RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 IGKV4-1P06312 121 aa8.2□□□□□ -1.1
HMGCS2-201ENST00000369406 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
HMGCS2-201ENST00000369406 Q5VSD8 79 aa8.19□□□□□ -1.1
HMGCS2-201ENST00000369406 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
HMGCS2-201ENST00000369406 BRK1Q8WUW1 75 aa8.18□□□□□ -1.1
HMGCS2-201ENST00000369406 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
HMGCS2-201ENST00000369406 K7EQZ3 153 aa8.17□□□□□ -1.1
HMGCS2-201ENST00000369406 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
HMGCS2-201ENST00000369406 C1orf195Q5TG92 126 aa8.14□□□□□ -1.11
HMGCS2-201ENST00000369406 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
HMGCS2-201ENST00000369406 SEC61GP60059 68 aa8.13□□□□□ -1.11
HMGCS2-201ENST00000369406 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
HMGCS2-201ENST00000369406 V9GYY9 64 aa8.13□□□□□ -1.11
HMGCS2-201ENST00000369406 BIRC6Q9NR09 4857 aa8.13□□□□□ -1.11
HMGCS2-201ENST00000369406 CD164Q04900 197 aa8.12□□□□□ -1.11
HMGCS2-201ENST00000369406 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
HMGCS2-201ENST00000369406 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
HMGCS2-201ENST00000369406 NDUFC1O43677 76 aa8.08□□□□□ -1.12
HMGCS2-201ENST00000369406 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
HMGCS2-201ENST00000369406 A8MWP4 228 aa8.07□□□□□ -1.12
HMGCS2-201ENST00000369406 Q8N1X5 172 aa8.06□□□□□ -1.12
HMGCS2-201ENST00000369406 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
HMGCS2-201ENST00000369406 HERC2O95714 4834 aa8.06□□□□□ -1.12
HMGCS2-201ENST00000369406 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
HMGCS2-201ENST00000369406 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
HMGCS2-201ENST00000369406 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
HMGCS2-201ENST00000369406 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
HMGCS2-201ENST00000369406 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
HMGCS2-201ENST00000369406 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
HMGCS2-201ENST00000369406 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
HMGCS2-201ENST00000369406 HCG22E2RYF7 251 aa8□□□□□ -1.13
HMGCS2-201ENST00000369406 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
HMGCS2-201ENST00000369406 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
HMGCS2-201ENST00000369406 SPINK1P00995 79 aa7.99□□□□□ -1.13
HMGCS2-201ENST00000369406 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
HMGCS2-201ENST00000369406 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
HMGCS2-201ENST00000369406 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
HMGCS2-201ENST00000369406 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
HMGCS2-201ENST00000369406 DMBT1Q9UGM3 2413 aaPredicted RBP7.96□□□□□ -1.14
HMGCS2-201ENST00000369406 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
HMGCS2-201ENST00000369406 C8orf17Q9NRJ1 99 aa7.95□□□□□ -1.14
HMGCS2-201ENST00000369406 NDUFB1O75438 58 aa7.94□□□□□ -1.14
HMGCS2-201ENST00000369406 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
HMGCS2-201ENST00000369406 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
HMGCS2-201ENST00000369406 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
HMGCS2-201ENST00000369406 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
HMGCS2-201ENST00000369406 RETNLBQ9BQ08 111 aa7.92□□□□□ -1.14
HMGCS2-201ENST00000369406 PMAIP1Q13794 54 aa7.91□□□□□ -1.14
HMGCS2-201ENST00000369406 hDV103S1A0JD37 113 aa7.9□□□□□ -1.14
HMGCS2-201ENST00000369406 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
HMGCS2-201ENST00000369406 Q1T7F1 81 aa7.83□□□□□ -1.16
HMGCS2-201ENST00000369406 LINC00313P59037 77 aa7.82□□□□□ -1.16
HMGCS2-201ENST00000369406 MRPL34Q9BQ48 92 aaKnown RBP7.82□□□□□ -1.16
HMGCS2-201ENST00000369406 PSPHP1O15172 72 aa7.82□□□□□ -1.16
HMGCS2-201ENST00000369406 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
HMGCS2-201ENST00000369406 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
HMGCS2-201ENST00000369406 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
HMGCS2-201ENST00000369406 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
HMGCS2-201ENST00000369406 NDUFS5O43920 106 aa7.78□□□□□ -1.16
HMGCS2-201ENST00000369406 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
HMGCS2-201ENST00000369406 Q5W150 140 aa7.76□□□□□ -1.17
HMGCS2-201ENST00000369406 Q8N9P0 234 aaPredicted RBP7.74□□□□□ -1.17
HMGCS2-201ENST00000369406 A8MU10 97 aa7.73□□□□□ -1.17
HMGCS2-201ENST00000369406 PRR4Q16378 134 aa7.73□□□□□ -1.17
HMGCS2-201ENST00000369406 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
HMGCS2-201ENST00000369406 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
HMGCS2-201ENST00000369406 LPAP08519 4548 aa7.72□□□□□ -1.17
HMGCS2-201ENST00000369406 H0Y9P7 68 aa7.72□□□□□ -1.17
HMGCS2-201ENST00000369406 A8MUN3 132 aa7.71□□□□□ -1.17
HMGCS2-201ENST00000369406 CYP4F30PQ9H0H9 118 aa7.69□□□□□ -1.18
HMGCS2-201ENST00000369406 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
HMGCS2-201ENST00000369406 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
HMGCS2-201ENST00000369406 Q5VV11 94 aa7.67□□□□□ -1.18
HMGCS2-201ENST00000369406 LRP2P98164 4655 aa7.66□□□□□ -1.18
HMGCS2-201ENST00000369406 HERC1Q15751 4861 aa7.65□□□□□ -1.18
HMGCS2-201ENST00000369406 MP68P56378 58 aa7.64□□□□□ -1.19
HMGCS2-201ENST00000369406 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
HMGCS2-201ENST00000369406 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
HMGCS2-201ENST00000369406 A8MUU9 505 aa7.62□□□□□ -1.19
HMGCS2-201ENST00000369406 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
HMGCS2-201ENST00000369406 RBM12B-AS1Q9P1G2 102 aa7.61□□□□□ -1.19
HMGCS2-201ENST00000369406 CHKB-CPT1BH3BT56 60 aa7.6□□□□□ -1.19
HMGCS2-201ENST00000369406 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
HMGCS2-201ENST00000369406 H3BPC8 53 aa7.57□□□□□ -1.2
HMGCS2-201ENST00000369406 J3QL48 77 aa7.57□□□□□ -1.2
HMGCS2-201ENST00000369406 XP32Q5T750 250 aa7.57□□□□□ -1.2
HMGCS2-201ENST00000369406 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
HMGCS2-201ENST00000369406 PRR15LQ9BU68 103 aa7.56□□□□□ -1.2
HMGCS2-201ENST00000369406 LCA10Q71F78 164 aa7.53□□□□□ -1.2
HMGCS2-201ENST00000369406 Q75L30 129 aa7.53□□□□□ -1.2
HMGCS2-201ENST00000369406 IGKV2-30P06310 120 aa7.52□□□□□ -1.2
HMGCS2-201ENST00000369406 LOC101927531A0A1B0GV80 90 aa7.51□□□□□ -1.21
HMGCS2-201ENST00000369406 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
HMGCS2-201ENST00000369406 ATP11AUNQ6ZP68 121 aa7.5□□□□□ -1.21
HMGCS2-201ENST00000369406 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
HMGCS2-201ENST00000369406 A6NN06 94 aa7.5□□□□□ -1.21
HMGCS2-201ENST00000369406 A6NED7 52 aa7.49□□□□□ -1.21
HMGCS2-201ENST00000369406 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
HMGCS2-201ENST00000369406 SPANXA2-OT1Q8N9U9 137 aa7.48□□□□□ -1.21
HMGCS2-201ENST00000369406 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms