RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 C8orf17Q9NRJ1 99 aa13.79□□□□□ -0.2
LHX3-201ENST00000371746 APOBP04114 4563 aaKnown RBP13.78□□□□□ -0.2
LHX3-201ENST00000371746 FAT1Q14517 4588 aa13.77□□□□□ -0.2
LHX3-201ENST00000371746 NDUFC1O43677 76 aa13.77□□□□□ -0.21
LHX3-201ENST00000371746 NOTCH2NLQ7Z3S9 236 aa13.76□□□□□ -0.21
LHX3-201ENST00000371746 ASB16-AS1Q495Z4 193 aa13.73□□□□□ -0.21
LHX3-201ENST00000371746 SERP1Q9Y6X1 66 aa13.72□□□□□ -0.21
LHX3-201ENST00000371746 ZCCHC13Q8WW36 166 aaKnown RBP13.7□□□□□ -0.22
LHX3-201ENST00000371746 TYMSOSQ8TAI1 123 aa13.69□□□□□ -0.22
LHX3-201ENST00000371746 MP68P56378 58 aa13.66□□□□□ -0.22
LHX3-201ENST00000371746 H0Y9P7 68 aa13.65□□□□□ -0.22
LHX3-201ENST00000371746 PRR26Q8N8Z3 221 aa13.65□□□□□ -0.22
LHX3-201ENST00000371746 C1orf195Q5TG92 126 aa13.64□□□□□ -0.23
LHX3-201ENST00000371746 LINC00208Q96KT6 92 aa13.64□□□□□ -0.23
LHX3-201ENST00000371746 KRTAP10-4P60372 401 aaPredicted RBP13.63□□□□□ -0.23
LHX3-201ENST00000371746 NDUFS5O43920 106 aa13.62□□□□□ -0.23
LHX3-201ENST00000371746 RYR3Q15413 4870 aa13.62□□□□□ -0.23
LHX3-201ENST00000371746 MRPL34Q9BQ48 92 aaKnown RBP13.61□□□□□ -0.23
LHX3-201ENST00000371746 TRAV22A0A0B4J277 110 aa13.59□□□□□ -0.23
LHX3-201ENST00000371746 C4orf48Q5BLP8 95 aa13.59□□□□□ -0.23
LHX3-201ENST00000371746 LIMD2Q9BT23 127 aa13.57□□□□□ -0.24
LHX3-201ENST00000371746 TP53AIP1Q9HCN2 124 aa13.55□□□□□ -0.24
LHX3-201ENST00000371746 C1orf64Q8NEQ6 169 aa13.53□□□□□ -0.24
LHX3-201ENST00000371746 SPINK1P00995 79 aa13.52□□□□□ -0.24
LHX3-201ENST00000371746 ATP5EP56381 51 aaPredicted RBP13.52□□□□□ -0.24
LHX3-201ENST00000371746 SMIM26A0A096LP01 95 aa13.52□□□□□ -0.25
LHX3-201ENST00000371746 FP248Q71RG6 208 aaPredicted RBP13.52□□□□□ -0.25
LHX3-201ENST00000371746 LINC00304Q8N9R0 145 aa13.5□□□□□ -0.25
LHX3-201ENST00000371746 H3BPC8 53 aa13.5□□□□□ -0.25
LHX3-201ENST00000371746 C8orf87E5RJ46 101 aa13.48□□□□□ -0.25
LHX3-201ENST00000371746 LINC00313P59037 77 aa13.48□□□□□ -0.25
LHX3-201ENST00000371746 PRR4Q16378 134 aa13.47□□□□□ -0.25
LHX3-201ENST00000371746 Q5W150 140 aa13.4□□□□□ -0.26
LHX3-201ENST00000371746 HSPG2P98160 4391 aa13.38□□□□□ -0.27
LHX3-201ENST00000371746 SPAG11AQ6PDA7 123 aa13.38□□□□□ -0.27
LHX3-201ENST00000371746 PCOTHQ58A44 107 aa13.35□□□□□ -0.27
LHX3-201ENST00000371746 PKHD1L1Q86WI1 4243 aa13.35□□□□□ -0.27
LHX3-201ENST00000371746 KRTAP16-1A8MUX0 517 aa13.34□□□□□ -0.27
LHX3-201ENST00000371746 RPS29P62273 56 aaKnown RBP13.34□□□□□ -0.27
LHX3-201ENST00000371746 FAM229AH3BQW9 127 aa13.34□□□□□ -0.27
LHX3-201ENST00000371746 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
LHX3-201ENST00000371746 Q8N9P0 234 aaPredicted RBP13.32□□□□□ -0.28
LHX3-201ENST00000371746 MPLKIPQ8TAP9 179 aa13.32□□□□□ -0.28
LHX3-201ENST00000371746 PRO0628Q9UI54 55 aa13.31□□□□□ -0.28
LHX3-201ENST00000371746 Q5VSD8 79 aa13.29□□□□□ -0.28
LHX3-201ENST00000371746 RETNLBQ9BQ08 111 aa13.29□□□□□ -0.28
LHX3-201ENST00000371746 CYP4F30PQ9H0H9 118 aa13.29□□□□□ -0.28
LHX3-201ENST00000371746 SPANXA2-OT1Q8N9U9 137 aa13.27□□□□□ -0.29
LHX3-201ENST00000371746 LRP1Q07954 4544 aaKnown RBP13.26□□□□□ -0.29
LHX3-201ENST00000371746 RYR1P21817 5038 aa13.25□□□□□ -0.29
LHX3-201ENST00000371746 KRTAP17-1Q9BYP8 105 aa13.22□□□□□ -0.29
LHX3-201ENST00000371746 KIAA1109Q2LD37 5005 aa13.22□□□□□ -0.29
LHX3-201ENST00000371746 LOC101927531A0A1B0GV80 90 aa13.21□□□□□ -0.29
LHX3-201ENST00000371746 BRK1Q8WUW1 75 aa13.19□□□□□ -0.3
LHX3-201ENST00000371746 IGLV7-46A0A075B6I9 117 aa13.18□□□□□ -0.3
LHX3-201ENST00000371746 FLG2Q5D862 2391 aaPredicted RBP13.17□□□□□ -0.3
LHX3-201ENST00000371746 EPPK1P58107 5090 aaKnown RBP13.13□□□□□ -0.31
LHX3-201ENST00000371746 Q8N1X5 172 aa13.13□□□□□ -0.31
LHX3-201ENST00000371746 C9orf92A6NGG3 77 aa13.11□□□□□ -0.31
LHX3-201ENST00000371746 TNXBP22105 4242 aa13.11□□□□□ -0.31
LHX3-201ENST00000371746 KRTAP10-8P60410 259 aa13.07□□□□□ -0.32
LHX3-201ENST00000371746 IGKV2-30P06310 120 aa13.05□□□□□ -0.32
LHX3-201ENST00000371746 MYCBP2O75592 4640 aa13.04□□□□□ -0.32
LHX3-201ENST00000371746 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
LHX3-201ENST00000371746 IGKV2D-30A0A075B6S6 120 aa13.01□□□□□ -0.33
LHX3-201ENST00000371746 COA5Q86WW8 74 aa13□□□□□ -0.33
LHX3-201ENST00000371746 HRES1P13985 223 aa13□□□□□ -0.33
LHX3-201ENST00000371746 Q1T7F1 81 aa12.99□□□□□ -0.33
LHX3-201ENST00000371746 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.33
LHX3-201ENST00000371746 PSPHP1O15172 72 aa12.93□□□□□ -0.34
LHX3-201ENST00000371746 C20orf166-AS1Q96NR2 134 aa12.92□□□□□ -0.34
LHX3-201ENST00000371746 A8MUU9 505 aa12.9□□□□□ -0.34
LHX3-201ENST00000371746 MT1HL1P0DM35 61 aa12.84□□□□□ -0.35
LHX3-201ENST00000371746 DMAC1Q96GE9 116 aa12.82□□□□□ -0.36
LHX3-201ENST00000371746 C7orf65Q6ZTY9 151 aa12.81□□□□□ -0.36
LHX3-201ENST00000371746 A8MUN3 132 aa12.79□□□□□ -0.36
LHX3-201ENST00000371746 ACYP2P14621 99 aa12.78□□□□□ -0.36
LHX3-201ENST00000371746 V9GYY9 64 aa12.76□□□□□ -0.37
LHX3-201ENST00000371746 Q75L30 129 aa12.72□□□□□ -0.37
LHX3-201ENST00000371746 KRTAP4-5Q9BYR2 181 aa12.72□□□□□ -0.37
LHX3-201ENST00000371746 Q5VV11 94 aa12.69□□□□□ -0.38
LHX3-201ENST00000371746 CHKB-CPT1BH3BT56 60 aa12.64□□□□□ -0.39
LHX3-201ENST00000371746 SPINK7P58062 85 aa12.63□□□□□ -0.39
LHX3-201ENST00000371746 A8MU10 97 aa12.62□□□□□ -0.39
LHX3-201ENST00000371746 PRR15LQ9BU68 103 aa12.61□□□□□ -0.39
LHX3-201ENST00000371746 XP32Q5T750 250 aa12.59□□□□□ -0.39
LHX3-201ENST00000371746 ATP11AUNQ6ZP68 121 aa12.56□□□□□ -0.4
LHX3-201ENST00000371746 RPL37P61927 97 aaKnown RBP12.53□□□□□ -0.4
LHX3-201ENST00000371746 LINC01558Q9Y6Z2 57 aa12.53□□□□□ -0.4
LHX3-201ENST00000371746 PMAIP1Q13794 54 aa12.53□□□□□ -0.4
LHX3-201ENST00000371746 ABCA13Q86UQ4 5058 aa12.5□□□□□ -0.41
LHX3-201ENST00000371746 KRTAP3-1Q9BYR8 98 aa12.46□□□□□ -0.41
LHX3-201ENST00000371746 A6NED7 52 aa12.42□□□□□ -0.42
LHX3-201ENST00000371746 LCA10Q71F78 164 aa12.4□□□□□ -0.42
LHX3-201ENST00000371746 SPTSSBQ8NFR3 76 aa12.39□□□□□ -0.43
LHX3-201ENST00000371746 SEC61GP60059 68 aa12.37□□□□□ -0.43
LHX3-201ENST00000371746 HERC2O95714 4834 aa12.37□□□□□ -0.43
LHX3-201ENST00000371746 LRP2P98164 4655 aa12.35□□□□□ -0.43
LHX3-201ENST00000371746 TPRXLQ17RH7 258 aa12.34□□□□□ -0.43
LHX3-201ENST00000371746 LPAP08519 4548 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms