RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 A6NED7 52 aa10.48□□□□□ -0.73
RTN4-204ENST00000357732 HRES1P13985 223 aa10.47□□□□□ -0.73
RTN4-204ENST00000357732 CDC42SE1Q9NRR8 79 aa10.47□□□□□ -0.73
RTN4-204ENST00000357732 PRKDCP78527 4128 aaKnown RBP10.46□□□□□ -0.73
RTN4-204ENST00000357732 C8orf87E5RJ46 101 aa10.46□□□□□ -0.74
RTN4-204ENST00000357732 ANAPC11Q9NYG5 84 aa10.46□□□□□ -0.74
RTN4-204ENST00000357732 FRAS1Q86XX4 4008 aa10.45□□□□□ -0.74
RTN4-204ENST00000357732 SEC61GP60059 68 aa10.45□□□□□ -0.74
RTN4-204ENST00000357732 KRTAP13-3Q3SY46 172 aa10.45□□□□□ -0.74
RTN4-204ENST00000357732 A0A087X002 238 aa10.44□□□□□ -0.74
RTN4-204ENST00000357732 A8MU10 97 aa10.44□□□□□ -0.74
RTN4-204ENST00000357732 LCA10Q71F78 164 aa10.44□□□□□ -0.74
RTN4-204ENST00000357732 NOTCH2NLQ7Z3S9 236 aa10.44□□□□□ -0.74
RTN4-204ENST00000357732 SPAG11AQ6PDA7 123 aa10.44□□□□□ -0.74
RTN4-204ENST00000357732 KMT2AQ03164 3969 aa10.43□□□□□ -0.74
RTN4-204ENST00000357732 DNAH2Q9P225 4427 aa10.43□□□□□ -0.74
RTN4-204ENST00000357732 SSBP3-AS1Q7Z2R9 100 aa10.43□□□□□ -0.74
RTN4-204ENST00000357732 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
RTN4-204ENST00000357732 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
RTN4-204ENST00000357732 DNAH17Q9UFH2 4485 aa10.38□□□□□ -0.75
RTN4-204ENST00000357732 KTN1-AS1Q86SY8 53 aa10.37□□□□□ -0.75
RTN4-204ENST00000357732 ACYP2P14621 99 aa10.36□□□□□ -0.75
RTN4-204ENST00000357732 Q5W150 140 aa10.36□□□□□ -0.75
RTN4-204ENST00000357732 FBN3Q75N90 2809 aa10.36□□□□□ -0.75
RTN4-204ENST00000357732 SPINK6Q6UWN8 80 aa10.36□□□□□ -0.75
RTN4-204ENST00000357732 SPTSSBQ8NFR3 76 aa10.36□□□□□ -0.75
RTN4-204ENST00000357732 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
RTN4-204ENST00000357732 A6NN06 94 aa10.32□□□□□ -0.76
RTN4-204ENST00000357732 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
RTN4-204ENST00000357732 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
RTN4-204ENST00000357732 MEGF8Q7Z7M0 2845 aa10.31□□□□□ -0.76
RTN4-204ENST00000357732 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
RTN4-204ENST00000357732 LINC00313P59037 77 aa10.28□□□□□ -0.76
RTN4-204ENST00000357732 SPINK7P58062 85 aa10.25□□□□□ -0.77
RTN4-204ENST00000357732 TGP01266 2768 aa10.25□□□□□ -0.77
RTN4-204ENST00000357732 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
RTN4-204ENST00000357732 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
RTN4-204ENST00000357732 LY6G6CO95867 125 aa10.21□□□□□ -0.77
RTN4-204ENST00000357732 IGKV2-30P06310 120 aa10.21□□□□□ -0.78
RTN4-204ENST00000357732 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
RTN4-204ENST00000357732 C7orf65Q6ZTY9 151 aa10.17□□□□□ -0.78
RTN4-204ENST00000357732 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
RTN4-204ENST00000357732 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
RTN4-204ENST00000357732 KRTAP21-3Q3LHN1 58 aa10.15□□□□□ -0.79
RTN4-204ENST00000357732 DNAH5Q8TE73 4624 aa10.15□□□□□ -0.79
RTN4-204ENST00000357732 DNHD1Q96M86 4753 aa10.14□□□□□ -0.79
RTN4-204ENST00000357732 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
RTN4-204ENST00000357732 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
RTN4-204ENST00000357732 Q6ZSA8 131 aa10.1□□□□□ -0.79
RTN4-204ENST00000357732 A0A1B0GU69 56 aa10.09□□□□□ -0.79
RTN4-204ENST00000357732 RBM12B-AS1Q9P1G2 102 aa10.08□□□□□ -0.8
RTN4-204ENST00000357732 SPATA8Q6RVD6 105 aa10.03□□□□□ -0.8
RTN4-204ENST00000357732 KRTAP10-1P60331 282 aa10.02□□□□□ -0.8
RTN4-204ENST00000357732 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.81
RTN4-204ENST00000357732 RETNLBQ9BQ08 111 aa10.01□□□□□ -0.81
RTN4-204ENST00000357732 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
RTN4-204ENST00000357732 PKD1P98161 4303 aa10.01□□□□□ -0.81
RTN4-204ENST00000357732 IGKV2D-30A0A075B6S6 120 aa9.98□□□□□ -0.81
RTN4-204ENST00000357732 UQCR11O14957 56 aa9.98□□□□□ -0.81
RTN4-204ENST00000357732 SPINK1P00995 79 aa9.97□□□□□ -0.81
RTN4-204ENST00000357732 C4orf48Q5BLP8 95 aa9.97□□□□□ -0.81
RTN4-204ENST00000357732 HYDINQ4G0P3 5121 aa9.95□□□□□ -0.82
RTN4-204ENST00000357732 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
RTN4-204ENST00000357732 MIR22HGQ0VDD5 57 aa9.93□□□□□ -0.82
RTN4-204ENST00000357732 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
RTN4-204ENST00000357732 PLA2G1BP04054 148 aaKnown RBP9.91□□□□□ -0.82
RTN4-204ENST00000357732 TYMSOSQ8TAI1 123 aa9.9□□□□□ -0.82
RTN4-204ENST00000357732 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
RTN4-204ENST00000357732 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
RTN4-204ENST00000357732 PRAC1Q96KF2 57 aa9.7□□□□□ -0.86
RTN4-204ENST00000357732 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
RTN4-204ENST00000357732 Q8N1X5 172 aa9.69□□□□□ -0.86
RTN4-204ENST00000357732 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
RTN4-204ENST00000357732 A8MUU9 505 aa9.67□□□□□ -0.86
RTN4-204ENST00000357732 ADM2Q7Z4H4 148 aa9.65□□□□□ -0.86
RTN4-204ENST00000357732 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
RTN4-204ENST00000357732 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
RTN4-204ENST00000357732 SACSQ9NZJ4 4579 aa9.59□□□□□ -0.87
RTN4-204ENST00000357732 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
RTN4-204ENST00000357732 H0YAA0 97 aa9.52□□□□□ -0.89
RTN4-204ENST00000357732 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
RTN4-204ENST00000357732 A0A1B0GU33 70 aa9.5□□□□□ -0.89
RTN4-204ENST00000357732 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
RTN4-204ENST00000357732 CSAG1Q6PB30 78 aa9.47□□□□□ -0.89
RTN4-204ENST00000357732 FAT1Q14517 4588 aa9.47□□□□□ -0.89
RTN4-204ENST00000357732 H1FX-AS1Q4G0G2 97 aa9.46□□□□□ -0.89
RTN4-204ENST00000357732 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
RTN4-204ENST00000357732 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
RTN4-204ENST00000357732 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
RTN4-204ENST00000357732 A0A1B0GVY2 172 aa9.43□□□□□ -0.9
RTN4-204ENST00000357732 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
RTN4-204ENST00000357732 K7ERS5 55 aa9.32□□□□□ -0.92
RTN4-204ENST00000357732 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
RTN4-204ENST00000357732 RYR2Q92736 4967 aa9.25□□□□□ -0.93
RTN4-204ENST00000357732 FLG2Q5D862 2391 aaPredicted RBP9.18□□□□□ -0.94
RTN4-204ENST00000357732 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
RTN4-204ENST00000357732 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.95
RTN4-204ENST00000357732 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
RTN4-204ENST00000357732 LRP1Q07954 4544 aaKnown RBP9.13□□□□□ -0.95
RTN4-204ENST00000357732 TNXBP22105 4242 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms