RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SPRR1AP35321 89 aa9.17□□□□□ -0.94
LMO4-201ENST00000370542 MP68P56378 58 aa9.17□□□□□ -0.94
LMO4-201ENST00000370542 SEC61GP60059 68 aa9.17□□□□□ -0.94
LMO4-201ENST00000370542 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
LMO4-201ENST00000370542 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
LMO4-201ENST00000370542 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
LMO4-201ENST00000370542 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
LMO4-201ENST00000370542 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
LMO4-201ENST00000370542 Q6ZRP5 223 aa9.14□□□□□ -0.95
LMO4-201ENST00000370542 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
LMO4-201ENST00000370542 MRPL55Q7Z7F7 128 aaKnown RBP9.13□□□□□ -0.95
LMO4-201ENST00000370542 FAT4Q6V0I7 4981 aa9.12□□□□□ -0.95
LMO4-201ENST00000370542 DSCR10P59022 87 aa9.12□□□□□ -0.95
LMO4-201ENST00000370542 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
LMO4-201ENST00000370542 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
LMO4-201ENST00000370542 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
LMO4-201ENST00000370542 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
LMO4-201ENST00000370542 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
LMO4-201ENST00000370542 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
LMO4-201ENST00000370542 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
LMO4-201ENST00000370542 Q9BRP9 147 aa9.08□□□□□ -0.96
LMO4-201ENST00000370542 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
LMO4-201ENST00000370542 UBE2BP63146 152 aa9.07□□□□□ -0.96
LMO4-201ENST00000370542 IGLV8-61A0A075B6I0 122 aa9.06□□□□□ -0.96
LMO4-201ENST00000370542 UBE2AP49459 152 aa9.06□□□□□ -0.96
LMO4-201ENST00000370542 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
LMO4-201ENST00000370542 K7EQZ3 153 aa9.05□□□□□ -0.96
LMO4-201ENST00000370542 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
LMO4-201ENST00000370542 PSORS1C2Q9UIG4 136 aa9.01□□□□□ -0.97
LMO4-201ENST00000370542 MUC2Q02817 5179 aa9.01□□□□□ -0.97
LMO4-201ENST00000370542 CD164Q04900 197 aa8.99□□□□□ -0.97
LMO4-201ENST00000370542 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
LMO4-201ENST00000370542 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
LMO4-201ENST00000370542 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
LMO4-201ENST00000370542 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
LMO4-201ENST00000370542 H0Y9P7 68 aa8.96□□□□□ -0.98
LMO4-201ENST00000370542 PSPHP1O15172 72 aa8.96□□□□□ -0.98
LMO4-201ENST00000370542 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
LMO4-201ENST00000370542 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
LMO4-201ENST00000370542 LPAP08519 4548 aa8.94□□□□□ -0.98
LMO4-201ENST00000370542 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
LMO4-201ENST00000370542 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
LMO4-201ENST00000370542 A8MUN3 132 aa8.93□□□□□ -0.98
LMO4-201ENST00000370542 NDUFS5O43920 106 aa8.93□□□□□ -0.98
LMO4-201ENST00000370542 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
LMO4-201ENST00000370542 Q5VV11 94 aa8.93□□□□□ -0.98
LMO4-201ENST00000370542 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
LMO4-201ENST00000370542 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
LMO4-201ENST00000370542 Q75L30 129 aa8.92□□□□□ -0.98
LMO4-201ENST00000370542 Q8N9P0 234 aaPredicted RBP8.92□□□□□ -0.98
LMO4-201ENST00000370542 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
LMO4-201ENST00000370542 A8MWP4 228 aa8.91□□□□□ -0.98
LMO4-201ENST00000370542 SPRR1BP22528 89 aa8.91□□□□□ -0.98
LMO4-201ENST00000370542 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
LMO4-201ENST00000370542 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
LMO4-201ENST00000370542 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
LMO4-201ENST00000370542 A0A087WSZ3 146 aa8.88□□□□□ -0.99
LMO4-201ENST00000370542 H0Y9J4 135 aa8.88□□□□□ -0.99
LMO4-201ENST00000370542 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
LMO4-201ENST00000370542 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
LMO4-201ENST00000370542 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
LMO4-201ENST00000370542 PRR4Q16378 134 aa8.85□□□□□ -0.99
LMO4-201ENST00000370542 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
LMO4-201ENST00000370542 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
LMO4-201ENST00000370542 FSIP2Q5CZC0 6907 aa8.83□□□□□ -1
LMO4-201ENST00000370542 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
LMO4-201ENST00000370542 COA5Q86WW8 74 aa8.81□□□□□ -1
LMO4-201ENST00000370542 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
LMO4-201ENST00000370542 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
LMO4-201ENST00000370542 MOBPQ13875 183 aa8.8□□□□□ -1
LMO4-201ENST00000370542 LINC01558Q9Y6Z2 57 aa8.8□□□□□ -1
LMO4-201ENST00000370542 A6NED7 52 aa8.78□□□□□ -1
LMO4-201ENST00000370542 ZNF861PO60384 105 aa8.78□□□□□ -1
LMO4-201ENST00000370542 CRCT1Q9UGL9 99 aa8.77□□□□□ -1.01
LMO4-201ENST00000370542 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
LMO4-201ENST00000370542 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
LMO4-201ENST00000370542 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
LMO4-201ENST00000370542 PRLHP81277 87 aa8.72□□□□□ -1.01
LMO4-201ENST00000370542 A6NN06 94 aa8.71□□□□□ -1.02
LMO4-201ENST00000370542 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
LMO4-201ENST00000370542 LCA10Q71F78 164 aa8.69□□□□□ -1.02
LMO4-201ENST00000370542 SPTSSBQ8NFR3 76 aa8.69□□□□□ -1.02
LMO4-201ENST00000370542 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
LMO4-201ENST00000370542 A0A087X002 238 aa8.66□□□□□ -1.02
LMO4-201ENST00000370542 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
LMO4-201ENST00000370542 RBM12B-AS1Q9P1G2 102 aa8.65□□□□□ -1.02
LMO4-201ENST00000370542 A0A0G2JQZ4 141 aa8.63□□□□□ -1.03
LMO4-201ENST00000370542 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
LMO4-201ENST00000370542 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
LMO4-201ENST00000370542 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
LMO4-201ENST00000370542 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
LMO4-201ENST00000370542 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
LMO4-201ENST00000370542 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
LMO4-201ENST00000370542 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
LMO4-201ENST00000370542 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
LMO4-201ENST00000370542 A8MU10 97 aa8.56□□□□□ -1.04
LMO4-201ENST00000370542 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
LMO4-201ENST00000370542 Q96NJ1 140 aa8.56□□□□□ -1.04
LMO4-201ENST00000370542 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
LMO4-201ENST00000370542 HRES1P13985 223 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms