RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PRO0628Q9UI54 55 aa10.68□□□□□ -0.7
UBQLN4-201ENST00000368309 DNAH5Q8TE73 4624 aa10.67□□□□□ -0.7
UBQLN4-201ENST00000368309 TP53AIP1Q9HCN2 124 aa10.67□□□□□ -0.7
UBQLN4-201ENST00000368309 ALMS1Q8TCU4 4167 aa10.66□□□□□ -0.7
UBQLN4-201ENST00000368309 PSPHP1O15172 72 aa10.66□□□□□ -0.7
UBQLN4-201ENST00000368309 Q1T7F1 81 aa10.65□□□□□ -0.7
UBQLN4-201ENST00000368309 MRPL34Q9BQ48 92 aaKnown RBP10.65□□□□□ -0.7
UBQLN4-201ENST00000368309 CD164Q04900 197 aa10.61□□□□□ -0.71
UBQLN4-201ENST00000368309 LRP1BQ9NZR2 4599 aa10.59□□□□□ -0.71
UBQLN4-201ENST00000368309 IGLV7-46A0A075B6I9 117 aa10.59□□□□□ -0.71
UBQLN4-201ENST00000368309 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
UBQLN4-201ENST00000368309 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
UBQLN4-201ENST00000368309 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
UBQLN4-201ENST00000368309 A8MUN3 132 aa10.55□□□□□ -0.72
UBQLN4-201ENST00000368309 COA5Q86WW8 74 aa10.54□□□□□ -0.72
UBQLN4-201ENST00000368309 Q5W150 140 aa10.54□□□□□ -0.72
UBQLN4-201ENST00000368309 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
UBQLN4-201ENST00000368309 Q8N9P0 234 aaPredicted RBP10.5□□□□□ -0.73
UBQLN4-201ENST00000368309 PKD1P98161 4303 aa10.5□□□□□ -0.73
UBQLN4-201ENST00000368309 FAT2Q9NYQ8 4349 aa10.48□□□□□ -0.73
UBQLN4-201ENST00000368309 Q6ZSA8 131 aa10.47□□□□□ -0.73
UBQLN4-201ENST00000368309 V9GYY9 64 aa10.47□□□□□ -0.73
UBQLN4-201ENST00000368309 Q5VV11 94 aa10.44□□□□□ -0.74
UBQLN4-201ENST00000368309 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
UBQLN4-201ENST00000368309 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
UBQLN4-201ENST00000368309 C1orf195Q5TG92 126 aa10.42□□□□□ -0.74
UBQLN4-201ENST00000368309 LINC00313P59037 77 aa10.42□□□□□ -0.74
UBQLN4-201ENST00000368309 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
UBQLN4-201ENST00000368309 KRTAP13-3Q3SY46 172 aa10.41□□□□□ -0.74
UBQLN4-201ENST00000368309 LIMD2Q9BT23 127 aa10.41□□□□□ -0.74
UBQLN4-201ENST00000368309 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.74
UBQLN4-201ENST00000368309 C8orf87E5RJ46 101 aa10.4□□□□□ -0.75
UBQLN4-201ENST00000368309 HRES1P13985 223 aa10.4□□□□□ -0.75
UBQLN4-201ENST00000368309 KRTAP1-4P0C5Y4 121 aa10.38□□□□□ -0.75
UBQLN4-201ENST00000368309 SPAG11AQ6PDA7 123 aa10.38□□□□□ -0.75
UBQLN4-201ENST00000368309 A8MU10 97 aa10.37□□□□□ -0.75
UBQLN4-201ENST00000368309 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
UBQLN4-201ENST00000368309 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
UBQLN4-201ENST00000368309 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
UBQLN4-201ENST00000368309 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
UBQLN4-201ENST00000368309 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
UBQLN4-201ENST00000368309 TYMSOSQ8TAI1 123 aa10.27□□□□□ -0.76
UBQLN4-201ENST00000368309 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
UBQLN4-201ENST00000368309 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
UBQLN4-201ENST00000368309 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
UBQLN4-201ENST00000368309 A6NED7 52 aa10.24□□□□□ -0.77
UBQLN4-201ENST00000368309 Q75L30 129 aa10.24□□□□□ -0.77
UBQLN4-201ENST00000368309 ACYP2P14621 99 aa10.21□□□□□ -0.77
UBQLN4-201ENST00000368309 SMR3BP02814 79 aaPredicted RBP10.2□□□□□ -0.78
UBQLN4-201ENST00000368309 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
UBQLN4-201ENST00000368309 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
UBQLN4-201ENST00000368309 LCA10Q71F78 164 aa10.19□□□□□ -0.78
UBQLN4-201ENST00000368309 IGKV2D-30A0A075B6S6 120 aa10.18□□□□□ -0.78
UBQLN4-201ENST00000368309 SPINK1P00995 79 aa10.17□□□□□ -0.78
UBQLN4-201ENST00000368309 DMAC1Q96GE9 116 aa10.15□□□□□ -0.78
UBQLN4-201ENST00000368309 SPTSSBQ8NFR3 76 aa10.14□□□□□ -0.79
UBQLN4-201ENST00000368309 DYNC1H1Q14204 4646 aaKnown RBP10.12□□□□□ -0.79
UBQLN4-201ENST00000368309 SPINK7P58062 85 aa10.11□□□□□ -0.79
UBQLN4-201ENST00000368309 FAT1Q14517 4588 aa10.11□□□□□ -0.79
UBQLN4-201ENST00000368309 PMAIP1Q13794 54 aa10.11□□□□□ -0.79
UBQLN4-201ENST00000368309 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
UBQLN4-201ENST00000368309 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
UBQLN4-201ENST00000368309 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
UBQLN4-201ENST00000368309 ATP11AUNQ6ZP68 121 aa10.01□□□□□ -0.81
UBQLN4-201ENST00000368309 C7orf65Q6ZTY9 151 aa10.01□□□□□ -0.81
UBQLN4-201ENST00000368309 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
UBQLN4-201ENST00000368309 APOBP04114 4563 aaKnown RBP9.96□□□□□ -0.82
UBQLN4-201ENST00000368309 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
UBQLN4-201ENST00000368309 RPS29P62273 56 aaKnown RBP9.94□□□□□ -0.82
UBQLN4-201ENST00000368309 A0A1B0GU69 56 aa9.94□□□□□ -0.82
UBQLN4-201ENST00000368309 Q8N1X5 172 aa9.94□□□□□ -0.82
UBQLN4-201ENST00000368309 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
UBQLN4-201ENST00000368309 A6NN06 94 aa9.86□□□□□ -0.83
UBQLN4-201ENST00000368309 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
UBQLN4-201ENST00000368309 RYR2Q92736 4967 aa9.84□□□□□ -0.83
UBQLN4-201ENST00000368309 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
UBQLN4-201ENST00000368309 A8MUU9 505 aa9.8□□□□□ -0.84
UBQLN4-201ENST00000368309 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
UBQLN4-201ENST00000368309 KTN1-AS1Q86SY8 53 aa9.79□□□□□ -0.84
UBQLN4-201ENST00000368309 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
UBQLN4-201ENST00000368309 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
UBQLN4-201ENST00000368309 UQCR11O14957 56 aa9.73□□□□□ -0.85
UBQLN4-201ENST00000368309 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.85
UBQLN4-201ENST00000368309 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.85
UBQLN4-201ENST00000368309 KRTAP3-1Q9BYR8 98 aa9.69□□□□□ -0.86
UBQLN4-201ENST00000368309 SEC61GP60059 68 aa9.68□□□□□ -0.86
UBQLN4-201ENST00000368309 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
UBQLN4-201ENST00000368309 FAT3Q8TDW7 4589 aa9.6□□□□□ -0.87
UBQLN4-201ENST00000368309 TNXBP22105 4242 aa9.59□□□□□ -0.88
UBQLN4-201ENST00000368309 Q5VSD8 79 aa9.56□□□□□ -0.88
UBQLN4-201ENST00000368309 HSPG2P98160 4391 aa9.56□□□□□ -0.88
UBQLN4-201ENST00000368309 RBM12B-AS1Q9P1G2 102 aa9.56□□□□□ -0.88
UBQLN4-201ENST00000368309 MYCBP2O75592 4640 aa9.55□□□□□ -0.88
UBQLN4-201ENST00000368309 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
UBQLN4-201ENST00000368309 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.89
UBQLN4-201ENST00000368309 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
UBQLN4-201ENST00000368309 RYR3Q15413 4870 aa9.51□□□□□ -0.89
UBQLN4-201ENST00000368309 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
UBQLN4-201ENST00000368309 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
UBQLN4-201ENST00000368309 H0YAA0 97 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms