RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
LMNA-203ENST00000368297 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
LMNA-203ENST00000368297 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
LMNA-203ENST00000368297 Q96NJ1 140 aa9.13□□□□□ -0.95
LMNA-203ENST00000368297 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
LMNA-203ENST00000368297 RPS28P62857 69 aaKnown RBP9.12□□□□□ -0.95
LMNA-203ENST00000368297 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
LMNA-203ENST00000368297 Q5XG85 94 aa9.11□□□□□ -0.95
LMNA-203ENST00000368297 FAT3Q8TDW7 4589 aa9.11□□□□□ -0.95
LMNA-203ENST00000368297 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
LMNA-203ENST00000368297 SVIPQ8NHG7 77 aa9.1□□□□□ -0.95
LMNA-203ENST00000368297 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
LMNA-203ENST00000368297 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
LMNA-203ENST00000368297 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
LMNA-203ENST00000368297 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
LMNA-203ENST00000368297 OCR1Q9BZK8 76 aa9.07□□□□□ -0.96
LMNA-203ENST00000368297 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
LMNA-203ENST00000368297 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
LMNA-203ENST00000368297 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
LMNA-203ENST00000368297 J3QL48 77 aa9.04□□□□□ -0.96
LMNA-203ENST00000368297 C20orf197Q8N268 126 aa9.04□□□□□ -0.96
LMNA-203ENST00000368297 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
LMNA-203ENST00000368297 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
LMNA-203ENST00000368297 TNXBP22105 4242 aa9.02□□□□□ -0.97
LMNA-203ENST00000368297 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
LMNA-203ENST00000368297 MMP24-AS1A0A0U1RRL7 71 aa9.01□□□□□ -0.97
LMNA-203ENST00000368297 hDV103S1A0JD37 113 aa9□□□□□ -0.97
LMNA-203ENST00000368297 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
LMNA-203ENST00000368297 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
LMNA-203ENST00000368297 H7BZZ5 65 aa8.97□□□□□ -0.97
LMNA-203ENST00000368297 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
LMNA-203ENST00000368297 TMEM254Q8TBM7 123 aa8.97□□□□□ -0.97
LMNA-203ENST00000368297 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
LMNA-203ENST00000368297 NDUFC1O43677 76 aa8.96□□□□□ -0.98
LMNA-203ENST00000368297 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
LMNA-203ENST00000368297 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
LMNA-203ENST00000368297 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
LMNA-203ENST00000368297 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
LMNA-203ENST00000368297 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
LMNA-203ENST00000368297 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
LMNA-203ENST00000368297 MP68P56378 58 aa8.91□□□□□ -0.98
LMNA-203ENST00000368297 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
LMNA-203ENST00000368297 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
LMNA-203ENST00000368297 LINC00313P59037 77 aa8.88□□□□□ -0.99
LMNA-203ENST00000368297 SERP1Q9Y6X1 66 aa8.88□□□□□ -0.99
LMNA-203ENST00000368297 NDUFS5O43920 106 aa8.87□□□□□ -0.99
LMNA-203ENST00000368297 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
LMNA-203ENST00000368297 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
LMNA-203ENST00000368297 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
LMNA-203ENST00000368297 H3BPC8 53 aa8.86□□□□□ -0.99
LMNA-203ENST00000368297 PRR4Q16378 134 aa8.85□□□□□ -0.99
LMNA-203ENST00000368297 H0Y9P7 68 aa8.84□□□□□ -0.99
LMNA-203ENST00000368297 IGLV7-46A0A075B6I9 117 aa8.83□□□□□ -1
LMNA-203ENST00000368297 TRAV22A0A0B4J277 110 aa8.82□□□□□ -1
LMNA-203ENST00000368297 C9orf92A6NGG3 77 aa8.81□□□□□ -1
LMNA-203ENST00000368297 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
LMNA-203ENST00000368297 LINC00208Q96KT6 92 aa8.8□□□□□ -1
LMNA-203ENST00000368297 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
LMNA-203ENST00000368297 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
LMNA-203ENST00000368297 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
LMNA-203ENST00000368297 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
LMNA-203ENST00000368297 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
LMNA-203ENST00000368297 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
LMNA-203ENST00000368297 TPRXLQ17RH7 258 aa8.67□□□□□ -1.02
LMNA-203ENST00000368297 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
LMNA-203ENST00000368297 Q5W150 140 aa8.65□□□□□ -1.03
LMNA-203ENST00000368297 XP32Q5T750 250 aa8.62□□□□□ -1.03
LMNA-203ENST00000368297 SPANXA2-OT1Q8N9U9 137 aa8.62□□□□□ -1.03
LMNA-203ENST00000368297 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
LMNA-203ENST00000368297 A8MUU9 505 aa8.61□□□□□ -1.03
LMNA-203ENST00000368297 Q75L30 129 aa8.59□□□□□ -1.03
LMNA-203ENST00000368297 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
LMNA-203ENST00000368297 CYP4F30PQ9H0H9 118 aa8.57□□□□□ -1.04
LMNA-203ENST00000368297 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
LMNA-203ENST00000368297 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
LMNA-203ENST00000368297 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.05
LMNA-203ENST00000368297 HERC1Q15751 4861 aa8.51□□□□□ -1.05
LMNA-203ENST00000368297 LPAP08519 4548 aa8.47□□□□□ -1.05
LMNA-203ENST00000368297 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
LMNA-203ENST00000368297 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
LMNA-203ENST00000368297 Q1T7F1 81 aa8.43□□□□□ -1.06
LMNA-203ENST00000368297 PRO0628Q9UI54 55 aa8.43□□□□□ -1.06
LMNA-203ENST00000368297 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
LMNA-203ENST00000368297 HRES1P13985 223 aa8.42□□□□□ -1.06
LMNA-203ENST00000368297 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
LMNA-203ENST00000368297 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
LMNA-203ENST00000368297 LRP2P98164 4655 aa8.36□□□□□ -1.07
LMNA-203ENST00000368297 V9GYY9 64 aa8.36□□□□□ -1.07
LMNA-203ENST00000368297 ACYP2P14621 99 aa8.35□□□□□ -1.07
LMNA-203ENST00000368297 COA5Q86WW8 74 aa8.34□□□□□ -1.07
LMNA-203ENST00000368297 SPINK7P58062 85 aa8.33□□□□□ -1.08
LMNA-203ENST00000368297 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
LMNA-203ENST00000368297 BRK1Q8WUW1 75 aa8.3□□□□□ -1.08
LMNA-203ENST00000368297 A8MUN3 132 aa8.24□□□□□ -1.09
LMNA-203ENST00000368297 MUC17Q685J3 4493 aa8.24□□□□□ -1.09
LMNA-203ENST00000368297 CHKB-CPT1BH3BT56 60 aa8.23□□□□□ -1.09
LMNA-203ENST00000368297 PSPHP1O15172 72 aa8.21□□□□□ -1.1
LMNA-203ENST00000368297 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
LMNA-203ENST00000368297 Q5VV11 94 aa8.17□□□□□ -1.1
LMNA-203ENST00000368297 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms