RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 LIMD2Q9BT23 127 aa10.56□□□□□ -0.72
LMNA-204ENST00000368298 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
LMNA-204ENST00000368298 BPY2O14599 106 aa10.54□□□□□ -0.72
LMNA-204ENST00000368298 A0A087WSZ3 146 aa10.51□□□□□ -0.73
LMNA-204ENST00000368298 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
LMNA-204ENST00000368298 ATOX1O00244 68 aa10.49□□□□□ -0.73
LMNA-204ENST00000368298 IGKV4-1P06312 121 aa10.46□□□□□ -0.74
LMNA-204ENST00000368298 Q8N9L7 120 aa10.46□□□□□ -0.74
LMNA-204ENST00000368298 ASB16-AS1Q495Z4 193 aa10.43□□□□□ -0.74
LMNA-204ENST00000368298 KRTAP13-3Q3SY46 172 aa10.42□□□□□ -0.74
LMNA-204ENST00000368298 RNF213Q63HN8 5207 aa10.42□□□□□ -0.74
LMNA-204ENST00000368298 C1orf195Q5TG92 126 aa10.42□□□□□ -0.74
LMNA-204ENST00000368298 DSCR10P59022 87 aa10.41□□□□□ -0.74
LMNA-204ENST00000368298 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
LMNA-204ENST00000368298 CCDC179H3BU77 68 aa10.38□□□□□ -0.75
LMNA-204ENST00000368298 LINC00472Q9H8W2 130 aa10.36□□□□□ -0.75
LMNA-204ENST00000368298 K7EQZ3 153 aa10.36□□□□□ -0.75
LMNA-204ENST00000368298 COX7CP15954 63 aa10.35□□□□□ -0.75
LMNA-204ENST00000368298 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
LMNA-204ENST00000368298 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
LMNA-204ENST00000368298 UQCRQO14949 82 aa10.33□□□□□ -0.76
LMNA-204ENST00000368298 J3KT08 172 aa10.3□□□□□ -0.76
LMNA-204ENST00000368298 SMIM20Q8N5G0 67 aa10.3□□□□□ -0.76
LMNA-204ENST00000368298 Q96NJ1 140 aa10.3□□□□□ -0.76
LMNA-204ENST00000368298 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
LMNA-204ENST00000368298 A8MWP4 228 aa10.27□□□□□ -0.77
LMNA-204ENST00000368298 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
LMNA-204ENST00000368298 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
LMNA-204ENST00000368298 XP32Q5T750 250 aa10.24□□□□□ -0.77
LMNA-204ENST00000368298 NDUFB1O75438 58 aa10.21□□□□□ -0.78
LMNA-204ENST00000368298 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
LMNA-204ENST00000368298 WFDC13Q8IUB5 93 aa10.19□□□□□ -0.78
LMNA-204ENST00000368298 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
LMNA-204ENST00000368298 CASC2Q6XLA1 102 aa10.15□□□□□ -0.78
LMNA-204ENST00000368298 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
LMNA-204ENST00000368298 SEC61BP60468 96 aaKnown RBP10.14□□□□□ -0.79
LMNA-204ENST00000368298 A0A1B0GVX0 72 aa10.13□□□□□ -0.79
LMNA-204ENST00000368298 C20orf197Q8N268 126 aa10.13□□□□□ -0.79
LMNA-204ENST00000368298 MUC17Q685J3 4493 aa10.11□□□□□ -0.79
LMNA-204ENST00000368298 MUC2Q02817 5179 aa10.11□□□□□ -0.79
LMNA-204ENST00000368298 IGHV6-1A0A0B4J1U7 121 aa10.1□□□□□ -0.79
LMNA-204ENST00000368298 C8orf17Q9NRJ1 99 aa10.1□□□□□ -0.79
LMNA-204ENST00000368298 CYSTM1Q9H1C7 97 aa10.1□□□□□ -0.79
LMNA-204ENST00000368298 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
LMNA-204ENST00000368298 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
LMNA-204ENST00000368298 RPL37P61927 97 aaKnown RBP10.04□□□□□ -0.8
LMNA-204ENST00000368298 KLKP1Q107X0 134 aa10.04□□□□□ -0.8
LMNA-204ENST00000368298 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
LMNA-204ENST00000368298 A0A0U1RQV1 116 aa10.01□□□□□ -0.81
LMNA-204ENST00000368298 NOTCH2NLQ7Z3S9 236 aa10.01□□□□□ -0.81
LMNA-204ENST00000368298 Q75L30 129 aa10□□□□□ -0.81
LMNA-204ENST00000368298 C8orf87E5RJ46 101 aa9.99□□□□□ -0.81
LMNA-204ENST00000368298 C5orf47Q569G3 176 aa9.99□□□□□ -0.81
LMNA-204ENST00000368298 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
LMNA-204ENST00000368298 LINC00313P59037 77 aa9.98□□□□□ -0.81
LMNA-204ENST00000368298 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
LMNA-204ENST00000368298 C20orf166-AS1Q96NR2 134 aa9.98□□□□□ -0.81
LMNA-204ENST00000368298 MRPL34Q9BQ48 92 aaKnown RBP9.98□□□□□ -0.81
LMNA-204ENST00000368298 TMEM258P61165 79 aa9.97□□□□□ -0.81
LMNA-204ENST00000368298 A8MUU9 505 aa9.94□□□□□ -0.82
LMNA-204ENST00000368298 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
LMNA-204ENST00000368298 H7BZZ5 65 aa9.94□□□□□ -0.82
LMNA-204ENST00000368298 NDUFC1O43677 76 aa9.94□□□□□ -0.82
LMNA-204ENST00000368298 H0Y9P7 68 aa9.92□□□□□ -0.82
LMNA-204ENST00000368298 NDUFS5O43920 106 aa9.92□□□□□ -0.82
LMNA-204ENST00000368298 MP68P56378 58 aa9.92□□□□□ -0.82
LMNA-204ENST00000368298 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
LMNA-204ENST00000368298 ZCCHC13Q8WW36 166 aaKnown RBP9.9□□□□□ -0.83
LMNA-204ENST00000368298 ATP11AUNQ6ZP68 121 aa9.89□□□□□ -0.83
LMNA-204ENST00000368298 TRAV22A0A0B4J277 110 aa9.87□□□□□ -0.83
LMNA-204ENST00000368298 H3BPC8 53 aa9.87□□□□□ -0.83
LMNA-204ENST00000368298 LINC00208Q96KT6 92 aa9.86□□□□□ -0.83
LMNA-204ENST00000368298 FAM236DA0A1B0GTK5 79 aa9.85□□□□□ -0.83
LMNA-204ENST00000368298 FAM236CP0DP71 79 aa9.85□□□□□ -0.83
LMNA-204ENST00000368298 FAT4Q6V0I7 4981 aa9.84□□□□□ -0.83
LMNA-204ENST00000368298 C1orf64Q8NEQ6 169 aa9.8□□□□□ -0.84
LMNA-204ENST00000368298 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
LMNA-204ENST00000368298 Q8N9P0 234 aaPredicted RBP9.79□□□□□ -0.84
LMNA-204ENST00000368298 ATP5EP56381 51 aaPredicted RBP9.78□□□□□ -0.84
LMNA-204ENST00000368298 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
LMNA-204ENST00000368298 Q5W150 140 aa9.73□□□□□ -0.85
LMNA-204ENST00000368298 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
LMNA-204ENST00000368298 RPS28P62857 69 aaKnown RBP9.68□□□□□ -0.86
LMNA-204ENST00000368298 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
LMNA-204ENST00000368298 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
LMNA-204ENST00000368298 SPANXA2-OT1Q8N9U9 137 aa9.63□□□□□ -0.87
LMNA-204ENST00000368298 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
LMNA-204ENST00000368298 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
LMNA-204ENST00000368298 MT1HP80294 61 aa9.53□□□□□ -0.88
LMNA-204ENST00000368298 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
LMNA-204ENST00000368298 KRTAP9-2Q9BYQ4 174 aa9.53□□□□□ -0.88
LMNA-204ENST00000368298 HRES1P13985 223 aa9.52□□□□□ -0.89
LMNA-204ENST00000368298 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
LMNA-204ENST00000368298 SPINK7P58062 85 aa9.51□□□□□ -0.89
LMNA-204ENST00000368298 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
LMNA-204ENST00000368298 C7orf65Q6ZTY9 151 aa9.43□□□□□ -0.9
LMNA-204ENST00000368298 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
LMNA-204ENST00000368298 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
LMNA-204ENST00000368298 COA5Q86WW8 74 aa9.38□□□□□ -0.91
LMNA-204ENST00000368298 FLGP20930 4061 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms