RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 SSBP3-AS1Q7Z2R9 100 aa11.72□□□□□ -0.53
CHD1L-201ENST00000361293 VPS13BQ7Z7G8 4022 aa11.72□□□□□ -0.53
CHD1L-201ENST00000361293 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
CHD1L-201ENST00000361293 CD164Q04900 197 aa11.69□□□□□ -0.54
CHD1L-201ENST00000361293 SMIM26A0A096LP01 95 aa11.69□□□□□ -0.54
CHD1L-201ENST00000361293 C1orf64Q8NEQ6 169 aa11.69□□□□□ -0.54
CHD1L-201ENST00000361293 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
CHD1L-201ENST00000361293 H3BPC8 53 aa11.67□□□□□ -0.54
CHD1L-201ENST00000361293 KRTAP1-4P0C5Y4 121 aa11.66□□□□□ -0.54
CHD1L-201ENST00000361293 NDUFS5O43920 106 aa11.65□□□□□ -0.54
CHD1L-201ENST00000361293 MRPL34Q9BQ48 92 aaKnown RBP11.65□□□□□ -0.54
CHD1L-201ENST00000361293 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
CHD1L-201ENST00000361293 CYP4F30PQ9H0H9 118 aa11.62□□□□□ -0.55
CHD1L-201ENST00000361293 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
CHD1L-201ENST00000361293 PCOTHQ58A44 107 aa11.54□□□□□ -0.56
CHD1L-201ENST00000361293 C1orf195Q5TG92 126 aa11.54□□□□□ -0.56
CHD1L-201ENST00000361293 SPANXA2-OT1Q8N9U9 137 aa11.54□□□□□ -0.56
CHD1L-201ENST00000361293 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
CHD1L-201ENST00000361293 Q5W150 140 aa11.5□□□□□ -0.57
CHD1L-201ENST00000361293 SMR3BP02814 79 aaPredicted RBP11.47□□□□□ -0.57
CHD1L-201ENST00000361293 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
CHD1L-201ENST00000361293 C8orf87E5RJ46 101 aa11.46□□□□□ -0.58
CHD1L-201ENST00000361293 KRTAP13-3Q3SY46 172 aa11.45□□□□□ -0.58
CHD1L-201ENST00000361293 A0A1B0GVY2 172 aa11.45□□□□□ -0.58
CHD1L-201ENST00000361293 LINC00336Q6ZUF6 198 aa11.45□□□□□ -0.58
CHD1L-201ENST00000361293 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
CHD1L-201ENST00000361293 LINC00313P59037 77 aa11.44□□□□□ -0.58
CHD1L-201ENST00000361293 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
CHD1L-201ENST00000361293 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
CHD1L-201ENST00000361293 PRR26Q8N8Z3 221 aa11.4□□□□□ -0.59
CHD1L-201ENST00000361293 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
CHD1L-201ENST00000361293 KRTAP16-1A8MUX0 517 aa11.36□□□□□ -0.59
CHD1L-201ENST00000361293 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-201ENST00000361293 FAT1Q14517 4588 aa11.35□□□□□ -0.59
CHD1L-201ENST00000361293 Q1T7F1 81 aa11.35□□□□□ -0.59
CHD1L-201ENST00000361293 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
CHD1L-201ENST00000361293 RETNLBQ9BQ08 111 aa11.34□□□□□ -0.59
CHD1L-201ENST00000361293 APOBP04114 4563 aaKnown RBP11.34□□□□□ -0.59
CHD1L-201ENST00000361293 RYR2Q92736 4967 aa11.34□□□□□ -0.59
CHD1L-201ENST00000361293 KMT2CQ8NEZ4 4911 aaKnown RBP11.33□□□□□ -0.59
CHD1L-201ENST00000361293 SPINK1P00995 79 aa11.33□□□□□ -0.6
CHD1L-201ENST00000361293 COA5Q86WW8 74 aa11.33□□□□□ -0.6
CHD1L-201ENST00000361293 KRTAP10-4P60372 401 aaPredicted RBP11.31□□□□□ -0.6
CHD1L-201ENST00000361293 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
CHD1L-201ENST00000361293 FAM229AH3BQW9 127 aa11.27□□□□□ -0.61
CHD1L-201ENST00000361293 PSPHP1O15172 72 aa11.27□□□□□ -0.61
CHD1L-201ENST00000361293 HRES1P13985 223 aa11.23□□□□□ -0.61
CHD1L-201ENST00000361293 A8MUN3 132 aa11.19□□□□□ -0.62
CHD1L-201ENST00000361293 BRK1Q8WUW1 75 aa11.19□□□□□ -0.62
CHD1L-201ENST00000361293 RPS29P62273 56 aaKnown RBP11.18□□□□□ -0.62
CHD1L-201ENST00000361293 IGKV2-30P06310 120 aa11.17□□□□□ -0.62
CHD1L-201ENST00000361293 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
CHD1L-201ENST00000361293 PKHD1L1Q86WI1 4243 aa11.15□□□□□ -0.62
CHD1L-201ENST00000361293 V9GYY9 64 aa11.15□□□□□ -0.62
CHD1L-201ENST00000361293 PRO0628Q9UI54 55 aa11.14□□□□□ -0.63
CHD1L-201ENST00000361293 Q5VV11 94 aa11.11□□□□□ -0.63
CHD1L-201ENST00000361293 IGKV2D-30A0A075B6S6 120 aa11.1□□□□□ -0.63
CHD1L-201ENST00000361293 PRR15LQ9BU68 103 aa11.08□□□□□ -0.64
CHD1L-201ENST00000361293 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
CHD1L-201ENST00000361293 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
CHD1L-201ENST00000361293 ACYP2P14621 99 aa11.03□□□□□ -0.64
CHD1L-201ENST00000361293 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
CHD1L-201ENST00000361293 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
CHD1L-201ENST00000361293 RYR3Q15413 4870 aa10.97□□□□□ -0.65
CHD1L-201ENST00000361293 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
CHD1L-201ENST00000361293 A8MU10 97 aa10.96□□□□□ -0.66
CHD1L-201ENST00000361293 HSPG2P98160 4391 aa10.96□□□□□ -0.66
CHD1L-201ENST00000361293 LRP1Q07954 4544 aaKnown RBP10.96□□□□□ -0.66
CHD1L-201ENST00000361293 Q75L30 129 aa10.93□□□□□ -0.66
CHD1L-201ENST00000361293 Q8N1X5 172 aa10.91□□□□□ -0.66
CHD1L-201ENST00000361293 Q5VSD8 79 aa10.91□□□□□ -0.66
CHD1L-201ENST00000361293 C20orf166-AS1Q96NR2 134 aa10.91□□□□□ -0.66
CHD1L-201ENST00000361293 A8MUU9 505 aa10.9□□□□□ -0.66
CHD1L-201ENST00000361293 C7orf65Q6ZTY9 151 aa10.9□□□□□ -0.66
CHD1L-201ENST00000361293 KRTAP17-1Q9BYP8 105 aa10.88□□□□□ -0.67
CHD1L-201ENST00000361293 TNXBP22105 4242 aa10.87□□□□□ -0.67
CHD1L-201ENST00000361293 A6NED7 52 aa10.82□□□□□ -0.68
CHD1L-201ENST00000361293 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
CHD1L-201ENST00000361293 LCA10Q71F78 164 aa10.8□□□□□ -0.68
CHD1L-201ENST00000361293 RYR1P21817 5038 aa10.79□□□□□ -0.68
CHD1L-201ENST00000361293 SPINK7P58062 85 aa10.78□□□□□ -0.68
CHD1L-201ENST00000361293 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.68
CHD1L-201ENST00000361293 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
CHD1L-201ENST00000361293 KIAA1109Q2LD37 5005 aa10.73□□□□□ -0.69
CHD1L-201ENST00000361293 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
CHD1L-201ENST00000361293 CDC42SE1Q9NRR8 79 aa10.67□□□□□ -0.7
CHD1L-201ENST00000361293 A0A1B0GU69 56 aa10.66□□□□□ -0.7
CHD1L-201ENST00000361293 KRTAP3-1Q9BYR8 98 aa10.66□□□□□ -0.7
CHD1L-201ENST00000361293 SPTSSBQ8NFR3 76 aa10.62□□□□□ -0.71
CHD1L-201ENST00000361293 MT1HL1P0DM35 61 aa10.6□□□□□ -0.71
CHD1L-201ENST00000361293 EPPK1P58107 5090 aaKnown RBP10.58□□□□□ -0.72
CHD1L-201ENST00000361293 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
CHD1L-201ENST00000361293 PMAIP1Q13794 54 aa10.55□□□□□ -0.72
CHD1L-201ENST00000361293 XP32Q5T750 250 aa10.53□□□□□ -0.72
CHD1L-201ENST00000361293 RPL37P61927 97 aaKnown RBP10.5□□□□□ -0.73
CHD1L-201ENST00000361293 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
CHD1L-201ENST00000361293 A6NN06 94 aa10.42□□□□□ -0.74
CHD1L-201ENST00000361293 UQCR11O14957 56 aa10.41□□□□□ -0.74
CHD1L-201ENST00000361293 SPATA8Q6RVD6 105 aa10.4□□□□□ -0.75
CHD1L-201ENST00000361293 SEC61GP60059 68 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 291.5 ms