373010 UQCR11O14957 56 aa9.81□□□□□ -0.84
USP49-202ENST00000373010 XP32Q5T750 250 aa9.81□□□□□ -0.84
USP49-202ENST00000373010 RPL37P61927 97 aaKnown RBP9.81□□□□□ -0.84
USP49-202ENST00000373010 SPATA8Q6RVD6 105 aa9.81□□□□□ -0.84
USP49-202ENST00000373010 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
USP49-202ENST00000373010 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms