RNA–Protein interactions for RNA: ENST00000355192.7

MSRB3-202, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 1 (best) BASIC

Gene MSRB3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-202ENST00000355192 LINC00483Q53H64 154 aa8.31□□□□□ -1.08
MSRB3-202ENST00000355192 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
MSRB3-202ENST00000355192 A0A087X002 238 aa8.29□□□□□ -1.08
MSRB3-202ENST00000355192 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
MSRB3-202ENST00000355192 A8MU10 97 aa8.26□□□□□ -1.09
MSRB3-202ENST00000355192 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
MSRB3-202ENST00000355192 TENM3Q9P273 2699 aa8.24□□□□□ -1.09
MSRB3-202ENST00000355192 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
MSRB3-202ENST00000355192 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
MSRB3-202ENST00000355192 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
MSRB3-202ENST00000355192 A0A1B0GU33 70 aa8.2□□□□□ -1.1
MSRB3-202ENST00000355192 CUBNO60494 3623 aa8.17□□□□□ -1.1
MSRB3-202ENST00000355192 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
MSRB3-202ENST00000355192 A0A0D9SG42 100 aa8.16□□□□□ -1.1
MSRB3-202ENST00000355192 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
MSRB3-202ENST00000355192 TENM1Q9UKZ4 2725 aa8.13□□□□□ -1.11
MSRB3-202ENST00000355192 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
MSRB3-202ENST00000355192 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
MSRB3-202ENST00000355192 VWFP04275 2813 aa8.12□□□□□ -1.11
MSRB3-202ENST00000355192 A6NN06 94 aa8.12□□□□□ -1.11
MSRB3-202ENST00000355192 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
MSRB3-202ENST00000355192 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
MSRB3-202ENST00000355192 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
MSRB3-202ENST00000355192 PDZD2O15018 2839 aa8.06□□□□□ -1.12
MSRB3-202ENST00000355192 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
MSRB3-202ENST00000355192 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
MSRB3-202ENST00000355192 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
MSRB3-202ENST00000355192 ZFHX3Q15911 3703 aa8.01□□□□□ -1.13
MSRB3-202ENST00000355192 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.14
MSRB3-202ENST00000355192 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
MSRB3-202ENST00000355192 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
MSRB3-202ENST00000355192 PKD1L1Q8TDX9 2849 aa7.91□□□□□ -1.14
MSRB3-202ENST00000355192 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
MSRB3-202ENST00000355192 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
MSRB3-202ENST00000355192 BSNQ9UPA5 3926 aa7.87□□□□□ -1.15
MSRB3-202ENST00000355192 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
MSRB3-202ENST00000355192 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
MSRB3-202ENST00000355192 S4R3F8 94 aa7.83□□□□□ -1.16
MSRB3-202ENST00000355192 CSMD2Q7Z408 3487 aa7.83□□□□□ -1.16
MSRB3-202ENST00000355192 Q6ZSA8 131 aa7.8□□□□□ -1.16
MSRB3-202ENST00000355192 TGP01266 2768 aa7.8□□□□□ -1.16
MSRB3-202ENST00000355192 ROMO1P60602 79 aa7.79□□□□□ -1.16
MSRB3-202ENST00000355192 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
MSRB3-202ENST00000355192 TENM2Q9NT68 2774 aa7.73□□□□□ -1.17
MSRB3-202ENST00000355192 J3QL48 77 aa7.72□□□□□ -1.17
MSRB3-202ENST00000355192 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
MSRB3-202ENST00000355192 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
MSRB3-202ENST00000355192 KRTAP1-4P0C5Y4 121 aa7.65□□□□□ -1.18
MSRB3-202ENST00000355192 SRRM2Q9UQ35 2752 aaKnown RBP7.64□□□□□ -1.19
MSRB3-202ENST00000355192 Q5VSD8 79 aa7.64□□□□□ -1.19
MSRB3-202ENST00000355192 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
MSRB3-202ENST00000355192 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
MSRB3-202ENST00000355192 R4GN34 69 aa7.61□□□□□ -1.19
MSRB3-202ENST00000355192 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
MSRB3-202ENST00000355192 A8MUU9 505 aa7.6□□□□□ -1.19
MSRB3-202ENST00000355192 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
MSRB3-202ENST00000355192 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
MSRB3-202ENST00000355192 LUZP6Q538Z0 58 aa7.57□□□□□ -1.2
MSRB3-202ENST00000355192 ANK3Q12955 4377 aaKnown RBP7.55□□□□□ -1.2
MSRB3-202ENST00000355192 M0QZ58 72 aa7.54□□□□□ -1.2
MSRB3-202ENST00000355192 H0YAA0 97 aa7.53□□□□□ -1.2
MSRB3-202ENST00000355192 FBN3Q75N90 2809 aa7.52□□□□□ -1.21
MSRB3-202ENST00000355192 VPS13CQ709C8 3753 aa7.52□□□□□ -1.21
MSRB3-202ENST00000355192 AKAP9Q99996 3911 aa7.48□□□□□ -1.21
MSRB3-202ENST00000355192 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
MSRB3-202ENST00000355192 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
MSRB3-202ENST00000355192 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
MSRB3-202ENST00000355192 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
MSRB3-202ENST00000355192 ZNF469Q96JG9 3925 aaPredicted RBP7.31□□□□□ -1.24
MSRB3-202ENST00000355192 A0A0A0MQY5 61 aa7.27□□□□□ -1.24
MSRB3-202ENST00000355192 XP32Q5T750 250 aa7.27□□□□□ -1.25
MSRB3-202ENST00000355192 M0R2T5 61 aa7.23□□□□□ -1.25
MSRB3-202ENST00000355192 COL7A1Q02388 2944 aa7.23□□□□□ -1.25
MSRB3-202ENST00000355192 P0C880 135 aa7.2□□□□□ -1.26
MSRB3-202ENST00000355192 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
MSRB3-202ENST00000355192 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
MSRB3-202ENST00000355192 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
MSRB3-202ENST00000355192 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
MSRB3-202ENST00000355192 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
MSRB3-202ENST00000355192 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
MSRB3-202ENST00000355192 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
MSRB3-202ENST00000355192 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
MSRB3-202ENST00000355192 A0A1B0GVY2 172 aa6.99□□□□□ -1.29
MSRB3-202ENST00000355192 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
MSRB3-202ENST00000355192 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
MSRB3-202ENST00000355192 TNP1P09430 55 aa6.94□□□□□ -1.3
MSRB3-202ENST00000355192 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
MSRB3-202ENST00000355192 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
MSRB3-202ENST00000355192 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
MSRB3-202ENST00000355192 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
MSRB3-202ENST00000355192 CMYA5Q8N3K9 4069 aa6.76□□□□□ -1.33
MSRB3-202ENST00000355192 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
MSRB3-202ENST00000355192 ANK2Q01484 3957 aa6.74□□□□□ -1.33
MSRB3-202ENST00000355192 LCE2DQ5TA82 110 aaPredicted RBP6.73□□□□□ -1.33
MSRB3-202ENST00000355192 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
MSRB3-202ENST00000355192 DNAH3Q8TD57 4116 aa6.72□□□□□ -1.33
MSRB3-202ENST00000355192 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
MSRB3-202ENST00000355192 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
MSRB3-202ENST00000355192 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.35
MSRB3-202ENST00000355192 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms