RNA–Protein interactions for RNA: ENST00000371116.3

FOXD3-201, Transcript of forkhead box D3, humanhuman

APPRIS P1 BASIC

Gene FOXD3, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3-201ENST00000371116 TRAV22A0A0B4J277 110 aa15.9■□□□□ 0.14
FOXD3-201ENST00000371116 SACSQ9NZJ4 4579 aa15.88■□□□□ 0.13
FOXD3-201ENST00000371116 MRPL34Q9BQ48 92 aaKnown RBP15.87■□□□□ 0.13
FOXD3-201ENST00000371116 Q5XG85 94 aa15.86■□□□□ 0.13
FOXD3-201ENST00000371116 NOTCH2NLQ7Z3S9 236 aa15.84■□□□□ 0.13
FOXD3-201ENST00000371116 C1orf64Q8NEQ6 169 aa15.83■□□□□ 0.13
FOXD3-201ENST00000371116 A0A1B0GVY2 172 aa15.8■□□□□ 0.12
FOXD3-201ENST00000371116 NDUFS5O43920 106 aa15.8■□□□□ 0.12
FOXD3-201ENST00000371116 PLA2G1BP04054 148 aaKnown RBP15.8■□□□□ 0.12
FOXD3-201ENST00000371116 VPS13BQ7Z7G8 4022 aa15.8■□□□□ 0.12
FOXD3-201ENST00000371116 SMIM26A0A096LP01 95 aa15.77■□□□□ 0.11
FOXD3-201ENST00000371116 C8orf87E5RJ46 101 aa15.76■□□□□ 0.11
FOXD3-201ENST00000371116 C4orf26Q17RF5 130 aa15.74■□□□□ 0.11
FOXD3-201ENST00000371116 C1orf195Q5TG92 126 aa15.74■□□□□ 0.11
FOXD3-201ENST00000371116 LIMD2Q9BT23 127 aa15.74■□□□□ 0.11
FOXD3-201ENST00000371116 CYP4F30PQ9H0H9 118 aa15.74■□□□□ 0.11
FOXD3-201ENST00000371116 PKHD1P08F94 4074 aa15.73■□□□□ 0.11
FOXD3-201ENST00000371116 SPANXA2-OT1Q8N9U9 137 aa15.71■□□□□ 0.11
FOXD3-201ENST00000371116 TYMSOSQ8TAI1 123 aa15.71■□□□□ 0.11
FOXD3-201ENST00000371116 C4orf48Q5BLP8 95 aa15.68■□□□□ 0.1
FOXD3-201ENST00000371116 PRR4Q16378 134 aa15.66■□□□□ 0.1
FOXD3-201ENST00000371116 PRO0628Q9UI54 55 aa15.64■□□□□ 0.09
FOXD3-201ENST00000371116 SMR3BP02814 79 aaPredicted RBP15.64■□□□□ 0.09
FOXD3-201ENST00000371116 LINC00313P59037 77 aa15.64■□□□□ 0.09
FOXD3-201ENST00000371116 SPINK1P00995 79 aa15.63■□□□□ 0.09
FOXD3-201ENST00000371116 FP248Q71RG6 208 aaPredicted RBP15.63■□□□□ 0.09
FOXD3-201ENST00000371116 DYNC1H1Q14204 4646 aaKnown RBP15.58■□□□□ 0.09
FOXD3-201ENST00000371116 PRR26Q8N8Z3 221 aa15.55■□□□□ 0.08
FOXD3-201ENST00000371116 IGLV7-46A0A075B6I9 117 aa15.52■□□□□ 0.08
FOXD3-201ENST00000371116 KRTAP13-3Q3SY46 172 aa15.52■□□□□ 0.08
FOXD3-201ENST00000371116 PCOTHQ58A44 107 aa15.52■□□□□ 0.08
FOXD3-201ENST00000371116 Q5W150 140 aa15.52■□□□□ 0.07
FOXD3-201ENST00000371116 Q8N9P0 234 aaPredicted RBP15.51■□□□□ 0.07
FOXD3-201ENST00000371116 LINC00304Q8N9R0 145 aa15.51■□□□□ 0.07
FOXD3-201ENST00000371116 KRTAP10-4P60372 401 aaPredicted RBP15.5■□□□□ 0.07
FOXD3-201ENST00000371116 RPS29P62273 56 aaKnown RBP15.5■□□□□ 0.07
FOXD3-201ENST00000371116 RYR2Q92736 4967 aa15.5■□□□□ 0.07
FOXD3-201ENST00000371116 LOC101927531A0A1B0GV80 90 aa15.5■□□□□ 0.07
FOXD3-201ENST00000371116 SPAG11AQ6PDA7 123 aa15.49■□□□□ 0.07
FOXD3-201ENST00000371116 KRTAP16-1A8MUX0 517 aa15.44■□□□□ 0.06
FOXD3-201ENST00000371116 FAM229AH3BQW9 127 aa15.42■□□□□ 0.06
FOXD3-201ENST00000371116 APOBP04114 4563 aaKnown RBP15.41■□□□□ 0.06
FOXD3-201ENST00000371116 MPLKIPQ8TAP9 179 aa15.41■□□□□ 0.06
FOXD3-201ENST00000371116 KMT2CQ8NEZ4 4911 aaKnown RBP15.33■□□□□ 0.04
FOXD3-201ENST00000371116 Q1T7F1 81 aa15.31■□□□□ 0.04
FOXD3-201ENST00000371116 FAT1Q14517 4588 aa15.28■□□□□ 0.04
FOXD3-201ENST00000371116 COA5Q86WW8 74 aa15.28■□□□□ 0.04
FOXD3-201ENST00000371116 RETNLBQ9BQ08 111 aa15.26■□□□□ 0.03
FOXD3-201ENST00000371116 IGKV2-30P06310 120 aa15.21■□□□□ 0.03
FOXD3-201ENST00000371116 V9GYY9 64 aa15.18■□□□□ 0.02
FOXD3-201ENST00000371116 PKHD1L1Q86WI1 4243 aa15.16■□□□□ 0.02
FOXD3-201ENST00000371116 HRES1P13985 223 aa15.13■□□□□ 0.01
FOXD3-201ENST00000371116 BRK1Q8WUW1 75 aa15.08■□□□□ 0
FOXD3-201ENST00000371116 IGKV2D-30A0A075B6S6 120 aa15.04■□□□□ -0
FOXD3-201ENST00000371116 ACYP2P14621 99 aa15.04■□□□□ -0
FOXD3-201ENST00000371116 Q5VSD8 79 aa15.03■□□□□ -0
FOXD3-201ENST00000371116 DMAC1Q96GE9 116 aa15.03■□□□□ -0
FOXD3-201ENST00000371116 PSPHP1O15172 72 aa15.02■□□□□ -0
FOXD3-201ENST00000371116 C9orf92A6NGG3 77 aa14.97□□□□□ -0.01
FOXD3-201ENST00000371116 C20orf166-AS1Q96NR2 134 aa14.96□□□□□ -0.01
FOXD3-201ENST00000371116 A8MUN3 132 aa14.96□□□□□ -0.02
FOXD3-201ENST00000371116 A8MUU9 505 aa14.94□□□□□ -0.02
FOXD3-201ENST00000371116 KRTAP10-8P60410 259 aa14.93□□□□□ -0.02
FOXD3-201ENST00000371116 SEC61GP60059 68 aa14.92□□□□□ -0.02
FOXD3-201ENST00000371116 Q8N1X5 172 aa14.92□□□□□ -0.02
FOXD3-201ENST00000371116 RYR3Q15413 4870 aa14.92□□□□□ -0.02
FOXD3-201ENST00000371116 C7orf65Q6ZTY9 151 aa14.91□□□□□ -0.02
FOXD3-201ENST00000371116 HSPG2P98160 4391 aa14.89□□□□□ -0.03
FOXD3-201ENST00000371116 Q5VV11 94 aa14.88□□□□□ -0.03
FOXD3-201ENST00000371116 PRR15LQ9BU68 103 aa14.87□□□□□ -0.03
FOXD3-201ENST00000371116 LINC01558Q9Y6Z2 57 aa14.86□□□□□ -0.03
FOXD3-201ENST00000371116 FLG2Q5D862 2391 aaPredicted RBP14.85□□□□□ -0.03
FOXD3-201ENST00000371116 CHKB-CPT1BH3BT56 60 aa14.83□□□□□ -0.04
FOXD3-201ENST00000371116 RYR1P21817 5038 aa14.76□□□□□ -0.05
FOXD3-201ENST00000371116 TNXBP22105 4242 aa14.75□□□□□ -0.05
FOXD3-201ENST00000371116 Q75L30 129 aa14.75□□□□□ -0.05
FOXD3-201ENST00000371116 KRTAP17-1Q9BYP8 105 aa14.73□□□□□ -0.05
FOXD3-201ENST00000371116 PMAIP1Q13794 54 aa14.72□□□□□ -0.05
FOXD3-201ENST00000371116 LRP1Q07954 4544 aaKnown RBP14.7□□□□□ -0.06
FOXD3-201ENST00000371116 FAT3Q8TDW7 4589 aa14.62□□□□□ -0.07
FOXD3-201ENST00000371116 SPINK7P58062 85 aa14.59□□□□□ -0.07
FOXD3-201ENST00000371116 A6NED7 52 aa14.55□□□□□ -0.08
FOXD3-201ENST00000371116 MT1HL1P0DM35 61 aa14.55□□□□□ -0.08
FOXD3-201ENST00000371116 KIAA1109Q2LD37 5005 aa14.53□□□□□ -0.08
FOXD3-201ENST00000371116 ATP11AUNQ6ZP68 121 aa14.48□□□□□ -0.09
FOXD3-201ENST00000371116 DMBT1Q9UGM3 2413 aaPredicted RBP14.48□□□□□ -0.09
FOXD3-201ENST00000371116 RPL37P61927 97 aaKnown RBP14.44□□□□□ -0.1
FOXD3-201ENST00000371116 A0A1B0GU69 56 aa14.43□□□□□ -0.1
FOXD3-201ENST00000371116 A8MU10 97 aa14.41□□□□□ -0.1
FOXD3-201ENST00000371116 XP32Q5T750 250 aa14.41□□□□□ -0.1
FOXD3-201ENST00000371116 LCA10Q71F78 164 aa14.41□□□□□ -0.1
FOXD3-201ENST00000371116 KRTAP3-1Q9BYR8 98 aa14.4□□□□□ -0.1
FOXD3-201ENST00000371116 CDC42SE1Q9NRR8 79 aa14.38□□□□□ -0.11
FOXD3-201ENST00000371116 EPPK1P58107 5090 aaKnown RBP14.37□□□□□ -0.11
FOXD3-201ENST00000371116 SPTSSBQ8NFR3 76 aa14.35□□□□□ -0.11
FOXD3-201ENST00000371116 MYCBP2O75592 4640 aa14.33□□□□□ -0.12
FOXD3-201ENST00000371116 COX6B2Q6YFQ2 88 aa14.32□□□□□ -0.12
FOXD3-201ENST00000371116 KTN1-AS1Q86SY8 53 aa14.26□□□□□ -0.13
FOXD3-201ENST00000371116 KRTAP4-5Q9BYR2 181 aa14.15□□□□□ -0.14
FOXD3-201ENST00000371116 TPRXLQ17RH7 258 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms