RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
CDC42BPA-205ENST00000366769 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-205ENST00000366769 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.38
CDC42BPA-205ENST00000366769 ADGRG4Q8IZF6 3080 aa6.45□□□□□ -1.38
CDC42BPA-205ENST00000366769 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
CDC42BPA-205ENST00000366769 ATMQ13315 3056 aa6.42□□□□□ -1.38
CDC42BPA-205ENST00000366769 HTTP42858 3142 aa6.42□□□□□ -1.38
CDC42BPA-205ENST00000366769 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
CDC42BPA-205ENST00000366769 TENM4Q6N022 2769 aa6.41□□□□□ -1.38
CDC42BPA-205ENST00000366769 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.39
CDC42BPA-205ENST00000366769 WDFY4Q6ZS81 3184 aa6.4□□□□□ -1.39
CDC42BPA-205ENST00000366769 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
CDC42BPA-205ENST00000366769 SPRR1BP22528 89 aa6.37□□□□□ -1.39
CDC42BPA-205ENST00000366769 KRTAP1-3Q8IUG1 177 aa6.35□□□□□ -1.39
CDC42BPA-205ENST00000366769 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
CDC42BPA-205ENST00000366769 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
CDC42BPA-205ENST00000366769 XIRP2A4UGR9 3374 aa6.32□□□□□ -1.4
CDC42BPA-205ENST00000366769 BOD1L1Q8NFC6 3051 aa6.31□□□□□ -1.4
CDC42BPA-205ENST00000366769 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
CDC42BPA-205ENST00000366769 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
CDC42BPA-205ENST00000366769 H0YAA0 97 aa6.29□□□□□ -1.4
CDC42BPA-205ENST00000366769 COL6A3P12111 3177 aa6.27□□□□□ -1.4
CDC42BPA-205ENST00000366769 CELSR1Q9NYQ6 3014 aa6.26□□□□□ -1.41
CDC42BPA-205ENST00000366769 REV3LO60673 3130 aa6.26□□□□□ -1.41
CDC42BPA-205ENST00000366769 TNP1P09430 55 aa6.25□□□□□ -1.41
CDC42BPA-205ENST00000366769 SPTBN5Q9NRC6 3674 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-205ENST00000366769 MKI67P46013 3256 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-205ENST00000366769 P0C880 135 aa6.15□□□□□ -1.42
CDC42BPA-205ENST00000366769 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.43
CDC42BPA-205ENST00000366769 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
CDC42BPA-205ENST00000366769 DNAH14Q0VDD8 3507 aa6.11□□□□□ -1.43
CDC42BPA-205ENST00000366769 CELSR3Q9NYQ7 3312 aa6.11□□□□□ -1.43
CDC42BPA-205ENST00000366769 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
CDC42BPA-205ENST00000366769 NBPF19A0A087WUL8 3843 aa6.05□□□□□ -1.44
CDC42BPA-205ENST00000366769 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-205ENST00000366769 A0A1B0GVY2 172 aa6.04□□□□□ -1.44
CDC42BPA-205ENST00000366769 BRCA2P51587 3418 aa6.03□□□□□ -1.44
CDC42BPA-205ENST00000366769 DMDP11532 3685 aa6□□□□□ -1.45
CDC42BPA-205ENST00000366769 WDFY3Q8IZQ1 3526 aa6□□□□□ -1.45
CDC42BPA-205ENST00000366769 FBN3Q75N90 2809 aa5.99□□□□□ -1.45
CDC42BPA-205ENST00000366769 MEGF8Q7Z7M0 2845 aa5.99□□□□□ -1.45
CDC42BPA-205ENST00000366769 FBN1P35555 2871 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-205ENST00000366769 VCANP13611 3396 aa5.97□□□□□ -1.45
CDC42BPA-205ENST00000366769 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
CDC42BPA-205ENST00000366769 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
CDC42BPA-205ENST00000366769 LAMA5O15230 3695 aa5.94□□□□□ -1.46
CDC42BPA-205ENST00000366769 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
CDC42BPA-205ENST00000366769 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
CDC42BPA-205ENST00000366769 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
CDC42BPA-205ENST00000366769 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
CDC42BPA-205ENST00000366769 MYO15AQ9UKN7 3530 aa5.92□□□□□ -1.46
CDC42BPA-205ENST00000366769 USP34Q70CQ2 3546 aa5.92□□□□□ -1.46
CDC42BPA-205ENST00000366769 UNC80Q8N2C7 3258 aa5.9□□□□□ -1.46
CDC42BPA-205ENST00000366769 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-205ENST00000366769 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
CDC42BPA-205ENST00000366769 LAMA3Q16787 3333 aa5.87□□□□□ -1.47
CDC42BPA-205ENST00000366769 Q6ZRN7 208 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-205ENST00000366769 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
CDC42BPA-205ENST00000366769 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
CDC42BPA-205ENST00000366769 SPENQ96T58 3664 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-205ENST00000366769 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
CDC42BPA-205ENST00000366769 VPS13CQ709C8 3753 aa5.79□□□□□ -1.48
CDC42BPA-205ENST00000366769 CDH23Q9H251 3354 aa5.76□□□□□ -1.49
CDC42BPA-205ENST00000366769 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
CDC42BPA-205ENST00000366769 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
CDC42BPA-205ENST00000366769 SPEGQ15772 3267 aa5.68□□□□□ -1.5
CDC42BPA-205ENST00000366769 XP32Q5T750 250 aa5.68□□□□□ -1.5
CDC42BPA-205ENST00000366769 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
CDC42BPA-205ENST00000366769 ALMS1Q8TCU4 4167 aa5.65□□□□□ -1.51
CDC42BPA-205ENST00000366769 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
CDC42BPA-205ENST00000366769 SZT2Q5T011 3432 aa5.6□□□□□ -1.51
CDC42BPA-205ENST00000366769 ASPMQ8IZT6 3477 aa5.58□□□□□ -1.52
CDC42BPA-205ENST00000366769 LOC400499M0QZD8 3231 aa5.56□□□□□ -1.52
CDC42BPA-205ENST00000366769 EYSQ5T1H1 3165 aa5.56□□□□□ -1.52
CDC42BPA-205ENST00000366769 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
CDC42BPA-205ENST00000366769 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
CDC42BPA-205ENST00000366769 RELNP78509 3460 aa5.47□□□□□ -1.53
CDC42BPA-205ENST00000366769 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
CDC42BPA-205ENST00000366769 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
CDC42BPA-205ENST00000366769 BSNQ9UPA5 3926 aa5.42□□□□□ -1.54
CDC42BPA-205ENST00000366769 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
CDC42BPA-205ENST00000366769 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
CDC42BPA-205ENST00000366769 KRTAP21-3Q3LHN1 58 aa5.35□□□□□ -1.55
CDC42BPA-205ENST00000366769 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
CDC42BPA-205ENST00000366769 INE1O15225 51 aa5.34□□□□□ -1.55
CDC42BPA-205ENST00000366769 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-205ENST00000366769 CSMD3Q7Z407 3707 aa5.31□□□□□ -1.56
CDC42BPA-205ENST00000366769 SVEP1Q4LDE5 3571 aa5.3□□□□□ -1.56
CDC42BPA-205ENST00000366769 LYSTQ99698 3801 aa5.25□□□□□ -1.57
CDC42BPA-205ENST00000366769 CUBNO60494 3623 aa5.24□□□□□ -1.57
CDC42BPA-205ENST00000366769 HECTD4Q9Y4D8 3996 aa5.15□□□□□ -1.58
CDC42BPA-205ENST00000366769 KRTAP3-2Q9BYR7 98 aa5.12□□□□□ -1.59
CDC42BPA-205ENST00000366769 DNAH3Q8TD57 4116 aa5.09□□□□□ -1.6
CDC42BPA-205ENST00000366769 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
CDC42BPA-205ENST00000366769 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
CDC42BPA-205ENST00000366769 CMYA5Q8N3K9 4069 aa4.98□□□□□ -1.61
CDC42BPA-205ENST00000366769 ANK2Q01484 3957 aa4.93□□□□□ -1.62
CDC42BPA-205ENST00000366769 MUC3AQ02505 3323 aa4.91□□□□□ -1.62
CDC42BPA-205ENST00000366769 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
CDC42BPA-205ENST00000366769 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms