RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
NIF3L1-201ENST00000359683 A0A087WSZ3 146 aa7.03□□□□□ -1.28
NIF3L1-201ENST00000359683 A0A1B0GW54 56 aa7.03□□□□□ -1.28
NIF3L1-201ENST00000359683 LRP2P98164 4655 aa7.02□□□□□ -1.29
NIF3L1-201ENST00000359683 KRTAP4-11Q9BYQ6 195 aa7.01□□□□□ -1.29
NIF3L1-201ENST00000359683 SS18L2Q9UHA2 77 aa7.01□□□□□ -1.29
NIF3L1-201ENST00000359683 RETNLBQ9BQ08 111 aa7.01□□□□□ -1.29
NIF3L1-201ENST00000359683 C1orf195Q5TG92 126 aa7□□□□□ -1.29
NIF3L1-201ENST00000359683 FP248Q71RG6 208 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-201ENST00000359683 Q96NJ1 140 aa6.96□□□□□ -1.3
NIF3L1-201ENST00000359683 PRR4Q16378 134 aa6.95□□□□□ -1.3
NIF3L1-201ENST00000359683 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
NIF3L1-201ENST00000359683 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
NIF3L1-201ENST00000359683 K7ERU9 68 aa6.94□□□□□ -1.3
NIF3L1-201ENST00000359683 NREPQ16612 68 aa6.9□□□□□ -1.3
NIF3L1-201ENST00000359683 RNF213Q63HN8 5207 aa6.9□□□□□ -1.3
NIF3L1-201ENST00000359683 LINC00846Q9NV44 126 aa6.9□□□□□ -1.31
NIF3L1-201ENST00000359683 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
NIF3L1-201ENST00000359683 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
NIF3L1-201ENST00000359683 IGKV4-1P06312 121 aa6.88□□□□□ -1.31
NIF3L1-201ENST00000359683 J3KT08 172 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 ACYP1P07311 99 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 Q6ZVQ6 151 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 FAM240AA0A1B0GVK7 77 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
NIF3L1-201ENST00000359683 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
NIF3L1-201ENST00000359683 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
NIF3L1-201ENST00000359683 LPAP08519 4548 aa6.84□□□□□ -1.31
NIF3L1-201ENST00000359683 J3QR89 54 aa6.83□□□□□ -1.32
NIF3L1-201ENST00000359683 A8MWP4 228 aa6.81□□□□□ -1.32
NIF3L1-201ENST00000359683 BPY2O14599 106 aa6.81□□□□□ -1.32
NIF3L1-201ENST00000359683 DSCR10P59022 87 aa6.81□□□□□ -1.32
NIF3L1-201ENST00000359683 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
NIF3L1-201ENST00000359683 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
NIF3L1-201ENST00000359683 NDUFB1O75438 58 aa6.79□□□□□ -1.32
NIF3L1-201ENST00000359683 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
NIF3L1-201ENST00000359683 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
NIF3L1-201ENST00000359683 PRR15Q8IV56 129 aa6.77□□□□□ -1.33
NIF3L1-201ENST00000359683 LINC00313P59037 77 aa6.76□□□□□ -1.33
NIF3L1-201ENST00000359683 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
NIF3L1-201ENST00000359683 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
NIF3L1-201ENST00000359683 CXCL6P80162 114 aa6.75□□□□□ -1.33
NIF3L1-201ENST00000359683 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
NIF3L1-201ENST00000359683 K7EQZ3 153 aa6.74□□□□□ -1.33
NIF3L1-201ENST00000359683 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
NIF3L1-201ENST00000359683 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
NIF3L1-201ENST00000359683 C8orf17Q9NRJ1 99 aa6.72□□□□□ -1.33
NIF3L1-201ENST00000359683 Q8N9L7 120 aa6.72□□□□□ -1.33
NIF3L1-201ENST00000359683 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
NIF3L1-201ENST00000359683 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
NIF3L1-201ENST00000359683 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
NIF3L1-201ENST00000359683 A8MUU9 505 aa6.68□□□□□ -1.34
NIF3L1-201ENST00000359683 Q75L30 129 aa6.68□□□□□ -1.34
NIF3L1-201ENST00000359683 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
NIF3L1-201ENST00000359683 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
NIF3L1-201ENST00000359683 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
NIF3L1-201ENST00000359683 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.35
NIF3L1-201ENST00000359683 TMEM254Q8TBM7 123 aa6.65□□□□□ -1.35
NIF3L1-201ENST00000359683 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-201ENST00000359683 A0A0U1RQV1 116 aa6.63□□□□□ -1.35
NIF3L1-201ENST00000359683 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
NIF3L1-201ENST00000359683 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
NIF3L1-201ENST00000359683 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
NIF3L1-201ENST00000359683 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
NIF3L1-201ENST00000359683 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
NIF3L1-201ENST00000359683 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
NIF3L1-201ENST00000359683 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
NIF3L1-201ENST00000359683 PCOTHQ58A44 107 aa6.6□□□□□ -1.35
NIF3L1-201ENST00000359683 MUC2Q02817 5179 aa6.6□□□□□ -1.35
NIF3L1-201ENST00000359683 ATP11AUNQ6ZP68 121 aa6.59□□□□□ -1.35
NIF3L1-201ENST00000359683 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
NIF3L1-201ENST00000359683 A0A087WVE0 104 aa6.56□□□□□ -1.36
NIF3L1-201ENST00000359683 IMUPQ9GZP8 106 aa6.55□□□□□ -1.36
NIF3L1-201ENST00000359683 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-201ENST00000359683 NDUFS5O43920 106 aa6.54□□□□□ -1.36
NIF3L1-201ENST00000359683 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
NIF3L1-201ENST00000359683 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
NIF3L1-201ENST00000359683 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
NIF3L1-201ENST00000359683 Q5W150 140 aa6.49□□□□□ -1.37
NIF3L1-201ENST00000359683 TP53AIP1Q9HCN2 124 aa6.49□□□□□ -1.37
NIF3L1-201ENST00000359683 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
NIF3L1-201ENST00000359683 UQCRQO14949 82 aa6.42□□□□□ -1.38
NIF3L1-201ENST00000359683 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
NIF3L1-201ENST00000359683 SPINK7P58062 85 aa6.41□□□□□ -1.38
NIF3L1-201ENST00000359683 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
NIF3L1-201ENST00000359683 FAM236AA0A1B0GUQ0 79 aa6.39□□□□□ -1.39
NIF3L1-201ENST00000359683 FAM236BA0A1B0GV22 79 aa6.39□□□□□ -1.39
NIF3L1-201ENST00000359683 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
NIF3L1-201ENST00000359683 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
NIF3L1-201ENST00000359683 HRES1P13985 223 aa6.36□□□□□ -1.39
NIF3L1-201ENST00000359683 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
NIF3L1-201ENST00000359683 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
NIF3L1-201ENST00000359683 H0Y9P7 68 aa6.34□□□□□ -1.39
NIF3L1-201ENST00000359683 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
NIF3L1-201ENST00000359683 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
NIF3L1-201ENST00000359683 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
NIF3L1-201ENST00000359683 MPLKIPQ8TAP9 179 aa6.33□□□□□ -1.4
NIF3L1-201ENST00000359683 ATOX1O00244 68 aa6.32□□□□□ -1.4
NIF3L1-201ENST00000359683 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms