RNA–Protein interactions for RNA: ENST00000367218.7

ATP2B4-204, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 8,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-204ENST00000367218 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
ATP2B4-204ENST00000367218 ADGRG4Q8IZF6 3080 aa4.36□□□□□ -1.71
ATP2B4-204ENST00000367218 NIPBLQ6KC79 2804 aaeCLIP4.36□□□□□ -1.71
ATP2B4-204ENST00000367218 A8MU10 97 aa4.36□□□□□ -1.71
ATP2B4-204ENST00000367218 PDZD2O15018 2839 aa4.35□□□□□ -1.71
ATP2B4-204ENST00000367218 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
ATP2B4-204ENST00000367218 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
ATP2B4-204ENST00000367218 SRRM2Q9UQ35 2752 aaKnown RBP4.35□□□□□ -1.71
ATP2B4-204ENST00000367218 FLNCQ14315 2725 aa4.34□□□□□ -1.71
ATP2B4-204ENST00000367218 TENM1Q9UKZ4 2725 aa4.34□□□□□ -1.71
ATP2B4-204ENST00000367218 SZT2Q5T011 3432 aa4.33□□□□□ -1.72
ATP2B4-204ENST00000367218 PLAC4Q8WY50 150 aa4.33□□□□□ -1.72
ATP2B4-204ENST00000367218 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
ATP2B4-204ENST00000367218 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
ATP2B4-204ENST00000367218 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
ATP2B4-204ENST00000367218 SPTBN5Q9NRC6 3674 aaKnown RBP4.31□□□□□ -1.72
ATP2B4-204ENST00000367218 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
ATP2B4-204ENST00000367218 ASPMQ8IZT6 3477 aa4.31□□□□□ -1.72
ATP2B4-204ENST00000367218 MYO15AQ9UKN7 3530 aa4.31□□□□□ -1.72
ATP2B4-204ENST00000367218 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
ATP2B4-204ENST00000367218 SPEGQ15772 3267 aa4.29□□□□□ -1.72
ATP2B4-204ENST00000367218 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
ATP2B4-204ENST00000367218 TENM3Q9P273 2699 aa4.28□□□□□ -1.72
ATP2B4-204ENST00000367218 KRTAP11-1Q8IUC1 163 aa4.28□□□□□ -1.72
ATP2B4-204ENST00000367218 DCHS2Q6V1P9 2916 aa4.27□□□□□ -1.73
ATP2B4-204ENST00000367218 LAMA5O15230 3695 aa4.27□□□□□ -1.73
ATP2B4-204ENST00000367218 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
ATP2B4-204ENST00000367218 TGP01266 2768 aa4.27□□□□□ -1.73
ATP2B4-204ENST00000367218 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
ATP2B4-204ENST00000367218 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
ATP2B4-204ENST00000367218 DMDP11532 3685 aa4.25□□□□□ -1.73
ATP2B4-204ENST00000367218 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
ATP2B4-204ENST00000367218 A8MUU9 505 aa4.24□□□□□ -1.73
ATP2B4-204ENST00000367218 SMG1Q96Q15 3661 aaKnown RBP4.23□□□□□ -1.73
ATP2B4-204ENST00000367218 SPENQ96T58 3664 aaKnown RBP4.22□□□□□ -1.73
ATP2B4-204ENST00000367218 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.73
ATP2B4-204ENST00000367218 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
ATP2B4-204ENST00000367218 VWFP04275 2813 aa4.2□□□□□ -1.74
ATP2B4-204ENST00000367218 FBN2P35556 2912 aa4.2□□□□□ -1.74
ATP2B4-204ENST00000367218 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
ATP2B4-204ENST00000367218 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
ATP2B4-204ENST00000367218 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
ATP2B4-204ENST00000367218 Q5VSD8 79 aa4.17□□□□□ -1.74
ATP2B4-204ENST00000367218 RELNP78509 3460 aa4.14□□□□□ -1.75
ATP2B4-204ENST00000367218 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
ATP2B4-204ENST00000367218 EYSQ5T1H1 3165 aa4.12□□□□□ -1.75
ATP2B4-204ENST00000367218 ZFHX4Q86UP3 3567 aa4.11□□□□□ -1.75
ATP2B4-204ENST00000367218 NBPF19A0A087WUL8 3843 aa4.1□□□□□ -1.75
ATP2B4-204ENST00000367218 PKD1L1Q8TDX9 2849 aa4.1□□□□□ -1.75
ATP2B4-204ENST00000367218 H0YAA0 97 aa4.1□□□□□ -1.75
ATP2B4-204ENST00000367218 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
ATP2B4-204ENST00000367218 LOC400499M0QZD8 3231 aa4.1□□□□□ -1.75
ATP2B4-204ENST00000367218 TNP1P09430 55 aa4.06□□□□□ -1.76
ATP2B4-204ENST00000367218 CSMD1Q96PZ7 3565 aa4.04□□□□□ -1.76
ATP2B4-204ENST00000367218 P0C880 135 aa4.04□□□□□ -1.76
ATP2B4-204ENST00000367218 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
ATP2B4-204ENST00000367218 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
ATP2B4-204ENST00000367218 CUBNO60494 3623 aa3.98□□□□□ -1.77
ATP2B4-204ENST00000367218 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
ATP2B4-204ENST00000367218 KRTAP13-3Q3SY46 172 aa3.97□□□□□ -1.77
ATP2B4-204ENST00000367218 KRTAP1-4P0C5Y4 121 aa3.97□□□□□ -1.77
ATP2B4-204ENST00000367218 VPS13CQ709C8 3753 aa3.95□□□□□ -1.78
ATP2B4-204ENST00000367218 TENM4Q6N022 2769 aa3.95□□□□□ -1.78
ATP2B4-204ENST00000367218 TENM2Q9NT68 2774 aa3.94□□□□□ -1.78
ATP2B4-204ENST00000367218 SVEP1Q4LDE5 3571 aa3.93□□□□□ -1.78
ATP2B4-204ENST00000367218 XP32Q5T750 250 aa3.9□□□□□ -1.78
ATP2B4-204ENST00000367218 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
ATP2B4-204ENST00000367218 MEGF8Q7Z7M0 2845 aa3.87□□□□□ -1.79
ATP2B4-204ENST00000367218 AKAP9Q99996 3911 aa3.85□□□□□ -1.79
ATP2B4-204ENST00000367218 FBN1P35555 2871 aaKnown RBP3.82□□□□□ -1.8
ATP2B4-204ENST00000367218 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
ATP2B4-204ENST00000367218 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
ATP2B4-204ENST00000367218 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
ATP2B4-204ENST00000367218 MUC3AQ02505 3323 aa3.78□□□□□ -1.8
ATP2B4-204ENST00000367218 OTOGQ6ZRI0 2925 aa3.78□□□□□ -1.8
ATP2B4-204ENST00000367218 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
ATP2B4-204ENST00000367218 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
ATP2B4-204ENST00000367218 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
ATP2B4-204ENST00000367218 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
ATP2B4-204ENST00000367218 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
ATP2B4-204ENST00000367218 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
ATP2B4-204ENST00000367218 FBN3Q75N90 2809 aa3.7□□□□□ -1.82
ATP2B4-204ENST00000367218 CSMD2Q7Z408 3487 aa3.7□□□□□ -1.82
ATP2B4-204ENST00000367218 KRTAP3-1Q9BYR8 98 aa3.69□□□□□ -1.82
ATP2B4-204ENST00000367218 KRTAP10-10P60014 251 aa3.65□□□□□ -1.82
ATP2B4-204ENST00000367218 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.82
ATP2B4-204ENST00000367218 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
ATP2B4-204ENST00000367218 INE1O15225 51 aa3.58□□□□□ -1.84
ATP2B4-204ENST00000367218 LYSTQ99698 3801 aa3.51□□□□□ -1.85
ATP2B4-204ENST00000367218 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
ATP2B4-204ENST00000367218 KRTAP3-2Q9BYR7 98 aa3.51□□□□□ -1.85
ATP2B4-204ENST00000367218 KRTAP3-3Q9BYR6 98 aa3.47□□□□□ -1.85
ATP2B4-204ENST00000367218 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
ATP2B4-204ENST00000367218 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
ATP2B4-204ENST00000367218 ZNF469Q96JG9 3925 aaPredicted RBP3.35□□□□□ -1.87
ATP2B4-204ENST00000367218 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
ATP2B4-204ENST00000367218 ANK2Q01484 3957 aa3.3□□□□□ -1.88
ATP2B4-204ENST00000367218 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
ATP2B4-204ENST00000367218 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
ATP2B4-204ENST00000367218 ANK3Q12955 4377 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms