RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
CD48-201ENST00000368045 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
CD48-201ENST00000368045 A0A087X002 238 aa8.4□□□□□ -1.07
CD48-201ENST00000368045 Q5VV11 94 aa8.4□□□□□ -1.07
CD48-201ENST00000368045 NOTCH2NLQ7Z3S9 236 aa8.4□□□□□ -1.07
CD48-201ENST00000368045 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
CD48-201ENST00000368045 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
CD48-201ENST00000368045 LY6G6CO95867 125 aa8.36□□□□□ -1.07
CD48-201ENST00000368045 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
CD48-201ENST00000368045 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
CD48-201ENST00000368045 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
CD48-201ENST00000368045 PRR15LQ9BU68 103 aa8.35□□□□□ -1.07
CD48-201ENST00000368045 Q75L30 129 aa8.33□□□□□ -1.08
CD48-201ENST00000368045 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
CD48-201ENST00000368045 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
CD48-201ENST00000368045 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
CD48-201ENST00000368045 HRES1P13985 223 aa8.3□□□□□ -1.08
CD48-201ENST00000368045 Q6ZSA8 131 aa8.3□□□□□ -1.08
CD48-201ENST00000368045 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
CD48-201ENST00000368045 Q5W150 140 aa8.3□□□□□ -1.08
CD48-201ENST00000368045 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
CD48-201ENST00000368045 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
CD48-201ENST00000368045 FRAS1Q86XX4 4008 aa8.28□□□□□ -1.08
CD48-201ENST00000368045 LINC00313P59037 77 aa8.27□□□□□ -1.08
CD48-201ENST00000368045 MEGF8Q7Z7M0 2845 aa8.27□□□□□ -1.09
CD48-201ENST00000368045 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
CD48-201ENST00000368045 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
CD48-201ENST00000368045 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
CD48-201ENST00000368045 ALMS1Q8TCU4 4167 aa8.23□□□□□ -1.09
CD48-201ENST00000368045 KRTAP10-1P60331 282 aa8.22□□□□□ -1.09
CD48-201ENST00000368045 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
CD48-201ENST00000368045 DNAH11Q96DT5 4516 aa8.22□□□□□ -1.09
CD48-201ENST00000368045 ACYP2P14621 99 aa8.22□□□□□ -1.09
CD48-201ENST00000368045 TGP01266 2768 aa8.21□□□□□ -1.09
CD48-201ENST00000368045 DNAH5Q8TE73 4624 aa8.21□□□□□ -1.1
CD48-201ENST00000368045 A6NED7 52 aa8.2□□□□□ -1.1
CD48-201ENST00000368045 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
CD48-201ENST00000368045 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
CD48-201ENST00000368045 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
CD48-201ENST00000368045 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
CD48-201ENST00000368045 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
CD48-201ENST00000368045 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
CD48-201ENST00000368045 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
CD48-201ENST00000368045 LCA10Q71F78 164 aa8.16□□□□□ -1.1
CD48-201ENST00000368045 A8MU10 97 aa8.15□□□□□ -1.11
CD48-201ENST00000368045 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
CD48-201ENST00000368045 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
CD48-201ENST00000368045 SPINK1P00995 79 aa8.1□□□□□ -1.11
CD48-201ENST00000368045 DNHD1Q96M86 4753 aa8.09□□□□□ -1.11
CD48-201ENST00000368045 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CD48-201ENST00000368045 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
CD48-201ENST00000368045 LRP1BQ9NZR2 4599 aa8.07□□□□□ -1.12
CD48-201ENST00000368045 PKD1P98161 4303 aa8.07□□□□□ -1.12
CD48-201ENST00000368045 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
CD48-201ENST00000368045 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
CD48-201ENST00000368045 SPINK7P58062 85 aa8.06□□□□□ -1.12
CD48-201ENST00000368045 RPS29P62273 56 aaKnown RBP8.05□□□□□ -1.12
CD48-201ENST00000368045 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
CD48-201ENST00000368045 A6NN06 94 aa8.01□□□□□ -1.13
CD48-201ENST00000368045 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
CD48-201ENST00000368045 KTN1-AS1Q86SY8 53 aa7.99□□□□□ -1.13
CD48-201ENST00000368045 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
CD48-201ENST00000368045 A0A1B0GU69 56 aa7.97□□□□□ -1.13
CD48-201ENST00000368045 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.14
CD48-201ENST00000368045 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
CD48-201ENST00000368045 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
CD48-201ENST00000368045 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
CD48-201ENST00000368045 SEC61GP60059 68 aa7.92□□□□□ -1.14
CD48-201ENST00000368045 SACSQ9NZJ4 4579 aa7.91□□□□□ -1.14
CD48-201ENST00000368045 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
CD48-201ENST00000368045 UQCR11O14957 56 aa7.85□□□□□ -1.15
CD48-201ENST00000368045 A8MUU9 505 aa7.84□□□□□ -1.15
CD48-201ENST00000368045 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
CD48-201ENST00000368045 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
CD48-201ENST00000368045 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
CD48-201ENST00000368045 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
CD48-201ENST00000368045 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
CD48-201ENST00000368045 Q8N1X5 172 aa7.79□□□□□ -1.16
CD48-201ENST00000368045 DYNC1H1Q14204 4646 aaKnown RBP7.76□□□□□ -1.17
CD48-201ENST00000368045 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
CD48-201ENST00000368045 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
CD48-201ENST00000368045 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
CD48-201ENST00000368045 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
CD48-201ENST00000368045 APOBP04114 4563 aaKnown RBP7.7□□□□□ -1.18
CD48-201ENST00000368045 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
CD48-201ENST00000368045 FAT1Q14517 4588 aa7.6□□□□□ -1.19
CD48-201ENST00000368045 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.2
CD48-201ENST00000368045 A0A1B0GU33 70 aa7.54□□□□□ -1.2
CD48-201ENST00000368045 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
CD48-201ENST00000368045 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
CD48-201ENST00000368045 RYR2Q92736 4967 aa7.52□□□□□ -1.21
CD48-201ENST00000368045 H0YAA0 97 aa7.52□□□□□ -1.21
CD48-201ENST00000368045 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
CD48-201ENST00000368045 ADM2Q7Z4H4 148 aa7.51□□□□□ -1.21
CD48-201ENST00000368045 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
CD48-201ENST00000368045 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
CD48-201ENST00000368045 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
CD48-201ENST00000368045 Q5VSD8 79 aa7.43□□□□□ -1.22
CD48-201ENST00000368045 TNXBP22105 4242 aa7.41□□□□□ -1.22
CD48-201ENST00000368045 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms