RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
CTSA-204ENST00000372484 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
CTSA-204ENST00000372484 NOTCH2NLQ7Z3S9 236 aa10.37□□□□□ -0.75
CTSA-204ENST00000372484 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
CTSA-204ENST00000372484 TRAV22A0A0B4J277 110 aa10.35□□□□□ -0.75
CTSA-204ENST00000372484 TP53AIP1Q9HCN2 124 aa10.35□□□□□ -0.75
CTSA-204ENST00000372484 H3BPC8 53 aa10.34□□□□□ -0.75
CTSA-204ENST00000372484 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
CTSA-204ENST00000372484 NDUFS5O43920 106 aa10.34□□□□□ -0.75
CTSA-204ENST00000372484 Q5XG85 94 aa10.33□□□□□ -0.76
CTSA-204ENST00000372484 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
CTSA-204ENST00000372484 DYNC1H1Q14204 4646 aaKnown RBP10.31□□□□□ -0.76
CTSA-204ENST00000372484 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
CTSA-204ENST00000372484 C1orf64Q8NEQ6 169 aa10.3□□□□□ -0.76
CTSA-204ENST00000372484 LIMD2Q9BT23 127 aa10.3□□□□□ -0.76
CTSA-204ENST00000372484 RYR2Q92736 4967 aa10.29□□□□□ -0.76
CTSA-204ENST00000372484 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
CTSA-204ENST00000372484 KMT2CQ8NEZ4 4911 aaKnown RBP10.28□□□□□ -0.76
CTSA-204ENST00000372484 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
CTSA-204ENST00000372484 SPINK1P00995 79 aa10.24□□□□□ -0.77
CTSA-204ENST00000372484 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
CTSA-204ENST00000372484 LINC00313P59037 77 aa10.22□□□□□ -0.77
CTSA-204ENST00000372484 PRR4Q16378 134 aa10.22□□□□□ -0.77
CTSA-204ENST00000372484 APOBP04114 4563 aaKnown RBP10.2□□□□□ -0.78
CTSA-204ENST00000372484 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
CTSA-204ENST00000372484 LINC00304Q8N9R0 145 aa10.18□□□□□ -0.78
CTSA-204ENST00000372484 CYP4F30PQ9H0H9 118 aa10.18□□□□□ -0.78
CTSA-204ENST00000372484 SMIM26A0A096LP01 95 aa10.16□□□□□ -0.78
CTSA-204ENST00000372484 SPANXA2-OT1Q8N9U9 137 aa10.16□□□□□ -0.78
CTSA-204ENST00000372484 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
CTSA-204ENST00000372484 FAT1Q14517 4588 aa10.15□□□□□ -0.79
CTSA-204ENST00000372484 PCOTHQ58A44 107 aa10.13□□□□□ -0.79
CTSA-204ENST00000372484 Q5W150 140 aa10.13□□□□□ -0.79
CTSA-204ENST00000372484 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
CTSA-204ENST00000372484 RPS29P62273 56 aaKnown RBP10.12□□□□□ -0.79
CTSA-204ENST00000372484 Q8N9P0 234 aaPredicted RBP10.11□□□□□ -0.79
CTSA-204ENST00000372484 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
CTSA-204ENST00000372484 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
CTSA-204ENST00000372484 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
CTSA-204ENST00000372484 C4orf26Q17RF5 130 aa10.08□□□□□ -0.8
CTSA-204ENST00000372484 LOC101927531A0A1B0GV80 90 aa10.07□□□□□ -0.8
CTSA-204ENST00000372484 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
CTSA-204ENST00000372484 FAM229AH3BQW9 127 aa10.05□□□□□ -0.8
CTSA-204ENST00000372484 RETNLBQ9BQ08 111 aa10.02□□□□□ -0.81
CTSA-204ENST00000372484 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
CTSA-204ENST00000372484 RYR3Q15413 4870 aa9.97□□□□□ -0.81
CTSA-204ENST00000372484 PKHD1L1Q86WI1 4243 aa9.95□□□□□ -0.82
CTSA-204ENST00000372484 Q5VSD8 79 aa9.94□□□□□ -0.82
CTSA-204ENST00000372484 COA5Q86WW8 74 aa9.92□□□□□ -0.82
CTSA-204ENST00000372484 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
CTSA-204ENST00000372484 Q1T7F1 81 aa9.88□□□□□ -0.83
CTSA-204ENST00000372484 HSPG2P98160 4391 aa9.88□□□□□ -0.83
CTSA-204ENST00000372484 HRES1P13985 223 aa9.86□□□□□ -0.83
CTSA-204ENST00000372484 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
CTSA-204ENST00000372484 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
CTSA-204ENST00000372484 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
CTSA-204ENST00000372484 Q8N1X5 172 aa9.83□□□□□ -0.84
CTSA-204ENST00000372484 KRTAP10-8P60410 259 aa9.81□□□□□ -0.84
CTSA-204ENST00000372484 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
CTSA-204ENST00000372484 V9GYY9 64 aa9.79□□□□□ -0.84
CTSA-204ENST00000372484 RYR1P21817 5038 aa9.78□□□□□ -0.84
CTSA-204ENST00000372484 ACYP2P14621 99 aa9.77□□□□□ -0.85
CTSA-204ENST00000372484 C20orf166-AS1Q96NR2 134 aa9.77□□□□□ -0.85
CTSA-204ENST00000372484 A8MUU9 505 aa9.76□□□□□ -0.85
CTSA-204ENST00000372484 DMAC1Q96GE9 116 aa9.76□□□□□ -0.85
CTSA-204ENST00000372484 KRTAP17-1Q9BYP8 105 aa9.76□□□□□ -0.85
CTSA-204ENST00000372484 PSPHP1O15172 72 aa9.76□□□□□ -0.85
CTSA-204ENST00000372484 TNXBP22105 4242 aa9.74□□□□□ -0.85
CTSA-204ENST00000372484 C7orf65Q6ZTY9 151 aa9.73□□□□□ -0.85
CTSA-204ENST00000372484 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
CTSA-204ENST00000372484 A8MUN3 132 aa9.7□□□□□ -0.86
CTSA-204ENST00000372484 DMBT1Q9UGM3 2413 aaPredicted RBP9.69□□□□□ -0.86
CTSA-204ENST00000372484 CHKB-CPT1BH3BT56 60 aa9.65□□□□□ -0.86
CTSA-204ENST00000372484 PRR15LQ9BU68 103 aa9.65□□□□□ -0.86
CTSA-204ENST00000372484 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
CTSA-204ENST00000372484 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
CTSA-204ENST00000372484 Q75L30 129 aa9.62□□□□□ -0.87
CTSA-204ENST00000372484 Q5VV11 94 aa9.62□□□□□ -0.87
CTSA-204ENST00000372484 EPPK1P58107 5090 aaKnown RBP9.61□□□□□ -0.87
CTSA-204ENST00000372484 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
CTSA-204ENST00000372484 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
CTSA-204ENST00000372484 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
CTSA-204ENST00000372484 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
CTSA-204ENST00000372484 SPINK7P58062 85 aa9.55□□□□□ -0.88
CTSA-204ENST00000372484 ATP11AUNQ6ZP68 121 aa9.5□□□□□ -0.89
CTSA-204ENST00000372484 XP32Q5T750 250 aa9.46□□□□□ -0.89
CTSA-204ENST00000372484 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
CTSA-204ENST00000372484 A6NED7 52 aa9.43□□□□□ -0.9
CTSA-204ENST00000372484 KRTAP4-5Q9BYR2 181 aa9.41□□□□□ -0.9
CTSA-204ENST00000372484 KRTAP3-1Q9BYR8 98 aa9.4□□□□□ -0.9
CTSA-204ENST00000372484 A0A1B0GU69 56 aa9.38□□□□□ -0.91
CTSA-204ENST00000372484 A8MU10 97 aa9.35□□□□□ -0.91
CTSA-204ENST00000372484 COX6B2Q6YFQ2 88 aa9.34□□□□□ -0.91
CTSA-204ENST00000372484 LCA10Q71F78 164 aa9.32□□□□□ -0.92
CTSA-204ENST00000372484 SPTSSBQ8NFR3 76 aa9.32□□□□□ -0.92
CTSA-204ENST00000372484 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
CTSA-204ENST00000372484 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
CTSA-204ENST00000372484 SEC61GP60059 68 aa9.21□□□□□ -0.94
CTSA-204ENST00000372484 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
CTSA-204ENST00000372484 LRP2P98164 4655 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms