RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 Q5VSD8 79 aa12.07□□□□□ -0.48
FAM3A-202ENST00000359889 C1orf195Q5TG92 126 aa12.06□□□□□ -0.48
FAM3A-202ENST00000359889 FAT1Q14517 4588 aa12.03□□□□□ -0.48
FAM3A-202ENST00000359889 C8orf87E5RJ46 101 aa12.03□□□□□ -0.48
FAM3A-202ENST00000359889 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
FAM3A-202ENST00000359889 TMEM254Q8TBM7 123 aa12.02□□□□□ -0.49
FAM3A-202ENST00000359889 KLKP1Q107X0 134 aa12.01□□□□□ -0.49
FAM3A-202ENST00000359889 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
FAM3A-202ENST00000359889 TP53AIP1Q9HCN2 124 aa11.97□□□□□ -0.49
FAM3A-202ENST00000359889 SNURFQ9Y675 71 aa11.97□□□□□ -0.49
FAM3A-202ENST00000359889 NDUFC1O43677 76 aa11.96□□□□□ -0.49
FAM3A-202ENST00000359889 MP68P56378 58 aa11.96□□□□□ -0.49
FAM3A-202ENST00000359889 LINC00313P59037 77 aa11.94□□□□□ -0.5
FAM3A-202ENST00000359889 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
FAM3A-202ENST00000359889 NDUFS5O43920 106 aa11.93□□□□□ -0.5
FAM3A-202ENST00000359889 CYSTM1Q9H1C7 97 aa11.93□□□□□ -0.5
FAM3A-202ENST00000359889 NOTCH2NLQ7Z3S9 236 aa11.92□□□□□ -0.5
FAM3A-202ENST00000359889 TMEM258P61165 79 aa11.91□□□□□ -0.5
FAM3A-202ENST00000359889 Q8N1X5 172 aa11.9□□□□□ -0.5
FAM3A-202ENST00000359889 H0Y9P7 68 aa11.87□□□□□ -0.51
FAM3A-202ENST00000359889 H3BPC8 53 aa11.87□□□□□ -0.51
FAM3A-202ENST00000359889 HSPG2P98160 4391 aa11.86□□□□□ -0.51
FAM3A-202ENST00000359889 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
FAM3A-202ENST00000359889 H7BZZ5 65 aa11.85□□□□□ -0.51
FAM3A-202ENST00000359889 RYR1P21817 5038 aa11.84□□□□□ -0.51
FAM3A-202ENST00000359889 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
FAM3A-202ENST00000359889 KRTAP10-8P60410 259 aa11.81□□□□□ -0.52
FAM3A-202ENST00000359889 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
FAM3A-202ENST00000359889 ZCCHC13Q8WW36 166 aaKnown RBP11.8□□□□□ -0.52
FAM3A-202ENST00000359889 C1orf64Q8NEQ6 169 aa11.76□□□□□ -0.53
FAM3A-202ENST00000359889 FAM236DA0A1B0GTK5 79 aa11.75□□□□□ -0.53
FAM3A-202ENST00000359889 FAM236CP0DP71 79 aa11.75□□□□□ -0.53
FAM3A-202ENST00000359889 Q8N9P0 234 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-202ENST00000359889 ATP5EP56381 51 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-202ENST00000359889 KRTAP16-1A8MUX0 517 aa11.72□□□□□ -0.53
FAM3A-202ENST00000359889 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
FAM3A-202ENST00000359889 KIAA1109Q2LD37 5005 aa11.68□□□□□ -0.54
FAM3A-202ENST00000359889 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
FAM3A-202ENST00000359889 EPPK1P58107 5090 aaKnown RBP11.66□□□□□ -0.54
FAM3A-202ENST00000359889 LOC101927531A0A1B0GV80 90 aa11.63□□□□□ -0.55
FAM3A-202ENST00000359889 Q5W150 140 aa11.62□□□□□ -0.55
FAM3A-202ENST00000359889 OXTP01178 125 aa11.61□□□□□ -0.55
FAM3A-202ENST00000359889 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
FAM3A-202ENST00000359889 FP248Q71RG6 208 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-202ENST00000359889 RPS28P62857 69 aaKnown RBP11.59□□□□□ -0.55
FAM3A-202ENST00000359889 C9orf92A6NGG3 77 aa11.58□□□□□ -0.56
FAM3A-202ENST00000359889 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
FAM3A-202ENST00000359889 SPANXA2-OT1Q8N9U9 137 aa11.55□□□□□ -0.56
FAM3A-202ENST00000359889 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
FAM3A-202ENST00000359889 FLG2Q5D862 2391 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-202ENST00000359889 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
FAM3A-202ENST00000359889 PCOTHQ58A44 107 aa11.52□□□□□ -0.56
FAM3A-202ENST00000359889 TNXBP22105 4242 aa11.52□□□□□ -0.57
FAM3A-202ENST00000359889 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
FAM3A-202ENST00000359889 C20orf166-AS1Q96NR2 134 aa11.5□□□□□ -0.57
FAM3A-202ENST00000359889 CYP4F30PQ9H0H9 118 aa11.5□□□□□ -0.57
FAM3A-202ENST00000359889 A8MUU9 505 aa11.49□□□□□ -0.57
FAM3A-202ENST00000359889 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
FAM3A-202ENST00000359889 IGKV2-30P06310 120 aa11.46□□□□□ -0.58
FAM3A-202ENST00000359889 PRR4Q16378 134 aa11.45□□□□□ -0.58
FAM3A-202ENST00000359889 KRTAP4-5Q9BYR2 181 aa11.44□□□□□ -0.58
FAM3A-202ENST00000359889 Q75L30 129 aa11.4□□□□□ -0.58
FAM3A-202ENST00000359889 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
FAM3A-202ENST00000359889 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
FAM3A-202ENST00000359889 C7orf65Q6ZTY9 151 aa11.35□□□□□ -0.59
FAM3A-202ENST00000359889 SVIPQ8NHG7 77 aa11.32□□□□□ -0.6
FAM3A-202ENST00000359889 MYCBP2O75592 4640 aa11.32□□□□□ -0.6
FAM3A-202ENST00000359889 HRES1P13985 223 aa11.32□□□□□ -0.6
FAM3A-202ENST00000359889 J3QL48 77 aa11.29□□□□□ -0.6
FAM3A-202ENST00000359889 SMIM26A0A096LP01 95 aa11.28□□□□□ -0.6
FAM3A-202ENST00000359889 ATP11AUNQ6ZP68 121 aa11.28□□□□□ -0.6
FAM3A-202ENST00000359889 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
FAM3A-202ENST00000359889 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
FAM3A-202ENST00000359889 XP32Q5T750 250 aa11.24□□□□□ -0.61
FAM3A-202ENST00000359889 TPRXLQ17RH7 258 aa11.21□□□□□ -0.62
FAM3A-202ENST00000359889 ACYP2P14621 99 aa11.2□□□□□ -0.62
FAM3A-202ENST00000359889 COA5Q86WW8 74 aa11.2□□□□□ -0.62
FAM3A-202ENST00000359889 DMAC1Q96GE9 116 aa11.18□□□□□ -0.62
FAM3A-202ENST00000359889 SPINK7P58062 85 aa11.17□□□□□ -0.62
FAM3A-202ENST00000359889 HERC2O95714 4834 aa11.16□□□□□ -0.62
FAM3A-202ENST00000359889 A8MUN3 132 aa11.08□□□□□ -0.64
FAM3A-202ENST00000359889 ABCA13Q86UQ4 5058 aa11.08□□□□□ -0.64
FAM3A-202ENST00000359889 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
FAM3A-202ENST00000359889 C4orf26Q17RF5 130 aa11.06□□□□□ -0.64
FAM3A-202ENST00000359889 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
FAM3A-202ENST00000359889 V9GYY9 64 aa11.02□□□□□ -0.65
FAM3A-202ENST00000359889 Q1T7F1 81 aa10.98□□□□□ -0.65
FAM3A-202ENST00000359889 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
FAM3A-202ENST00000359889 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
FAM3A-202ENST00000359889 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
FAM3A-202ENST00000359889 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
FAM3A-202ENST00000359889 LINC01558Q9Y6Z2 57 aa10.81□□□□□ -0.68
FAM3A-202ENST00000359889 PSPHP1O15172 72 aa10.78□□□□□ -0.68
FAM3A-202ENST00000359889 PRR15LQ9BU68 103 aa10.77□□□□□ -0.69
FAM3A-202ENST00000359889 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
FAM3A-202ENST00000359889 LPAP08519 4548 aa10.7□□□□□ -0.7
FAM3A-202ENST00000359889 LRP2P98164 4655 aa10.69□□□□□ -0.7
FAM3A-202ENST00000359889 Q5VV11 94 aa10.65□□□□□ -0.7
FAM3A-202ENST00000359889 A0A1B0GU69 56 aa10.64□□□□□ -0.71
FAM3A-202ENST00000359889 H1FX-AS1Q4G0G2 97 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms