RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SPINK6Q6UWN8 80 aa17■□□□□ 0.31
SSBP3-204ENST00000371320 SPANXA2-OT1Q8N9U9 137 aa17■□□□□ 0.31
SSBP3-204ENST00000371320 NDUFS5O43920 106 aa16.99■□□□□ 0.31
SSBP3-204ENST00000371320 MRPL34Q9BQ48 92 aaKnown RBP16.98■□□□□ 0.31
SSBP3-204ENST00000371320 A0A087X002 238 aa16.97■□□□□ 0.31
SSBP3-204ENST00000371320 NOTCH2NLQ7Z3S9 236 aa16.97■□□□□ 0.31
SSBP3-204ENST00000371320 PKD1P98161 4303 aa16.96■□□□□ 0.31
SSBP3-204ENST00000371320 FAT2Q9NYQ8 4349 aa16.93■□□□□ 0.3
SSBP3-204ENST00000371320 HYDINQ4G0P3 5121 aa16.92■□□□□ 0.3
SSBP3-204ENST00000371320 LRP1BQ9NZR2 4599 aa16.87■□□□□ 0.29
SSBP3-204ENST00000371320 KRTAP13-2Q52LG2 175 aa16.85■□□□□ 0.29
SSBP3-204ENST00000371320 LINC00336Q6ZUF6 198 aa16.81■□□□□ 0.28
SSBP3-204ENST00000371320 PCOTHQ58A44 107 aa16.81■□□□□ 0.28
SSBP3-204ENST00000371320 IGLV7-46A0A075B6I9 117 aa16.79■□□□□ 0.28
SSBP3-204ENST00000371320 Q1T7F1 81 aa16.77■□□□□ 0.28
SSBP3-204ENST00000371320 C8orf87E5RJ46 101 aa16.75■□□□□ 0.27
SSBP3-204ENST00000371320 KRTAP1-4P0C5Y4 121 aa16.72■□□□□ 0.27
SSBP3-204ENST00000371320 SACSQ9NZJ4 4579 aa16.69■□□□□ 0.26
SSBP3-204ENST00000371320 C1orf195Q5TG92 126 aa16.69■□□□□ 0.26
SSBP3-204ENST00000371320 Q5W150 140 aa16.66■□□□□ 0.26
SSBP3-204ENST00000371320 LINC00313P59037 77 aa16.65■□□□□ 0.26
SSBP3-204ENST00000371320 VPS13BQ7Z7G8 4022 aa16.64■□□□□ 0.25
SSBP3-204ENST00000371320 LOC101927531A0A1B0GV80 90 aa16.63■□□□□ 0.25
SSBP3-204ENST00000371320 KRTAP13-3Q3SY46 172 aa16.61■□□□□ 0.25
SSBP3-204ENST00000371320 COA5Q86WW8 74 aa16.61■□□□□ 0.25
SSBP3-204ENST00000371320 PRO0628Q9UI54 55 aa16.61■□□□□ 0.25
SSBP3-204ENST00000371320 PLA2G1BP04054 148 aaKnown RBP16.6■□□□□ 0.25
SSBP3-204ENST00000371320 LIMD2Q9BT23 127 aa16.6■□□□□ 0.25
SSBP3-204ENST00000371320 V9GYY9 64 aa16.59■□□□□ 0.25
SSBP3-204ENST00000371320 BRK1Q8WUW1 75 aa16.57■□□□□ 0.24
SSBP3-204ENST00000371320 PSPHP1O15172 72 aa16.55■□□□□ 0.24
SSBP3-204ENST00000371320 Q8N9P0 234 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-204ENST00000371320 TYMSOSQ8TAI1 123 aa16.54■□□□□ 0.24
SSBP3-204ENST00000371320 C4orf48Q5BLP8 95 aa16.53■□□□□ 0.24
SSBP3-204ENST00000371320 PKHD1P08F94 4074 aa16.47■□□□□ 0.23
SSBP3-204ENST00000371320 FAM229AH3BQW9 127 aa16.46■□□□□ 0.23
SSBP3-204ENST00000371320 A8MUN3 132 aa16.44■□□□□ 0.22
SSBP3-204ENST00000371320 SPINK1P00995 79 aa16.44■□□□□ 0.22
SSBP3-204ENST00000371320 KRTAP16-1A8MUX0 517 aa16.42■□□□□ 0.22
SSBP3-204ENST00000371320 HRES1P13985 223 aa16.4■□□□□ 0.22
SSBP3-204ENST00000371320 RETNLBQ9BQ08 111 aa16.4■□□□□ 0.22
SSBP3-204ENST00000371320 PRR26Q8N8Z3 221 aa16.34■□□□□ 0.21
SSBP3-204ENST00000371320 SMR3BP02814 79 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-204ENST00000371320 Q5VV11 94 aa16.33■□□□□ 0.21
SSBP3-204ENST00000371320 PRR15LQ9BU68 103 aa16.31■□□□□ 0.2
SSBP3-204ENST00000371320 DYNC1H1Q14204 4646 aaKnown RBP16.31■□□□□ 0.2
SSBP3-204ENST00000371320 RYR2Q92736 4967 aa16.3■□□□□ 0.2
SSBP3-204ENST00000371320 LINC00304Q8N9R0 145 aa16.3■□□□□ 0.2
SSBP3-204ENST00000371320 A0A1B0GVY2 172 aa16.28■□□□□ 0.2
SSBP3-204ENST00000371320 IGKV2-30P06310 120 aa16.28■□□□□ 0.2
SSBP3-204ENST00000371320 KMT2CQ8NEZ4 4911 aaKnown RBP16.27■□□□□ 0.2
SSBP3-204ENST00000371320 SPAG11AQ6PDA7 123 aa16.24■□□□□ 0.19
SSBP3-204ENST00000371320 RPS29P62273 56 aaKnown RBP16.23■□□□□ 0.19
SSBP3-204ENST00000371320 ACYP2P14621 99 aa16.22■□□□□ 0.19
SSBP3-204ENST00000371320 CHKB-CPT1BH3BT56 60 aa16.2■□□□□ 0.18
SSBP3-204ENST00000371320 LINC01558Q9Y6Z2 57 aa16.18■□□□□ 0.18
SSBP3-204ENST00000371320 DMAC1Q96GE9 116 aa16.17■□□□□ 0.18
SSBP3-204ENST00000371320 Q75L30 129 aa16.14■□□□□ 0.17
SSBP3-204ENST00000371320 IGKV2D-30A0A075B6S6 120 aa16.12■□□□□ 0.17
SSBP3-204ENST00000371320 KRTAP10-4P60372 401 aaPredicted RBP16.11■□□□□ 0.17
SSBP3-204ENST00000371320 APOBP04114 4563 aaKnown RBP16.11■□□□□ 0.17
SSBP3-204ENST00000371320 FAT1Q14517 4588 aa16.08■□□□□ 0.16
SSBP3-204ENST00000371320 A6NED7 52 aa15.99■□□□□ 0.15
SSBP3-204ENST00000371320 A8MU10 97 aa15.96■□□□□ 0.15
SSBP3-204ENST00000371320 PKHD1L1Q86WI1 4243 aa15.95■□□□□ 0.14
SSBP3-204ENST00000371320 RYR3Q15413 4870 aa15.92■□□□□ 0.14
SSBP3-204ENST00000371320 C7orf65Q6ZTY9 151 aa15.88■□□□□ 0.13
SSBP3-204ENST00000371320 C9orf92A6NGG3 77 aa15.88■□□□□ 0.13
SSBP3-204ENST00000371320 LCA10Q71F78 164 aa15.87■□□□□ 0.13
SSBP3-204ENST00000371320 C20orf166-AS1Q96NR2 134 aa15.8■□□□□ 0.12
SSBP3-204ENST00000371320 A8MUU9 505 aa15.79■□□□□ 0.12
SSBP3-204ENST00000371320 SPINK7P58062 85 aa15.79■□□□□ 0.12
SSBP3-204ENST00000371320 CDC42SE1Q9NRR8 79 aa15.79■□□□□ 0.12
SSBP3-204ENST00000371320 SPTSSBQ8NFR3 76 aa15.71■□□□□ 0.1
SSBP3-204ENST00000371320 ATP11AUNQ6ZP68 121 aa15.69■□□□□ 0.1
SSBP3-204ENST00000371320 Q8N1X5 172 aa15.69■□□□□ 0.1
SSBP3-204ENST00000371320 A0A1B0GU69 56 aa15.68■□□□□ 0.1
SSBP3-204ENST00000371320 PMAIP1Q13794 54 aa15.67■□□□□ 0.1
SSBP3-204ENST00000371320 FLG2Q5D862 2391 aaPredicted RBP15.58■□□□□ 0.08
SSBP3-204ENST00000371320 Q5VSD8 79 aa15.55■□□□□ 0.08
SSBP3-204ENST00000371320 KRTAP10-8P60410 259 aa15.52■□□□□ 0.08
SSBP3-204ENST00000371320 HSPG2P98160 4391 aa15.5■□□□□ 0.07
SSBP3-204ENST00000371320 TNXBP22105 4242 aa15.46■□□□□ 0.07
SSBP3-204ENST00000371320 LRP1Q07954 4544 aaKnown RBP15.45■□□□□ 0.06
SSBP3-204ENST00000371320 FAT3Q8TDW7 4589 aa15.44■□□□□ 0.06
SSBP3-204ENST00000371320 RYR1P21817 5038 aa15.4■□□□□ 0.06
SSBP3-204ENST00000371320 A6NN06 94 aa15.39■□□□□ 0.05
SSBP3-204ENST00000371320 KRTAP3-1Q9BYR8 98 aa15.39■□□□□ 0.05
SSBP3-204ENST00000371320 UQCR11O14957 56 aa15.36■□□□□ 0.05
SSBP3-204ENST00000371320 SPATA8Q6RVD6 105 aa15.33■□□□□ 0.04
SSBP3-204ENST00000371320 KRTAP17-1Q9BYP8 105 aa15.33■□□□□ 0.04
SSBP3-204ENST00000371320 EPPK1P58107 5090 aaKnown RBP15.33■□□□□ 0.04
SSBP3-204ENST00000371320 SEC61GP60059 68 aa15.29■□□□□ 0.04
SSBP3-204ENST00000371320 MIR22HGQ0VDD5 57 aa15.29■□□□□ 0.04
SSBP3-204ENST00000371320 KIAA1109Q2LD37 5005 aa15.26■□□□□ 0.03
SSBP3-204ENST00000371320 KTN1-AS1Q86SY8 53 aa15.24■□□□□ 0.03
SSBP3-204ENST00000371320 COX6B2Q6YFQ2 88 aa15.22■□□□□ 0.03
SSBP3-204ENST00000371320 DMBT1Q9UGM3 2413 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-204ENST00000371320 RPL37P61927 97 aaKnown RBP15.16■□□□□ 0.02
SSBP3-204ENST00000371320 XP32Q5T750 250 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms