RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 A8MUN3 132 aa5.18□□□□□ -1.58
TRIM55-204ENST00000353317 Q6ZSA8 131 aa5.18□□□□□ -1.58
TRIM55-204ENST00000353317 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
TRIM55-204ENST00000353317 PSORS1C2Q9UIG4 136 aa5.17□□□□□ -1.58
TRIM55-204ENST00000353317 Q96NJ1 140 aa5.15□□□□□ -1.58
TRIM55-204ENST00000353317 V9GYY9 64 aa5.15□□□□□ -1.58
TRIM55-204ENST00000353317 APOBP04114 4563 aaKnown RBP5.15□□□□□ -1.58
TRIM55-204ENST00000353317 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.59
TRIM55-204ENST00000353317 Q5VV11 94 aa5.15□□□□□ -1.59
TRIM55-204ENST00000353317 Q8N9P0 234 aaPredicted RBP5.15□□□□□ -1.59
TRIM55-204ENST00000353317 A8MU10 97 aa5.13□□□□□ -1.59
TRIM55-204ENST00000353317 FAT1Q14517 4588 aa5.13□□□□□ -1.59
TRIM55-204ENST00000353317 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
TRIM55-204ENST00000353317 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
TRIM55-204ENST00000353317 MOBPQ13875 183 aa5.11□□□□□ -1.59
TRIM55-204ENST00000353317 PCOTHQ58A44 107 aa5.11□□□□□ -1.59
TRIM55-204ENST00000353317 COA5Q86WW8 74 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 CD164Q04900 197 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 LINC00483Q53H64 154 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 C8orf17Q9NRJ1 99 aa5.1□□□□□ -1.59
TRIM55-204ENST00000353317 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
TRIM55-204ENST00000353317 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
TRIM55-204ENST00000353317 EPPK1P58107 5090 aaKnown RBP5.09□□□□□ -1.6
TRIM55-204ENST00000353317 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.6
TRIM55-204ENST00000353317 IGLV7-43P04211 117 aa5.08□□□□□ -1.6
TRIM55-204ENST00000353317 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
TRIM55-204ENST00000353317 A0A1B0GVX0 72 aa5.07□□□□□ -1.6
TRIM55-204ENST00000353317 NDUFS5O43920 106 aa5.07□□□□□ -1.6
TRIM55-204ENST00000353317 ZNF861PO60384 105 aa5.07□□□□□ -1.6
TRIM55-204ENST00000353317 A0A087X002 238 aa5.07□□□□□ -1.6
TRIM55-204ENST00000353317 SMR3BP02814 79 aaPredicted RBP5.07□□□□□ -1.6
TRIM55-204ENST00000353317 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
TRIM55-204ENST00000353317 LOC101927531A0A1B0GV80 90 aa5.05□□□□□ -1.6
TRIM55-204ENST00000353317 HSPG2P98160 4391 aa5.05□□□□□ -1.6
TRIM55-204ENST00000353317 Q75L30 129 aa5.05□□□□□ -1.6
TRIM55-204ENST00000353317 MRPL34Q9BQ48 92 aaKnown RBP5.05□□□□□ -1.6
TRIM55-204ENST00000353317 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
TRIM55-204ENST00000353317 LCA10Q71F78 164 aa5.04□□□□□ -1.6
TRIM55-204ENST00000353317 ZNF706Q9Y5V0 76 aaPredicted RBP5.04□□□□□ -1.6
TRIM55-204ENST00000353317 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
TRIM55-204ENST00000353317 CDK2AP2O75956 126 aa5.03□□□□□ -1.6
TRIM55-204ENST00000353317 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
TRIM55-204ENST00000353317 A6NED7 52 aa5.02□□□□□ -1.61
TRIM55-204ENST00000353317 HRES1P13985 223 aa5.02□□□□□ -1.61
TRIM55-204ENST00000353317 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
TRIM55-204ENST00000353317 SEC61GP60059 68 aa5.01□□□□□ -1.61
TRIM55-204ENST00000353317 RYR1P21817 5038 aa5.01□□□□□ -1.61
TRIM55-204ENST00000353317 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
TRIM55-204ENST00000353317 Q5W150 140 aa5□□□□□ -1.61
TRIM55-204ENST00000353317 SPINK6Q6UWN8 80 aa5□□□□□ -1.61
TRIM55-204ENST00000353317 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
TRIM55-204ENST00000353317 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
TRIM55-204ENST00000353317 KRTAP13-3Q3SY46 172 aa4.98□□□□□ -1.61
TRIM55-204ENST00000353317 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
TRIM55-204ENST00000353317 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
TRIM55-204ENST00000353317 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.61
TRIM55-204ENST00000353317 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.62
TRIM55-204ENST00000353317 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
TRIM55-204ENST00000353317 SPINK7P58062 85 aa4.95□□□□□ -1.62
TRIM55-204ENST00000353317 PRR26Q8N8Z3 221 aa4.95□□□□□ -1.62
TRIM55-204ENST00000353317 A6NN06 94 aa4.93□□□□□ -1.62
TRIM55-204ENST00000353317 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
TRIM55-204ENST00000353317 FLG2Q5D862 2391 aaPredicted RBP4.92□□□□□ -1.62
TRIM55-204ENST00000353317 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
TRIM55-204ENST00000353317 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
TRIM55-204ENST00000353317 ACYP2P14621 99 aa4.9□□□□□ -1.63
TRIM55-204ENST00000353317 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.63
TRIM55-204ENST00000353317 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
TRIM55-204ENST00000353317 LINC00313P59037 77 aa4.88□□□□□ -1.63
TRIM55-204ENST00000353317 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
TRIM55-204ENST00000353317 TNXBP22105 4242 aa4.88□□□□□ -1.63
TRIM55-204ENST00000353317 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
TRIM55-204ENST00000353317 Q5VSD8 79 aa4.87□□□□□ -1.63
TRIM55-204ENST00000353317 FAM229AH3BQW9 127 aa4.86□□□□□ -1.63
TRIM55-204ENST00000353317 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
TRIM55-204ENST00000353317 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
TRIM55-204ENST00000353317 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
TRIM55-204ENST00000353317 IGKV2-30P06310 120 aa4.84□□□□□ -1.63
TRIM55-204ENST00000353317 TYMSOSQ8TAI1 123 aa4.84□□□□□ -1.63
TRIM55-204ENST00000353317 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
TRIM55-204ENST00000353317 C7orf65Q6ZTY9 151 aa4.83□□□□□ -1.64
TRIM55-204ENST00000353317 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
TRIM55-204ENST00000353317 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
TRIM55-204ENST00000353317 A0A1B0GU69 56 aa4.8□□□□□ -1.64
TRIM55-204ENST00000353317 Q8N1X5 172 aa4.8□□□□□ -1.64
TRIM55-204ENST00000353317 ABCA13Q86UQ4 5058 aa4.79□□□□□ -1.64
TRIM55-204ENST00000353317 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
TRIM55-204ENST00000353317 LINC00304Q8N9R0 145 aa4.77□□□□□ -1.65
TRIM55-204ENST00000353317 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
TRIM55-204ENST00000353317 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
TRIM55-204ENST00000353317 SPINK1P00995 79 aa4.75□□□□□ -1.65
TRIM55-204ENST00000353317 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
TRIM55-204ENST00000353317 HERC2O95714 4834 aa4.74□□□□□ -1.65
TRIM55-204ENST00000353317 C4orf48Q5BLP8 95 aa4.74□□□□□ -1.65
TRIM55-204ENST00000353317 UQCR11O14957 56 aa4.73□□□□□ -1.65
TRIM55-204ENST00000353317 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
TRIM55-204ENST00000353317 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms