RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
RNF38-204ENST00000357058 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
RNF38-204ENST00000357058 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
RNF38-204ENST00000357058 Q5XG85 94 aa11.64□□□□□ -0.55
RNF38-204ENST00000357058 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
RNF38-204ENST00000357058 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
RNF38-204ENST00000357058 KRTAP13-2Q52LG2 175 aa11.63□□□□□ -0.55
RNF38-204ENST00000357058 ASB16-AS1Q495Z4 193 aa11.62□□□□□ -0.55
RNF38-204ENST00000357058 LINC01558Q9Y6Z2 57 aa11.61□□□□□ -0.55
RNF38-204ENST00000357058 A0A0D9SG42 100 aa11.6□□□□□ -0.55
RNF38-204ENST00000357058 TENM3Q9P273 2699 aa11.6□□□□□ -0.55
RNF38-204ENST00000357058 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
RNF38-204ENST00000357058 Q75L30 129 aa11.58□□□□□ -0.56
RNF38-204ENST00000357058 OTOGQ6ZRI0 2925 aa11.58□□□□□ -0.56
RNF38-204ENST00000357058 OXTP01178 125 aa11.58□□□□□ -0.56
RNF38-204ENST00000357058 LINC01554Q52M75 96 aa11.55□□□□□ -0.56
RNF38-204ENST00000357058 SPENQ96T58 3664 aaKnown RBP11.54□□□□□ -0.56
RNF38-204ENST00000357058 A0A1B0GU33 70 aa11.52□□□□□ -0.56
RNF38-204ENST00000357058 SPINT4Q6UDR6 99 aa11.51□□□□□ -0.57
RNF38-204ENST00000357058 DMAC1Q96GE9 116 aa11.51□□□□□ -0.57
RNF38-204ENST00000357058 RPS29P62273 56 aaKnown RBP11.51□□□□□ -0.57
RNF38-204ENST00000357058 BSNQ9UPA5 3926 aa11.5□□□□□ -0.57
RNF38-204ENST00000357058 S4R3F8 94 aa11.5□□□□□ -0.57
RNF38-204ENST00000357058 DMBT1Q9UGM3 2413 aaPredicted RBP11.48□□□□□ -0.57
RNF38-204ENST00000357058 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
RNF38-204ENST00000357058 Q5VV11 94 aa11.46□□□□□ -0.57
RNF38-204ENST00000357058 SEC61BP60468 96 aaKnown RBP11.45□□□□□ -0.58
RNF38-204ENST00000357058 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
RNF38-204ENST00000357058 KTN1-AS1Q86SY8 53 aa11.42□□□□□ -0.58
RNF38-204ENST00000357058 CRIPTQ9P021 101 aa11.39□□□□□ -0.59
RNF38-204ENST00000357058 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
RNF38-204ENST00000357058 VWFP04275 2813 aa11.38□□□□□ -0.59
RNF38-204ENST00000357058 M0R2T5 61 aa11.29□□□□□ -0.6
RNF38-204ENST00000357058 FBN1P35555 2871 aaKnown RBP11.28□□□□□ -0.6
RNF38-204ENST00000357058 TENM2Q9NT68 2774 aa11.27□□□□□ -0.61
RNF38-204ENST00000357058 ZFHX3Q15911 3703 aa11.27□□□□□ -0.61
RNF38-204ENST00000357058 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
RNF38-204ENST00000357058 KRTAP1-4P0C5Y4 121 aa11.26□□□□□ -0.61
RNF38-204ENST00000357058 LCA10Q71F78 164 aa11.23□□□□□ -0.61
RNF38-204ENST00000357058 FLG2Q5D862 2391 aaPredicted RBP11.22□□□□□ -0.61
RNF38-204ENST00000357058 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
RNF38-204ENST00000357058 R4GN34 69 aa11.12□□□□□ -0.63
RNF38-204ENST00000357058 H1FX-AS1Q4G0G2 97 aa11.11□□□□□ -0.63
RNF38-204ENST00000357058 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
RNF38-204ENST00000357058 PKD1L1Q8TDX9 2849 aa11.09□□□□□ -0.63
RNF38-204ENST00000357058 A8MUU9 505 aa11.06□□□□□ -0.64
RNF38-204ENST00000357058 TGP01266 2768 aa11.04□□□□□ -0.64
RNF38-204ENST00000357058 C20orf166-AS1Q96NR2 134 aa11.03□□□□□ -0.64
RNF38-204ENST00000357058 ADM2Q7Z4H4 148 aa11.02□□□□□ -0.65
RNF38-204ENST00000357058 SPATA8Q6RVD6 105 aa11□□□□□ -0.65
RNF38-204ENST00000357058 PRAC1Q96KF2 57 aa10.98□□□□□ -0.65
RNF38-204ENST00000357058 TRRAPQ9Y4A5 3859 aa10.98□□□□□ -0.65
RNF38-204ENST00000357058 CUBNO60494 3623 aa10.98□□□□□ -0.65
RNF38-204ENST00000357058 M0QZ58 72 aa10.97□□□□□ -0.65
RNF38-204ENST00000357058 LUZP6Q538Z0 58 aa10.91□□□□□ -0.66
RNF38-204ENST00000357058 A0A1B0GVY2 172 aa10.89□□□□□ -0.67
RNF38-204ENST00000357058 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
RNF38-204ENST00000357058 XP32Q5T750 250 aa10.83□□□□□ -0.68
RNF38-204ENST00000357058 ROMO1P60602 79 aa10.79□□□□□ -0.68
RNF38-204ENST00000357058 A8MU10 97 aa10.74□□□□□ -0.69
RNF38-204ENST00000357058 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
RNF38-204ENST00000357058 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
RNF38-204ENST00000357058 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
RNF38-204ENST00000357058 A6NN06 94 aa10.6□□□□□ -0.71
RNF38-204ENST00000357058 KRTAP13-3Q3SY46 172 aa10.6□□□□□ -0.71
RNF38-204ENST00000357058 ZNF469Q96JG9 3925 aaPredicted RBP10.59□□□□□ -0.71
RNF38-204ENST00000357058 PLAC4Q8WY50 150 aa10.57□□□□□ -0.72
RNF38-204ENST00000357058 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
RNF38-204ENST00000357058 AKAP9Q99996 3911 aa10.49□□□□□ -0.73
RNF38-204ENST00000357058 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
RNF38-204ENST00000357058 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
RNF38-204ENST00000357058 A0A0A0MQY5 61 aa10.41□□□□□ -0.74
RNF38-204ENST00000357058 KRTAP25-1Q3LHN0 102 aa10.31□□□□□ -0.76
RNF38-204ENST00000357058 H0YAA0 97 aa10.27□□□□□ -0.77
RNF38-204ENST00000357058 H3BS24 57 aa10.26□□□□□ -0.77
RNF38-204ENST00000357058 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
RNF38-204ENST00000357058 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
RNF38-204ENST00000357058 COL7A1Q02388 2944 aa10.16□□□□□ -0.78
RNF38-204ENST00000357058 P0C880 135 aa10.16□□□□□ -0.78
RNF38-204ENST00000357058 TNP1P09430 55 aa10.05□□□□□ -0.8
RNF38-204ENST00000357058 KRTAP3-1Q9BYR8 98 aa10.03□□□□□ -0.8
RNF38-204ENST00000357058 KRTAP10-4P60372 401 aaPredicted RBP9.99□□□□□ -0.81
RNF38-204ENST00000357058 ALMS1Q8TCU4 4167 aa9.99□□□□□ -0.81
RNF38-204ENST00000357058 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
RNF38-204ENST00000357058 KRTAP10-10P60014 251 aa9.94□□□□□ -0.82
RNF38-204ENST00000357058 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
RNF38-204ENST00000357058 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
RNF38-204ENST00000357058 CSMD3Q7Z407 3707 aa9.87□□□□□ -0.83
RNF38-204ENST00000357058 DNAH1Q9P2D7 4330 aa9.81□□□□□ -0.84
RNF38-204ENST00000357058 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
RNF38-204ENST00000357058 PP632Q6XCG6 107 aa9.75□□□□□ -0.85
RNF38-204ENST00000357058 DNHD1Q96M86 4753 aa9.71□□□□□ -0.85
RNF38-204ENST00000357058 KRTAP12-2P59991 146 aa9.7□□□□□ -0.86
RNF38-204ENST00000357058 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
RNF38-204ENST00000357058 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
RNF38-204ENST00000357058 DNAH10Q8IVF4 4471 aa9.63□□□□□ -0.87
RNF38-204ENST00000357058 DNAH11Q96DT5 4516 aa9.6□□□□□ -0.87
RNF38-204ENST00000357058 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.87
RNF38-204ENST00000357058 NDUFAF8A1L188 74 aa9.59□□□□□ -0.87
RNF38-204ENST00000357058 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms