RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 LINC00304Q8N9R0 145 aa10.04□□□□□ -0.8
SSBP3-203ENST00000371319 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
SSBP3-203ENST00000371319 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
SSBP3-203ENST00000371319 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
SSBP3-203ENST00000371319 IGHV6-1A0A0B4J1U7 121 aa10.01□□□□□ -0.81
SSBP3-203ENST00000371319 SPAG11AQ6PDA7 123 aa10.01□□□□□ -0.81
SSBP3-203ENST00000371319 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
SSBP3-203ENST00000371319 KIAA1109Q2LD37 5005 aa9.98□□□□□ -0.81
SSBP3-203ENST00000371319 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
SSBP3-203ENST00000371319 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
SSBP3-203ENST00000371319 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
SSBP3-203ENST00000371319 Q8N1X5 172 aa9.94□□□□□ -0.82
SSBP3-203ENST00000371319 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
SSBP3-203ENST00000371319 C8orf87E5RJ46 101 aa9.91□□□□□ -0.82
SSBP3-203ENST00000371319 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
SSBP3-203ENST00000371319 KRTAP10-8P60410 259 aa9.89□□□□□ -0.83
SSBP3-203ENST00000371319 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
SSBP3-203ENST00000371319 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
SSBP3-203ENST00000371319 FAT3Q8TDW7 4589 aa9.87□□□□□ -0.83
SSBP3-203ENST00000371319 A0A0U1RQV1 116 aa9.87□□□□□ -0.83
SSBP3-203ENST00000371319 SNURFQ9Y675 71 aa9.87□□□□□ -0.83
SSBP3-203ENST00000371319 TNXBP22105 4242 aa9.86□□□□□ -0.83
SSBP3-203ENST00000371319 LINC00313P59037 77 aa9.85□□□□□ -0.83
SSBP3-203ENST00000371319 C5orf47Q569G3 176 aa9.84□□□□□ -0.83
SSBP3-203ENST00000371319 LRP1Q07954 4544 aaKnown RBP9.84□□□□□ -0.83
SSBP3-203ENST00000371319 KRTAP16-1A8MUX0 517 aa9.8□□□□□ -0.84
SSBP3-203ENST00000371319 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
SSBP3-203ENST00000371319 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
SSBP3-203ENST00000371319 NDUFS5O43920 106 aa9.79□□□□□ -0.84
SSBP3-203ENST00000371319 H0Y9P7 68 aa9.78□□□□□ -0.84
SSBP3-203ENST00000371319 H7BZZ5 65 aa9.78□□□□□ -0.84
SSBP3-203ENST00000371319 MP68P56378 58 aa9.75□□□□□ -0.85
SSBP3-203ENST00000371319 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
SSBP3-203ENST00000371319 MT1HL1P0DM35 61 aa9.75□□□□□ -0.85
SSBP3-203ENST00000371319 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-203ENST00000371319 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-203ENST00000371319 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
SSBP3-203ENST00000371319 NDUFC1O43677 76 aa9.73□□□□□ -0.85
SSBP3-203ENST00000371319 TMEM258P61165 79 aa9.73□□□□□ -0.85
SSBP3-203ENST00000371319 H3BPC8 53 aa9.72□□□□□ -0.85
SSBP3-203ENST00000371319 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
SSBP3-203ENST00000371319 LINC00208Q96KT6 92 aa9.71□□□□□ -0.85
SSBP3-203ENST00000371319 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
SSBP3-203ENST00000371319 Q5W150 140 aa9.68□□□□□ -0.86
SSBP3-203ENST00000371319 BIRC6Q9NR09 4857 aa9.68□□□□□ -0.86
SSBP3-203ENST00000371319 C1orf64Q8NEQ6 169 aa9.67□□□□□ -0.86
SSBP3-203ENST00000371319 OXTP01178 125 aa9.65□□□□□ -0.86
SSBP3-203ENST00000371319 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
SSBP3-203ENST00000371319 FAM236DA0A1B0GTK5 79 aa9.63□□□□□ -0.87
SSBP3-203ENST00000371319 FAM236CP0DP71 79 aa9.63□□□□□ -0.87
SSBP3-203ENST00000371319 MYCBP2O75592 4640 aa9.62□□□□□ -0.87
SSBP3-203ENST00000371319 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-203ENST00000371319 HERC2O95714 4834 aa9.59□□□□□ -0.87
SSBP3-203ENST00000371319 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
SSBP3-203ENST00000371319 A8MUU9 505 aa9.56□□□□□ -0.88
SSBP3-203ENST00000371319 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
SSBP3-203ENST00000371319 ATP5EP56381 51 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-203ENST00000371319 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
SSBP3-203ENST00000371319 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SSBP3-203ENST00000371319 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-203ENST00000371319 IGLV7-46A0A075B6I9 117 aa9.5□□□□□ -0.89
SSBP3-203ENST00000371319 CYP4F30PQ9H0H9 118 aa9.5□□□□□ -0.89
SSBP3-203ENST00000371319 IGKV2-30P06310 120 aa9.5□□□□□ -0.89
SSBP3-203ENST00000371319 LCE2DQ5TA82 110 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-203ENST00000371319 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
SSBP3-203ENST00000371319 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.9
SSBP3-203ENST00000371319 Q75L30 129 aa9.46□□□□□ -0.9
SSBP3-203ENST00000371319 PRR4Q16378 134 aa9.45□□□□□ -0.9
SSBP3-203ENST00000371319 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
SSBP3-203ENST00000371319 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.9
SSBP3-203ENST00000371319 XP32Q5T750 250 aa9.39□□□□□ -0.91
SSBP3-203ENST00000371319 HRES1P13985 223 aa9.36□□□□□ -0.91
SSBP3-203ENST00000371319 J3QL48 77 aa9.35□□□□□ -0.91
SSBP3-203ENST00000371319 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
SSBP3-203ENST00000371319 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
SSBP3-203ENST00000371319 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
SSBP3-203ENST00000371319 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
SSBP3-203ENST00000371319 SPINK7P58062 85 aa9.24□□□□□ -0.93
SSBP3-203ENST00000371319 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
SSBP3-203ENST00000371319 COA5Q86WW8 74 aa9.22□□□□□ -0.93
SSBP3-203ENST00000371319 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
SSBP3-203ENST00000371319 ACYP2P14621 99 aa9.16□□□□□ -0.94
SSBP3-203ENST00000371319 LPAP08519 4548 aa9.16□□□□□ -0.94
SSBP3-203ENST00000371319 C4orf26Q17RF5 130 aa9.15□□□□□ -0.95
SSBP3-203ENST00000371319 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
SSBP3-203ENST00000371319 LRP2P98164 4655 aa9.11□□□□□ -0.95
SSBP3-203ENST00000371319 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
SSBP3-203ENST00000371319 A8MUN3 132 aa9.07□□□□□ -0.96
SSBP3-203ENST00000371319 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
SSBP3-203ENST00000371319 COX6B2Q6YFQ2 88 aa9.03□□□□□ -0.96
SSBP3-203ENST00000371319 CHKB-CPT1BH3BT56 60 aa9.01□□□□□ -0.97
SSBP3-203ENST00000371319 Q1T7F1 81 aa9.01□□□□□ -0.97
SSBP3-203ENST00000371319 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
SSBP3-203ENST00000371319 MUC17Q685J3 4493 aa8.96□□□□□ -0.98
SSBP3-203ENST00000371319 V9GYY9 64 aa8.92□□□□□ -0.98
SSBP3-203ENST00000371319 HMCN2Q8NDA2 5059 aa8.9□□□□□ -0.98
SSBP3-203ENST00000371319 HERC1Q15751 4861 aa8.9□□□□□ -0.98
SSBP3-203ENST00000371319 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
SSBP3-203ENST00000371319 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
SSBP3-203ENST00000371319 PSPHP1O15172 72 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms