RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 FAM236DA0A1B0GTK5 79 aa9.6□□□□□ -0.87
TMEM53-201ENST00000372235 JMJD7-PLA2G4BH0Y9G9 81 aa9.6□□□□□ -0.87
TMEM53-201ENST00000372235 FAM236CP0DP71 79 aa9.6□□□□□ -0.87
TMEM53-201ENST00000372235 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
TMEM53-201ENST00000372235 NDUFB1O75438 58 aa9.57□□□□□ -0.88
TMEM53-201ENST00000372235 PDE6GP18545 87 aa9.57□□□□□ -0.88
TMEM53-201ENST00000372235 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
TMEM53-201ENST00000372235 Q6ZQT0 140 aa9.55□□□□□ -0.88
TMEM53-201ENST00000372235 MTURNQ8N3F0 131 aa9.55□□□□□ -0.88
TMEM53-201ENST00000372235 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
TMEM53-201ENST00000372235 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
TMEM53-201ENST00000372235 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
TMEM53-201ENST00000372235 HRES1P13985 223 aa9.48□□□□□ -0.89
TMEM53-201ENST00000372235 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
TMEM53-201ENST00000372235 KRTAP9-8Q9BYQ0 159 aa9.46□□□□□ -0.9
TMEM53-201ENST00000372235 A8MWP4 228 aa9.45□□□□□ -0.9
TMEM53-201ENST00000372235 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
TMEM53-201ENST00000372235 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
TMEM53-201ENST00000372235 SPINK7P58062 85 aa9.4□□□□□ -0.9
TMEM53-201ENST00000372235 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
TMEM53-201ENST00000372235 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
TMEM53-201ENST00000372235 TSTD3H0UI37 97 aa9.39□□□□□ -0.91
TMEM53-201ENST00000372235 NREPQ16612 68 aa9.39□□□□□ -0.91
TMEM53-201ENST00000372235 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
TMEM53-201ENST00000372235 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
TMEM53-201ENST00000372235 Q6ZVQ6 151 aa9.35□□□□□ -0.91
TMEM53-201ENST00000372235 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
TMEM53-201ENST00000372235 H3BT86 120 aa9.31□□□□□ -0.92
TMEM53-201ENST00000372235 MT2AP02795 61 aa9.31□□□□□ -0.92
TMEM53-201ENST00000372235 BATFQ16520 125 aa9.3□□□□□ -0.92
TMEM53-201ENST00000372235 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
TMEM53-201ENST00000372235 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
TMEM53-201ENST00000372235 KRTAP10-10P60014 251 aa9.27□□□□□ -0.93
TMEM53-201ENST00000372235 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
TMEM53-201ENST00000372235 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
TMEM53-201ENST00000372235 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
TMEM53-201ENST00000372235 hDV103S1A0JD37 113 aa9.23□□□□□ -0.93
TMEM53-201ENST00000372235 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
TMEM53-201ENST00000372235 MT1FP04733 61 aa9.22□□□□□ -0.93
TMEM53-201ENST00000372235 BPY2O14599 106 aa9.2□□□□□ -0.94
TMEM53-201ENST00000372235 NDUFS5O43920 106 aa9.2□□□□□ -0.94
TMEM53-201ENST00000372235 K7EQZ3 153 aa9.18□□□□□ -0.94
TMEM53-201ENST00000372235 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
TMEM53-201ENST00000372235 TAX1BP3O14907 124 aa9.16□□□□□ -0.94
TMEM53-201ENST00000372235 USH2AO75445 5202 aa9.15□□□□□ -0.95
TMEM53-201ENST00000372235 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
TMEM53-201ENST00000372235 LCE2BO14633 110 aa9.11□□□□□ -0.95
TMEM53-201ENST00000372235 H1FX-AS1Q4G0G2 97 aa9.11□□□□□ -0.95
TMEM53-201ENST00000372235 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
TMEM53-201ENST00000372235 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
TMEM53-201ENST00000372235 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
TMEM53-201ENST00000372235 SSPOA2VEC9 5147 aa9.07□□□□□ -0.96
TMEM53-201ENST00000372235 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
TMEM53-201ENST00000372235 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
TMEM53-201ENST00000372235 LOC105371267A0A1B0GV96 52 aa9.05□□□□□ -0.96
TMEM53-201ENST00000372235 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
TMEM53-201ENST00000372235 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
TMEM53-201ENST00000372235 CXCL6P80162 114 aa9.03□□□□□ -0.96
TMEM53-201ENST00000372235 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
TMEM53-201ENST00000372235 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
TMEM53-201ENST00000372235 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
TMEM53-201ENST00000372235 COL5A1-AS1Q5SY13 56 aa8.99□□□□□ -0.97
TMEM53-201ENST00000372235 Q5W150 140 aa8.98□□□□□ -0.97
TMEM53-201ENST00000372235 Q8N9L7 120 aa8.97□□□□□ -0.97
TMEM53-201ENST00000372235 SMCPP49901 116 aaPredicted RBP8.94□□□□□ -0.98
TMEM53-201ENST00000372235 FCGBPQ9Y6R7 5405 aaPredicted RBP8.91□□□□□ -0.98
TMEM53-201ENST00000372235 K7EP34 96 aa8.9□□□□□ -0.98
TMEM53-201ENST00000372235 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
TMEM53-201ENST00000372235 PRO0461Q9UI25 63 aa8.89□□□□□ -0.99
TMEM53-201ENST00000372235 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
TMEM53-201ENST00000372235 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
TMEM53-201ENST00000372235 TP53AIP1Q9HCN2 124 aa8.87□□□□□ -0.99
TMEM53-201ENST00000372235 F8W1H4 67 aa8.82□□□□□ -1
TMEM53-201ENST00000372235 S4R3F8 94 aa8.76□□□□□ -1.01
TMEM53-201ENST00000372235 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
TMEM53-201ENST00000372235 C1orf64Q8NEQ6 169 aa8.75□□□□□ -1.01
TMEM53-201ENST00000372235 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
TMEM53-201ENST00000372235 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
TMEM53-201ENST00000372235 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
TMEM53-201ENST00000372235 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
TMEM53-201ENST00000372235 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
TMEM53-201ENST00000372235 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
TMEM53-201ENST00000372235 ACYP1P07311 99 aa8.66□□□□□ -1.02
TMEM53-201ENST00000372235 LCA10Q71F78 164 aa8.64□□□□□ -1.03
TMEM53-201ENST00000372235 TRAV22A0A0B4J277 110 aa8.61□□□□□ -1.03
TMEM53-201ENST00000372235 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
TMEM53-201ENST00000372235 ATP5EP2Q5VTU8 51 aa8.6□□□□□ -1.03
TMEM53-201ENST00000372235 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
TMEM53-201ENST00000372235 PCP4L1A6NKN8 68 aa8.57□□□□□ -1.04
TMEM53-201ENST00000372235 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
TMEM53-201ENST00000372235 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
TMEM53-201ENST00000372235 Q5VV11 94 aa8.56□□□□□ -1.04
TMEM53-201ENST00000372235 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
TMEM53-201ENST00000372235 ATOX1O00244 68 aa8.53□□□□□ -1.04
TMEM53-201ENST00000372235 KLKP1Q107X0 134 aa8.53□□□□□ -1.04
TMEM53-201ENST00000372235 KRTAP6-3Q3LI67 103 aa8.52□□□□□ -1.05
TMEM53-201ENST00000372235 UQCRQO14949 82 aa8.51□□□□□ -1.05
TMEM53-201ENST00000372235 CRIPTQ9P021 101 aa8.5□□□□□ -1.05
TMEM53-201ENST00000372235 A6NN06 94 aa8.49□□□□□ -1.05
TMEM53-201ENST00000372235 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms