RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
CCNE1-202ENST00000357943 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
CCNE1-202ENST00000357943 A0A1B0GW54 56 aa8.37□□□□□ -1.07
CCNE1-202ENST00000357943 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
CCNE1-202ENST00000357943 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
CCNE1-202ENST00000357943 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
CCNE1-202ENST00000357943 ASB16-AS1Q495Z4 193 aa8.36□□□□□ -1.07
CCNE1-202ENST00000357943 UBL5Q9BZL1 73 aa8.35□□□□□ -1.07
CCNE1-202ENST00000357943 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
CCNE1-202ENST00000357943 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
CCNE1-202ENST00000357943 TMEM258P61165 79 aa8.32□□□□□ -1.08
CCNE1-202ENST00000357943 Q6ZVQ6 151 aa8.32□□□□□ -1.08
CCNE1-202ENST00000357943 J3KT08 172 aa8.32□□□□□ -1.08
CCNE1-202ENST00000357943 Q96NJ1 140 aa8.3□□□□□ -1.08
CCNE1-202ENST00000357943 NREPQ16612 68 aa8.29□□□□□ -1.08
CCNE1-202ENST00000357943 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
CCNE1-202ENST00000357943 LINC00472Q9H8W2 130 aa8.27□□□□□ -1.09
CCNE1-202ENST00000357943 DEFB116Q30KQ4 102 aa8.26□□□□□ -1.09
CCNE1-202ENST00000357943 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
CCNE1-202ENST00000357943 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
CCNE1-202ENST00000357943 CXCL6P80162 114 aa8.23□□□□□ -1.09
CCNE1-202ENST00000357943 KRTAP13-3Q3SY46 172 aa8.23□□□□□ -1.09
CCNE1-202ENST00000357943 IGKV4-1P06312 121 aa8.22□□□□□ -1.09
CCNE1-202ENST00000357943 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CCNE1-202ENST00000357943 BPY2O14599 106 aa8.19□□□□□ -1.1
CCNE1-202ENST00000357943 TRAV7A0A075B6U4 112 aa8.18□□□□□ -1.1
CCNE1-202ENST00000357943 A0A087WVE0 104 aa8.18□□□□□ -1.1
CCNE1-202ENST00000357943 NDUFC1O43677 76 aa8.14□□□□□ -1.11
CCNE1-202ENST00000357943 DSCR10P59022 87 aa8.14□□□□□ -1.11
CCNE1-202ENST00000357943 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
CCNE1-202ENST00000357943 MUC17Q685J3 4493 aa8.13□□□□□ -1.11
CCNE1-202ENST00000357943 XP32Q5T750 250 aa8.12□□□□□ -1.11
CCNE1-202ENST00000357943 Q8N9L7 120 aa8.12□□□□□ -1.11
CCNE1-202ENST00000357943 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
CCNE1-202ENST00000357943 IGHV6-1A0A0B4J1U7 121 aa8.11□□□□□ -1.11
CCNE1-202ENST00000357943 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
CCNE1-202ENST00000357943 A8MWP4 228 aa8.1□□□□□ -1.11
CCNE1-202ENST00000357943 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
CCNE1-202ENST00000357943 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
CCNE1-202ENST00000357943 K7EQZ3 153 aa8.08□□□□□ -1.12
CCNE1-202ENST00000357943 NDUFB1O75438 58 aa8.08□□□□□ -1.12
CCNE1-202ENST00000357943 LINC00313P59037 77 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
CCNE1-202ENST00000357943 MUC2Q02817 5179 aa8.06□□□□□ -1.12
CCNE1-202ENST00000357943 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
CCNE1-202ENST00000357943 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
CCNE1-202ENST00000357943 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
CCNE1-202ENST00000357943 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
CCNE1-202ENST00000357943 H7BZZ5 65 aa8.02□□□□□ -1.13
CCNE1-202ENST00000357943 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
CCNE1-202ENST00000357943 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
CCNE1-202ENST00000357943 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
CCNE1-202ENST00000357943 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
CCNE1-202ENST00000357943 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
CCNE1-202ENST00000357943 HCG22E2RYF7 251 aa7.97□□□□□ -1.13
CCNE1-202ENST00000357943 Q75L30 129 aa7.97□□□□□ -1.13
CCNE1-202ENST00000357943 A8MUU9 505 aa7.96□□□□□ -1.13
CCNE1-202ENST00000357943 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
CCNE1-202ENST00000357943 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
CCNE1-202ENST00000357943 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
CCNE1-202ENST00000357943 hDV103S1A0JD37 113 aa7.92□□□□□ -1.14
CCNE1-202ENST00000357943 TMEM254Q8TBM7 123 aa7.92□□□□□ -1.14
CCNE1-202ENST00000357943 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
CCNE1-202ENST00000357943 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
CCNE1-202ENST00000357943 MRPL34Q9BQ48 92 aaKnown RBP7.9□□□□□ -1.14
CCNE1-202ENST00000357943 ATP11AUNQ6ZP68 121 aa7.89□□□□□ -1.15
CCNE1-202ENST00000357943 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
CCNE1-202ENST00000357943 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
CCNE1-202ENST00000357943 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
CCNE1-202ENST00000357943 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
CCNE1-202ENST00000357943 C4orf26Q17RF5 130 aa7.85□□□□□ -1.15
CCNE1-202ENST00000357943 NDUFS5O43920 106 aa7.83□□□□□ -1.16
CCNE1-202ENST00000357943 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
CCNE1-202ENST00000357943 PRO0628Q9UI54 55 aa7.8□□□□□ -1.16
CCNE1-202ENST00000357943 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
CCNE1-202ENST00000357943 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
CCNE1-202ENST00000357943 Q5W150 140 aa7.74□□□□□ -1.17
CCNE1-202ENST00000357943 H3BPC8 53 aa7.73□□□□□ -1.17
CCNE1-202ENST00000357943 CYP4F30PQ9H0H9 118 aa7.7□□□□□ -1.18
CCNE1-202ENST00000357943 MP68P56378 58 aa7.69□□□□□ -1.18
CCNE1-202ENST00000357943 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
CCNE1-202ENST00000357943 H0Y9P7 68 aa7.68□□□□□ -1.18
CCNE1-202ENST00000357943 V9GYY9 64 aa7.67□□□□□ -1.18
CCNE1-202ENST00000357943 SPINK7P58062 85 aa7.67□□□□□ -1.18
CCNE1-202ENST00000357943 Q1T7F1 81 aa7.66□□□□□ -1.18
CCNE1-202ENST00000357943 SPANXA2-OT1Q8N9U9 137 aa7.63□□□□□ -1.19
CCNE1-202ENST00000357943 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
CCNE1-202ENST00000357943 KRTAP19-2Q3LHN2 52 aa7.62□□□□□ -1.19
CCNE1-202ENST00000357943 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
CCNE1-202ENST00000357943 IGKV2-30P06310 120 aa7.6□□□□□ -1.19
CCNE1-202ENST00000357943 HRES1P13985 223 aa7.6□□□□□ -1.19
CCNE1-202ENST00000357943 C1orf64Q8NEQ6 169 aa7.6□□□□□ -1.19
CCNE1-202ENST00000357943 C7orf65Q6ZTY9 151 aa7.58□□□□□ -1.2
CCNE1-202ENST00000357943 MPLKIPQ8TAP9 179 aa7.57□□□□□ -1.2
CCNE1-202ENST00000357943 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
CCNE1-202ENST00000357943 BRK1Q8WUW1 75 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms