RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
PRPF40A-201ENST00000354363 K7ERJ3 54 aa7.13□□□□□ -1.27
PRPF40A-201ENST00000354363 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
PRPF40A-201ENST00000354363 COX6CP09669 75 aa7.12□□□□□ -1.27
PRPF40A-201ENST00000354363 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
PRPF40A-201ENST00000354363 C8orf87E5RJ46 101 aa7.11□□□□□ -1.27
PRPF40A-201ENST00000354363 HSD52Q0P140 79 aa7.11□□□□□ -1.27
PRPF40A-201ENST00000354363 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
PRPF40A-201ENST00000354363 VPS25Q9BRG1 176 aa7.09□□□□□ -1.28
PRPF40A-201ENST00000354363 MTURNQ8N3F0 131 aa7.07□□□□□ -1.28
PRPF40A-201ENST00000354363 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
PRPF40A-201ENST00000354363 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
PRPF40A-201ENST00000354363 SPINK7P58062 85 aa7.04□□□□□ -1.28
PRPF40A-201ENST00000354363 PYY3Q5JQD4 70 aa7.04□□□□□ -1.28
PRPF40A-201ENST00000354363 DSCR8Q96T75 97 aa7.04□□□□□ -1.28
PRPF40A-201ENST00000354363 J3KT08 172 aa7.02□□□□□ -1.29
PRPF40A-201ENST00000354363 SCGB1C2P0DMR2 95 aa7.01□□□□□ -1.29
PRPF40A-201ENST00000354363 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
PRPF40A-201ENST00000354363 C9JAW5 83 aa6.99□□□□□ -1.29
PRPF40A-201ENST00000354363 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
PRPF40A-201ENST00000354363 Q6ZQT0 140 aa6.99□□□□□ -1.29
PRPF40A-201ENST00000354363 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
PRPF40A-201ENST00000354363 UQCR10Q9UDW1 63 aa6.98□□□□□ -1.29
PRPF40A-201ENST00000354363 NDUFB1O75438 58 aa6.97□□□□□ -1.29
PRPF40A-201ENST00000354363 WFDC13Q8IUB5 93 aa6.95□□□□□ -1.3
PRPF40A-201ENST00000354363 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
PRPF40A-201ENST00000354363 A8MWP4 228 aa6.94□□□□□ -1.3
PRPF40A-201ENST00000354363 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
PRPF40A-201ENST00000354363 LINC00846Q9NV44 126 aa6.93□□□□□ -1.3
PRPF40A-201ENST00000354363 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
PRPF40A-201ENST00000354363 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
PRPF40A-201ENST00000354363 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.31
PRPF40A-201ENST00000354363 A0A1B0GW54 56 aa6.89□□□□□ -1.31
PRPF40A-201ENST00000354363 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
PRPF40A-201ENST00000354363 Q6ZVQ6 151 aa6.89□□□□□ -1.31
PRPF40A-201ENST00000354363 LOC110117498A0A087WWA1 95 aa6.88□□□□□ -1.31
PRPF40A-201ENST00000354363 ATXN8Q156A1 80 aa6.86□□□□□ -1.31
PRPF40A-201ENST00000354363 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
PRPF40A-201ENST00000354363 PDE6GP18545 87 aa6.84□□□□□ -1.31
PRPF40A-201ENST00000354363 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
PRPF40A-201ENST00000354363 C14orf132Q9NPU4 83 aa6.83□□□□□ -1.32
PRPF40A-201ENST00000354363 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
PRPF40A-201ENST00000354363 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
PRPF40A-201ENST00000354363 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
PRPF40A-201ENST00000354363 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
PRPF40A-201ENST00000354363 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
PRPF40A-201ENST00000354363 NREPQ16612 68 aa6.8□□□□□ -1.32
PRPF40A-201ENST00000354363 TMA7Q9Y2S6 64 aaKnown RBP6.8□□□□□ -1.32
PRPF40A-201ENST00000354363 M0R143 59 aa6.78□□□□□ -1.32
PRPF40A-201ENST00000354363 hDV103S1A0JD37 113 aa6.76□□□□□ -1.33
PRPF40A-201ENST00000354363 NDUFS5O43920 106 aa6.76□□□□□ -1.33
PRPF40A-201ENST00000354363 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
PRPF40A-201ENST00000354363 K7EQZ3 153 aa6.75□□□□□ -1.33
PRPF40A-201ENST00000354363 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
PRPF40A-201ENST00000354363 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
PRPF40A-201ENST00000354363 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
PRPF40A-201ENST00000354363 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
PRPF40A-201ENST00000354363 Q5W150 140 aa6.71□□□□□ -1.34
PRPF40A-201ENST00000354363 C7orf65Q6ZTY9 151 aa6.71□□□□□ -1.34
PRPF40A-201ENST00000354363 BPY2O14599 106 aa6.66□□□□□ -1.34
PRPF40A-201ENST00000354363 H3BT86 120 aa6.64□□□□□ -1.35
PRPF40A-201ENST00000354363 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
PRPF40A-201ENST00000354363 HCG22E2RYF7 251 aa6.61□□□□□ -1.35
PRPF40A-201ENST00000354363 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
PRPF40A-201ENST00000354363 Q8N9L7 120 aa6.61□□□□□ -1.35
PRPF40A-201ENST00000354363 BATFQ16520 125 aa6.61□□□□□ -1.35
PRPF40A-201ENST00000354363 C5orf47Q569G3 176 aa6.58□□□□□ -1.36
PRPF40A-201ENST00000354363 C9orf118A6NHY6 69 aa6.58□□□□□ -1.36
PRPF40A-201ENST00000354363 SMIM6P0DI80 62 aa6.58□□□□□ -1.36
PRPF40A-201ENST00000354363 CXCL6P80162 114 aa6.57□□□□□ -1.36
PRPF40A-201ENST00000354363 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
PRPF40A-201ENST00000354363 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
PRPF40A-201ENST00000354363 TSTD3H0UI37 97 aa6.56□□□□□ -1.36
PRPF40A-201ENST00000354363 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
PRPF40A-201ENST00000354363 MT1BP07438 61 aa6.55□□□□□ -1.36
PRPF40A-201ENST00000354363 TAX1BP3O14907 124 aa6.54□□□□□ -1.36
PRPF40A-201ENST00000354363 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
PRPF40A-201ENST00000354363 A6NN06 94 aa6.54□□□□□ -1.36
PRPF40A-201ENST00000354363 S4R3F8 94 aa6.52□□□□□ -1.37
PRPF40A-201ENST00000354363 Q5VV11 94 aa6.51□□□□□ -1.37
PRPF40A-201ENST00000354363 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
PRPF40A-201ENST00000354363 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
PRPF40A-201ENST00000354363 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
PRPF40A-201ENST00000354363 LCA10Q71F78 164 aa6.48□□□□□ -1.37
PRPF40A-201ENST00000354363 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
PRPF40A-201ENST00000354363 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
PRPF40A-201ENST00000354363 NEBP20929 6669 aa6.45□□□□□ -1.38
PRPF40A-201ENST00000354363 UBL5Q9BZL1 73 aa6.44□□□□□ -1.38
PRPF40A-201ENST00000354363 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
PRPF40A-201ENST00000354363 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
PRPF40A-201ENST00000354363 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
PRPF40A-201ENST00000354363 TP53AIP1Q9HCN2 124 aa6.38□□□□□ -1.39
PRPF40A-201ENST00000354363 PRO0461Q9UI25 63 aa6.38□□□□□ -1.39
PRPF40A-201ENST00000354363 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
PRPF40A-201ENST00000354363 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
PRPF40A-201ENST00000354363 LOC105371267A0A1B0GV96 52 aa6.31□□□□□ -1.4
PRPF40A-201ENST00000354363 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
PRPF40A-201ENST00000354363 A0A087WVE0 104 aa6.3□□□□□ -1.4
PRPF40A-201ENST00000354363 K7EP34 96 aa6.29□□□□□ -1.4
PRPF40A-201ENST00000354363 CRIPTQ9P021 101 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms