RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
FAM3D-201ENST00000358781 A0A1B0GW54 56 aa8.88□□□□□ -0.99
FAM3D-201ENST00000358781 J3KT08 172 aa8.87□□□□□ -0.99
FAM3D-201ENST00000358781 A0A1B0GVX0 72 aa8.86□□□□□ -0.99
FAM3D-201ENST00000358781 H3BT86 120 aa8.86□□□□□ -0.99
FAM3D-201ENST00000358781 MT1HP80294 61 aa8.86□□□□□ -0.99
FAM3D-201ENST00000358781 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
FAM3D-201ENST00000358781 FLGP20930 4061 aaPredicted RBP8.84□□□□□ -0.99
FAM3D-201ENST00000358781 COX6B2Q6YFQ2 88 aa8.83□□□□□ -1
FAM3D-201ENST00000358781 MTURNQ8N3F0 131 aa8.82□□□□□ -1
FAM3D-201ENST00000358781 COL5A1-AS1Q5SY13 56 aa8.8□□□□□ -1
FAM3D-201ENST00000358781 SPCS1Q9Y6A9 102 aa8.8□□□□□ -1
FAM3D-201ENST00000358781 NDUFB1O75438 58 aa8.79□□□□□ -1
FAM3D-201ENST00000358781 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
FAM3D-201ENST00000358781 A8MWP4 228 aa8.77□□□□□ -1.01
FAM3D-201ENST00000358781 NREPQ16612 68 aa8.76□□□□□ -1.01
FAM3D-201ENST00000358781 IGKV3D-7A0A0C4DH55 119 aa8.74□□□□□ -1.01
FAM3D-201ENST00000358781 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
FAM3D-201ENST00000358781 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
FAM3D-201ENST00000358781 M0R2T5 61 aa8.7□□□□□ -1.02
FAM3D-201ENST00000358781 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
FAM3D-201ENST00000358781 Q8N9P0 234 aaPredicted RBP8.69□□□□□ -1.02
FAM3D-201ENST00000358781 K7EP34 96 aa8.68□□□□□ -1.02
FAM3D-201ENST00000358781 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
FAM3D-201ENST00000358781 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
FAM3D-201ENST00000358781 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
FAM3D-201ENST00000358781 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
FAM3D-201ENST00000358781 PCP4L1A6NKN8 68 aa8.65□□□□□ -1.02
FAM3D-201ENST00000358781 Q6ZVQ6 151 aa8.65□□□□□ -1.02
FAM3D-201ENST00000358781 HRES1P13985 223 aa8.63□□□□□ -1.03
FAM3D-201ENST00000358781 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
FAM3D-201ENST00000358781 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
FAM3D-201ENST00000358781 K7EQZ3 153 aa8.61□□□□□ -1.03
FAM3D-201ENST00000358781 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
FAM3D-201ENST00000358781 BPY2O14599 106 aa8.6□□□□□ -1.03
FAM3D-201ENST00000358781 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
FAM3D-201ENST00000358781 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
FAM3D-201ENST00000358781 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
FAM3D-201ENST00000358781 FAM236DA0A1B0GTK5 79 aa8.57□□□□□ -1.04
FAM3D-201ENST00000358781 FAM236CP0DP71 79 aa8.57□□□□□ -1.04
FAM3D-201ENST00000358781 MRPL34Q9BQ48 92 aaKnown RBP8.57□□□□□ -1.04
FAM3D-201ENST00000358781 SPINK7P58062 85 aa8.56□□□□□ -1.04
FAM3D-201ENST00000358781 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
FAM3D-201ENST00000358781 LINC00846Q9NV44 126 aa8.54□□□□□ -1.04
FAM3D-201ENST00000358781 F8W1H4 67 aa8.52□□□□□ -1.05
FAM3D-201ENST00000358781 Q8N9L7 120 aa8.52□□□□□ -1.05
FAM3D-201ENST00000358781 UBL5Q9BZL1 73 aa8.51□□□□□ -1.05
FAM3D-201ENST00000358781 NDUFS5O43920 106 aa8.49□□□□□ -1.05
FAM3D-201ENST00000358781 ETDBQ3ZM63 59 aa8.47□□□□□ -1.05
FAM3D-201ENST00000358781 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
FAM3D-201ENST00000358781 CASC2Q6XLA1 102 aa8.46□□□□□ -1.06
FAM3D-201ENST00000358781 FSIP2Q5CZC0 6907 aa8.44□□□□□ -1.06
FAM3D-201ENST00000358781 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
FAM3D-201ENST00000358781 Q5W150 140 aa8.4□□□□□ -1.06
FAM3D-201ENST00000358781 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
FAM3D-201ENST00000358781 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
FAM3D-201ENST00000358781 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
FAM3D-201ENST00000358781 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
FAM3D-201ENST00000358781 CXCL6P80162 114 aa8.34□□□□□ -1.07
FAM3D-201ENST00000358781 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
FAM3D-201ENST00000358781 MT2AP02795 61 aa8.3□□□□□ -1.08
FAM3D-201ENST00000358781 ACYP1P07311 99 aa8.28□□□□□ -1.08
FAM3D-201ENST00000358781 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
FAM3D-201ENST00000358781 H1FX-AS1Q4G0G2 97 aa8.25□□□□□ -1.09
FAM3D-201ENST00000358781 MT1FP04733 61 aa8.24□□□□□ -1.09
FAM3D-201ENST00000358781 TP53AIP1Q9HCN2 124 aa8.23□□□□□ -1.09
FAM3D-201ENST00000358781 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
FAM3D-201ENST00000358781 USH2AO75445 5202 aa8.19□□□□□ -1.1
FAM3D-201ENST00000358781 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
FAM3D-201ENST00000358781 A0A1B0GV90 55 aa8.18□□□□□ -1.1
FAM3D-201ENST00000358781 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
FAM3D-201ENST00000358781 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
FAM3D-201ENST00000358781 HIST1H4AP62805 103 aaKnown RBP8.1□□□□□ -1.11
FAM3D-201ENST00000358781 SSPOA2VEC9 5147 aa8.09□□□□□ -1.11
FAM3D-201ENST00000358781 LINC00643Q86TS7 51 aa8.08□□□□□ -1.12
FAM3D-201ENST00000358781 LCE2BO14633 110 aa8.07□□□□□ -1.12
FAM3D-201ENST00000358781 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
FAM3D-201ENST00000358781 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
FAM3D-201ENST00000358781 C1orf64Q8NEQ6 169 aa8.05□□□□□ -1.12
FAM3D-201ENST00000358781 CYP4F30PQ9H0H9 118 aa8.04□□□□□ -1.12
FAM3D-201ENST00000358781 A0A087WVE0 104 aa8.01□□□□□ -1.13
FAM3D-201ENST00000358781 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
FAM3D-201ENST00000358781 UQCRQO14949 82 aa8.01□□□□□ -1.13
FAM3D-201ENST00000358781 S4R3F8 94 aa7.99□□□□□ -1.13
FAM3D-201ENST00000358781 C5orf47Q569G3 176 aa7.98□□□□□ -1.13
FAM3D-201ENST00000358781 H0Y9P7 68 aa7.96□□□□□ -1.14
FAM3D-201ENST00000358781 J3QR89 54 aa7.96□□□□□ -1.14
FAM3D-201ENST00000358781 ATOX1O00244 68 aa7.95□□□□□ -1.14
FAM3D-201ENST00000358781 LCA10Q71F78 164 aa7.94□□□□□ -1.14
FAM3D-201ENST00000358781 CSAG1Q6PB30 78 aa7.91□□□□□ -1.14
FAM3D-201ENST00000358781 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
FAM3D-201ENST00000358781 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
FAM3D-201ENST00000358781 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
FAM3D-201ENST00000358781 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
FAM3D-201ENST00000358781 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
FAM3D-201ENST00000358781 LINC00208Q96KT6 92 aa7.83□□□□□ -1.16
FAM3D-201ENST00000358781 FAM236AA0A1B0GUQ0 79 aa7.82□□□□□ -1.16
FAM3D-201ENST00000358781 FAM236BA0A1B0GV22 79 aa7.82□□□□□ -1.16
FAM3D-201ENST00000358781 MP68P56378 58 aa7.81□□□□□ -1.16
FAM3D-201ENST00000358781 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms