RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 KRTAP29-1A8MX34 341 aaPredicted RBP12.17□□□□□ -0.46
NCKAP1-201ENST00000360982 ASB16-AS1Q495Z4 193 aa12.17□□□□□ -0.46
NCKAP1-201ENST00000360982 PANO1I0J062 215 aa12.16□□□□□ -0.46
NCKAP1-201ENST00000360982 DMAC1Q96GE9 116 aa12.16□□□□□ -0.46
NCKAP1-201ENST00000360982 A8MU10 97 aa12.15□□□□□ -0.47
NCKAP1-201ENST00000360982 R4GN34 69 aa12.15□□□□□ -0.47
NCKAP1-201ENST00000360982 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
NCKAP1-201ENST00000360982 DCHS2Q6V1P9 2916 aa12.12□□□□□ -0.47
NCKAP1-201ENST00000360982 NF1P21359 2839 aa12.09□□□□□ -0.47
NCKAP1-201ENST00000360982 LUZP6Q538Z0 58 aa12.06□□□□□ -0.48
NCKAP1-201ENST00000360982 Q6ZRN7 208 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1-201ENST00000360982 A0A087X002 238 aa12.02□□□□□ -0.48
NCKAP1-201ENST00000360982 SPATA8Q6RVD6 105 aa11.98□□□□□ -0.49
NCKAP1-201ENST00000360982 FBN2P35556 2912 aa11.97□□□□□ -0.49
NCKAP1-201ENST00000360982 HRNRQ86YZ3 2850 aaPredicted RBP11.96□□□□□ -0.49
NCKAP1-201ENST00000360982 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
NCKAP1-201ENST00000360982 ADM2Q7Z4H4 148 aa11.94□□□□□ -0.5
NCKAP1-201ENST00000360982 DCHS1Q96JQ0 3298 aa11.86□□□□□ -0.51
NCKAP1-201ENST00000360982 M0QZ58 72 aa11.84□□□□□ -0.51
NCKAP1-201ENST00000360982 ROMO1P60602 79 aa11.83□□□□□ -0.52
NCKAP1-201ENST00000360982 RPL37P61927 97 aaKnown RBP11.82□□□□□ -0.52
NCKAP1-201ENST00000360982 RELNP78509 3460 aa11.82□□□□□ -0.52
NCKAP1-201ENST00000360982 MUC3AQ02505 3323 aa11.8□□□□□ -0.52
NCKAP1-201ENST00000360982 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.53
NCKAP1-201ENST00000360982 A0A0A0MQY5 61 aa11.77□□□□□ -0.53
NCKAP1-201ENST00000360982 H1FX-AS1Q4G0G2 97 aa11.76□□□□□ -0.53
NCKAP1-201ENST00000360982 KRTAP25-1Q3LHN0 102 aa11.75□□□□□ -0.53
NCKAP1-201ENST00000360982 PLAC4Q8WY50 150 aa11.74□□□□□ -0.53
NCKAP1-201ENST00000360982 NOTCH2NLQ7Z3S9 236 aa11.72□□□□□ -0.53
NCKAP1-201ENST00000360982 KRTAP7-1Q8IUC3 87 aa11.71□□□□□ -0.53
NCKAP1-201ENST00000360982 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
NCKAP1-201ENST00000360982 WDFY3Q8IZQ1 3526 aa11.67□□□□□ -0.54
NCKAP1-201ENST00000360982 KRTAP13-1Q8IUC0 172 aa11.67□□□□□ -0.54
NCKAP1-201ENST00000360982 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
NCKAP1-201ENST00000360982 LAMA5O15230 3695 aa11.66□□□□□ -0.54
NCKAP1-201ENST00000360982 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
NCKAP1-201ENST00000360982 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
NCKAP1-201ENST00000360982 ASPMQ8IZT6 3477 aa11.58□□□□□ -0.56
NCKAP1-201ENST00000360982 NDUFAF8A1L188 74 aa11.48□□□□□ -0.57
NCKAP1-201ENST00000360982 C20orf166-AS1Q96NR2 134 aa11.45□□□□□ -0.58
NCKAP1-201ENST00000360982 DMDP11532 3685 aa11.44□□□□□ -0.58
NCKAP1-201ENST00000360982 TENM1Q9UKZ4 2725 aa11.42□□□□□ -0.58
NCKAP1-201ENST00000360982 A8MUU9 505 aa11.42□□□□□ -0.58
NCKAP1-201ENST00000360982 CELSR1Q9NYQ6 3014 aa11.41□□□□□ -0.58
NCKAP1-201ENST00000360982 PKD1L1Q8TDX9 2849 aa11.41□□□□□ -0.58
NCKAP1-201ENST00000360982 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
NCKAP1-201ENST00000360982 FBN1P35555 2871 aaKnown RBP11.25□□□□□ -0.61
NCKAP1-201ENST00000360982 TENM2Q9NT68 2774 aa11.21□□□□□ -0.61
NCKAP1-201ENST00000360982 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
NCKAP1-201ENST00000360982 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
NCKAP1-201ENST00000360982 PDZD2O15018 2839 aa11.15□□□□□ -0.62
NCKAP1-201ENST00000360982 VWFP04275 2813 aa11.12□□□□□ -0.63
NCKAP1-201ENST00000360982 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
NCKAP1-201ENST00000360982 SMG1Q96Q15 3661 aaKnown RBP11.09□□□□□ -0.63
NCKAP1-201ENST00000360982 XP32Q5T750 250 aa11.09□□□□□ -0.63
NCKAP1-201ENST00000360982 TPRXLQ17RH7 258 aa11.05□□□□□ -0.64
NCKAP1-201ENST00000360982 TGP01266 2768 aa11.03□□□□□ -0.64
NCKAP1-201ENST00000360982 NBPF19A0A087WUL8 3843 aa11.03□□□□□ -0.64
NCKAP1-201ENST00000360982 TNP1P09430 55 aa11.01□□□□□ -0.65
NCKAP1-201ENST00000360982 H0YAA0 97 aa10.97□□□□□ -0.65
NCKAP1-201ENST00000360982 C10orf95Q9H7T3 257 aa10.9□□□□□ -0.66
NCKAP1-201ENST00000360982 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
NCKAP1-201ENST00000360982 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
NCKAP1-201ENST00000360982 CSMD2Q7Z408 3487 aa10.8□□□□□ -0.68
NCKAP1-201ENST00000360982 CUBNO60494 3623 aa10.8□□□□□ -0.68
NCKAP1-201ENST00000360982 SVEP1Q4LDE5 3571 aa10.79□□□□□ -0.68
NCKAP1-201ENST00000360982 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
NCKAP1-201ENST00000360982 KRTAP10-8P60410 259 aa10.75□□□□□ -0.69
NCKAP1-201ENST00000360982 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
NCKAP1-201ENST00000360982 KRTAP10-10P60014 251 aa10.7□□□□□ -0.7
NCKAP1-201ENST00000360982 P0C880 135 aa10.67□□□□□ -0.7
NCKAP1-201ENST00000360982 PP632Q6XCG6 107 aa10.66□□□□□ -0.7
NCKAP1-201ENST00000360982 SPENQ96T58 3664 aaKnown RBP10.63□□□□□ -0.71
NCKAP1-201ENST00000360982 PRO2289Q9P1D8 64 aa10.58□□□□□ -0.72
NCKAP1-201ENST00000360982 TRRAPQ9Y4A5 3859 aa10.4□□□□□ -0.74
NCKAP1-201ENST00000360982 FBN3Q75N90 2809 aa10.36□□□□□ -0.75
NCKAP1-201ENST00000360982 ANK3Q12955 4377 aaKnown RBP10.29□□□□□ -0.76
NCKAP1-201ENST00000360982 BSNQ9UPA5 3926 aa10.27□□□□□ -0.77
NCKAP1-201ENST00000360982 COL7A1Q02388 2944 aa10.21□□□□□ -0.78
NCKAP1-201ENST00000360982 MEGF8Q7Z7M0 2845 aa10.13□□□□□ -0.79
NCKAP1-201ENST00000360982 KRTAP12-2P59991 146 aa10.1□□□□□ -0.79
NCKAP1-201ENST00000360982 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
NCKAP1-201ENST00000360982 KRTAP12-1P59990 96 aa9.94□□□□□ -0.82
NCKAP1-201ENST00000360982 KRTAP15-1Q3LI76 137 aa9.83□□□□□ -0.84
NCKAP1-201ENST00000360982 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
NCKAP1-201ENST00000360982 VPS13CQ709C8 3753 aa9.81□□□□□ -0.84
NCKAP1-201ENST00000360982 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
NCKAP1-201ENST00000360982 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-201ENST00000360982 ZNF469Q96JG9 3925 aaPredicted RBP9.69□□□□□ -0.86
NCKAP1-201ENST00000360982 HUWE1Q7Z6Z7 4374 aaKnown RBP9.52□□□□□ -0.88
NCKAP1-201ENST00000360982 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
NCKAP1-201ENST00000360982 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
NCKAP1-201ENST00000360982 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
NCKAP1-201ENST00000360982 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
NCKAP1-201ENST00000360982 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
NCKAP1-201ENST00000360982 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
NCKAP1-201ENST00000360982 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
NCKAP1-201ENST00000360982 INE1O15225 51 aa9.22□□□□□ -0.93
NCKAP1-201ENST00000360982 DNAH9Q9NYC9 4486 aa9.21□□□□□ -0.93
NCKAP1-201ENST00000360982 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms