RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
BRCC3-204ENST00000369462 HERC1Q15751 4861 aa6.15□□□□□ -1.42
BRCC3-204ENST00000369462 J3KT08 172 aa6.14□□□□□ -1.43
BRCC3-204ENST00000369462 LINC00643Q86TS7 51 aa6.13□□□□□ -1.43
BRCC3-204ENST00000369462 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
BRCC3-204ENST00000369462 PRR4Q16378 134 aa6.13□□□□□ -1.43
BRCC3-204ENST00000369462 DSCR10P59022 87 aa6.12□□□□□ -1.43
BRCC3-204ENST00000369462 Q8N9L7 120 aa6.12□□□□□ -1.43
BRCC3-204ENST00000369462 A8MWP4 228 aa6.11□□□□□ -1.43
BRCC3-204ENST00000369462 CXCL6P80162 114 aa6.11□□□□□ -1.43
BRCC3-204ENST00000369462 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-204ENST00000369462 NDUFB1O75438 58 aa6.1□□□□□ -1.43
BRCC3-204ENST00000369462 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
BRCC3-204ENST00000369462 K7EQZ3 153 aa6.1□□□□□ -1.43
BRCC3-204ENST00000369462 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
BRCC3-204ENST00000369462 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
BRCC3-204ENST00000369462 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
BRCC3-204ENST00000369462 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
BRCC3-204ENST00000369462 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
BRCC3-204ENST00000369462 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
BRCC3-204ENST00000369462 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
BRCC3-204ENST00000369462 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
BRCC3-204ENST00000369462 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
BRCC3-204ENST00000369462 C5orf47Q569G3 176 aa6.04□□□□□ -1.44
BRCC3-204ENST00000369462 LINC00313P59037 77 aa6.04□□□□□ -1.44
BRCC3-204ENST00000369462 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
BRCC3-204ENST00000369462 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
BRCC3-204ENST00000369462 V9GYY9 64 aa6.02□□□□□ -1.45
BRCC3-204ENST00000369462 LPAP08519 4548 aa6.02□□□□□ -1.45
BRCC3-204ENST00000369462 A0A087WVE0 104 aa6.02□□□□□ -1.45
BRCC3-204ENST00000369462 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
BRCC3-204ENST00000369462 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
BRCC3-204ENST00000369462 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
BRCC3-204ENST00000369462 TPRXLQ17RH7 258 aa6□□□□□ -1.45
BRCC3-204ENST00000369462 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
BRCC3-204ENST00000369462 HMCN2Q8NDA2 5059 aa6□□□□□ -1.45
BRCC3-204ENST00000369462 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
BRCC3-204ENST00000369462 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
BRCC3-204ENST00000369462 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
BRCC3-204ENST00000369462 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
BRCC3-204ENST00000369462 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
BRCC3-204ENST00000369462 LRP2P98164 4655 aa5.96□□□□□ -1.45
BRCC3-204ENST00000369462 XP32Q5T750 250 aa5.95□□□□□ -1.46
BRCC3-204ENST00000369462 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
BRCC3-204ENST00000369462 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
BRCC3-204ENST00000369462 NDUFS5O43920 106 aa5.92□□□□□ -1.46
BRCC3-204ENST00000369462 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
BRCC3-204ENST00000369462 C20orf166-AS1Q96NR2 134 aa5.91□□□□□ -1.46
BRCC3-204ENST00000369462 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
BRCC3-204ENST00000369462 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
BRCC3-204ENST00000369462 A8MUU9 505 aa5.9□□□□□ -1.46
BRCC3-204ENST00000369462 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.47
BRCC3-204ENST00000369462 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.47
BRCC3-204ENST00000369462 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
BRCC3-204ENST00000369462 ATP11AUNQ6ZP68 121 aa5.84□□□□□ -1.47
BRCC3-204ENST00000369462 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
BRCC3-204ENST00000369462 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
BRCC3-204ENST00000369462 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
BRCC3-204ENST00000369462 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
BRCC3-204ENST00000369462 Q5W150 140 aa5.82□□□□□ -1.48
BRCC3-204ENST00000369462 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
BRCC3-204ENST00000369462 ATOX1O00244 68 aa5.8□□□□□ -1.48
BRCC3-204ENST00000369462 UQCRQO14949 82 aa5.79□□□□□ -1.48
BRCC3-204ENST00000369462 TRAV22A0A0B4J277 110 aa5.77□□□□□ -1.49
BRCC3-204ENST00000369462 SMIM20Q8N5G0 67 aa5.77□□□□□ -1.49
BRCC3-204ENST00000369462 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
BRCC3-204ENST00000369462 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
BRCC3-204ENST00000369462 MUC2Q02817 5179 aa5.76□□□□□ -1.49
BRCC3-204ENST00000369462 H0Y9P7 68 aa5.75□□□□□ -1.49
BRCC3-204ENST00000369462 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
BRCC3-204ENST00000369462 SERP2Q8N6R1 65 aa5.73□□□□□ -1.49
BRCC3-204ENST00000369462 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
BRCC3-204ENST00000369462 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
BRCC3-204ENST00000369462 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
BRCC3-204ENST00000369462 MP68P56378 58 aa5.72□□□□□ -1.49
BRCC3-204ENST00000369462 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
BRCC3-204ENST00000369462 SPINK7P58062 85 aa5.71□□□□□ -1.5
BRCC3-204ENST00000369462 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
BRCC3-204ENST00000369462 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
BRCC3-204ENST00000369462 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
BRCC3-204ENST00000369462 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
BRCC3-204ENST00000369462 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
BRCC3-204ENST00000369462 LOC101927531A0A1B0GV80 90 aa5.67□□□□□ -1.5
BRCC3-204ENST00000369462 COX7CP15954 63 aa5.67□□□□□ -1.5
BRCC3-204ENST00000369462 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
BRCC3-204ENST00000369462 H3BPC8 53 aa5.66□□□□□ -1.5
BRCC3-204ENST00000369462 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
BRCC3-204ENST00000369462 SNURFQ9Y675 71 aa5.65□□□□□ -1.51
BRCC3-204ENST00000369462 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
BRCC3-204ENST00000369462 HRES1P13985 223 aa5.61□□□□□ -1.51
BRCC3-204ENST00000369462 KLKP1Q107X0 134 aa5.6□□□□□ -1.51
BRCC3-204ENST00000369462 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
BRCC3-204ENST00000369462 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
BRCC3-204ENST00000369462 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
BRCC3-204ENST00000369462 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
BRCC3-204ENST00000369462 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
BRCC3-204ENST00000369462 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
BRCC3-204ENST00000369462 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
BRCC3-204ENST00000369462 H7BZZ5 65 aa5.5□□□□□ -1.53
BRCC3-204ENST00000369462 NDUFC1O43677 76 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms