RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 WFDC13Q8IUB5 93 aa15.28■□□□□ 0.04
EFNA3-201ENST00000368408 SPINK6Q6UWN8 80 aa15.27■□□□□ 0.04
EFNA3-201ENST00000368408 TMEM254Q8TBM7 123 aa15.27■□□□□ 0.04
EFNA3-201ENST00000368408 CASC2Q6XLA1 102 aa15.26■□□□□ 0.03
EFNA3-201ENST00000368408 MMP24-AS1A0A0U1RRL7 71 aa15.26■□□□□ 0.03
EFNA3-201ENST00000368408 APOBP04114 4563 aaKnown RBP15.23■□□□□ 0.03
EFNA3-201ENST00000368408 A0A0U1RQV1 116 aa15.22■□□□□ 0.03
EFNA3-201ENST00000368408 SNURFQ9Y675 71 aa15.22■□□□□ 0.03
EFNA3-201ENST00000368408 A0A1B0GVX0 72 aa15.21■□□□□ 0.02
EFNA3-201ENST00000368408 CDK2AP2O75956 126 aa15.18■□□□□ 0.02
EFNA3-201ENST00000368408 PLA2G1BP04054 148 aaKnown RBP15.17■□□□□ 0.02
EFNA3-201ENST00000368408 C8orf17Q9NRJ1 99 aa15.17■□□□□ 0.02
EFNA3-201ENST00000368408 hDV103S1A0JD37 113 aa15.15■□□□□ 0.02
EFNA3-201ENST00000368408 BIRC6Q9NR09 4857 aa15.14■□□□□ 0.01
EFNA3-201ENST00000368408 KRTAP10-4P60372 401 aaPredicted RBP15.13■□□□□ 0.01
EFNA3-201ENST00000368408 SMR3BP02814 79 aaPredicted RBP15.12■□□□□ 0.01
EFNA3-201ENST00000368408 PMAIP1Q13794 54 aa15.11■□□□□ 0.01
EFNA3-201ENST00000368408 IGHV6-1A0A0B4J1U7 121 aa15.1■□□□□ 0.01
EFNA3-201ENST00000368408 ZCCHC13Q8WW36 166 aaKnown RBP15.08■□□□□ 0.01
EFNA3-201ENST00000368408 TYMSOSQ8TAI1 123 aa15.07■□□□□ 0
EFNA3-201ENST00000368408 LIMD2Q9BT23 127 aa15.06■□□□□ 0
EFNA3-201ENST00000368408 TP53AIP1Q9HCN2 124 aa15.01□□□□□ -0.01
EFNA3-201ENST00000368408 FAT1Q14517 4588 aa15□□□□□ -0.01
EFNA3-201ENST00000368408 SPINK1P00995 79 aa15□□□□□ -0.01
EFNA3-201ENST00000368408 MP68P56378 58 aa15□□□□□ -0.01
EFNA3-201ENST00000368408 Q1T7F1 81 aa15□□□□□ -0.01
EFNA3-201ENST00000368408 C8orf87E5RJ46 101 aa14.99□□□□□ -0.01
EFNA3-201ENST00000368408 H3BPC8 53 aa14.99□□□□□ -0.01
EFNA3-201ENST00000368408 C4orf48Q5BLP8 95 aa14.99□□□□□ -0.01
EFNA3-201ENST00000368408 NOTCH2NLQ7Z3S9 236 aa14.99□□□□□ -0.01
EFNA3-201ENST00000368408 MRPL34Q9BQ48 92 aaKnown RBP14.99□□□□□ -0.01
EFNA3-201ENST00000368408 RPS29P62273 56 aaKnown RBP14.96□□□□□ -0.01
EFNA3-201ENST00000368408 PRR26Q8N8Z3 221 aa14.96□□□□□ -0.01
EFNA3-201ENST00000368408 KIAA1109Q2LD37 5005 aa14.95□□□□□ -0.02
EFNA3-201ENST00000368408 H0Y9P7 68 aa14.94□□□□□ -0.02
EFNA3-201ENST00000368408 MPLKIPQ8TAP9 179 aa14.94□□□□□ -0.02
EFNA3-201ENST00000368408 SPAG11AQ6PDA7 123 aa14.93□□□□□ -0.02
EFNA3-201ENST00000368408 PKHD1L1Q86WI1 4243 aa14.91□□□□□ -0.02
EFNA3-201ENST00000368408 LINC00304Q8N9R0 145 aa14.9□□□□□ -0.02
EFNA3-201ENST00000368408 TRAV22A0A0B4J277 110 aa14.9□□□□□ -0.02
EFNA3-201ENST00000368408 LINC00208Q96KT6 92 aa14.88□□□□□ -0.03
EFNA3-201ENST00000368408 LINC00313P59037 77 aa14.84□□□□□ -0.03
EFNA3-201ENST00000368408 NDUFS5O43920 106 aa14.82□□□□□ -0.04
EFNA3-201ENST00000368408 RYR1P21817 5038 aa14.81□□□□□ -0.04
EFNA3-201ENST00000368408 FAM229AH3BQW9 127 aa14.81□□□□□ -0.04
EFNA3-201ENST00000368408 HSPG2P98160 4391 aa14.8□□□□□ -0.04
EFNA3-201ENST00000368408 C1orf64Q8NEQ6 169 aa14.8□□□□□ -0.04
EFNA3-201ENST00000368408 HERC2O95714 4834 aa14.75□□□□□ -0.05
EFNA3-201ENST00000368408 Q8N9P0 234 aaPredicted RBP14.75□□□□□ -0.05
EFNA3-201ENST00000368408 CYP4F30PQ9H0H9 118 aa14.74□□□□□ -0.05
EFNA3-201ENST00000368408 KRTAP16-1A8MUX0 517 aa14.73□□□□□ -0.05
EFNA3-201ENST00000368408 KRTAP13-3Q3SY46 172 aa14.71□□□□□ -0.05
EFNA3-201ENST00000368408 KRTAP17-1Q9BYP8 105 aa14.69□□□□□ -0.06
EFNA3-201ENST00000368408 SPANXA2-OT1Q8N9U9 137 aa14.68□□□□□ -0.06
EFNA3-201ENST00000368408 Q5VSD8 79 aa14.67□□□□□ -0.06
EFNA3-201ENST00000368408 Q5W150 140 aa14.64□□□□□ -0.07
EFNA3-201ENST00000368408 LOC101927531A0A1B0GV80 90 aa14.59□□□□□ -0.07
EFNA3-201ENST00000368408 KTN1-AS1Q86SY8 53 aa14.59□□□□□ -0.07
EFNA3-201ENST00000368408 Q8N1X5 172 aa14.58□□□□□ -0.08
EFNA3-201ENST00000368408 KRTAP10-8P60410 259 aa14.55□□□□□ -0.08
EFNA3-201ENST00000368408 KRTAP4-5Q9BYR2 181 aa14.54□□□□□ -0.08
EFNA3-201ENST00000368408 IGLV7-46A0A075B6I9 117 aa14.52□□□□□ -0.09
EFNA3-201ENST00000368408 TNXBP22105 4242 aa14.49□□□□□ -0.09
EFNA3-201ENST00000368408 PCOTHQ58A44 107 aa14.47□□□□□ -0.09
EFNA3-201ENST00000368408 PRR4Q16378 134 aa14.47□□□□□ -0.09
EFNA3-201ENST00000368408 PSPHP1O15172 72 aa14.46□□□□□ -0.09
EFNA3-201ENST00000368408 Q5VV11 94 aa14.45□□□□□ -0.1
EFNA3-201ENST00000368408 ATP11AUNQ6ZP68 121 aa14.44□□□□□ -0.1
EFNA3-201ENST00000368408 RBM12B-AS1Q9P1G2 102 aa14.43□□□□□ -0.1
EFNA3-201ENST00000368408 ABCA13Q86UQ4 5058 aa14.41□□□□□ -0.1
EFNA3-201ENST00000368408 FLG2Q5D862 2391 aaPredicted RBP14.4□□□□□ -0.1
EFNA3-201ENST00000368408 FAT3Q8TDW7 4589 aa14.4□□□□□ -0.1
EFNA3-201ENST00000368408 A8MUN3 132 aa14.39□□□□□ -0.11
EFNA3-201ENST00000368408 IGKV2-30P06310 120 aa14.39□□□□□ -0.11
EFNA3-201ENST00000368408 LRP1Q07954 4544 aaKnown RBP14.39□□□□□ -0.11
EFNA3-201ENST00000368408 RETNLBQ9BQ08 111 aa14.35□□□□□ -0.11
EFNA3-201ENST00000368408 C20orf166-AS1Q96NR2 134 aa14.34□□□□□ -0.11
EFNA3-201ENST00000368408 PCLOQ9Y6V0 5065 aa14.33□□□□□ -0.12
EFNA3-201ENST00000368408 A8MUU9 505 aa14.32□□□□□ -0.12
EFNA3-201ENST00000368408 Q75L30 129 aa14.31□□□□□ -0.12
EFNA3-201ENST00000368408 A6NN06 94 aa14.29□□□□□ -0.12
EFNA3-201ENST00000368408 C9orf92A6NGG3 77 aa14.27□□□□□ -0.12
EFNA3-201ENST00000368408 CHKB-CPT1BH3BT56 60 aa14.25□□□□□ -0.13
EFNA3-201ENST00000368408 MT1HL1P0DM35 61 aa14.23□□□□□ -0.13
EFNA3-201ENST00000368408 HRES1P13985 223 aa14.23□□□□□ -0.13
EFNA3-201ENST00000368408 C7orf65Q6ZTY9 151 aa14.2□□□□□ -0.14
EFNA3-201ENST00000368408 COA5Q86WW8 74 aa14.19□□□□□ -0.14
EFNA3-201ENST00000368408 CDC42SE1Q9NRR8 79 aa14.19□□□□□ -0.14
EFNA3-201ENST00000368408 MYCBP2O75592 4640 aa14.17□□□□□ -0.14
EFNA3-201ENST00000368408 IGKV2D-30A0A075B6S6 120 aa14.17□□□□□ -0.14
EFNA3-201ENST00000368408 PRR15LQ9BU68 103 aa14.14□□□□□ -0.15
EFNA3-201ENST00000368408 A8MU10 97 aa14.13□□□□□ -0.15
EFNA3-201ENST00000368408 LCA10Q71F78 164 aa14.13□□□□□ -0.15
EFNA3-201ENST00000368408 DMAC1Q96GE9 116 aa14.12□□□□□ -0.15
EFNA3-201ENST00000368408 ACYP2P14621 99 aa14.06□□□□□ -0.16
EFNA3-201ENST00000368408 SPTSSBQ8NFR3 76 aa14.06□□□□□ -0.16
EFNA3-201ENST00000368408 A6NED7 52 aa14.04□□□□□ -0.16
EFNA3-201ENST00000368408 DMBT1Q9UGM3 2413 aaPredicted RBP14.03□□□□□ -0.16
EFNA3-201ENST00000368408 LINC01558Q9Y6Z2 57 aa13.99□□□□□ -0.17
EFNA3-201ENST00000368408 RPL37P61927 97 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms