RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
SLC6A20-201ENST00000353278 A0A087X002 238 aa6.6□□□□□ -1.35
SLC6A20-201ENST00000353278 LCA10Q71F78 164 aa6.59□□□□□ -1.35
SLC6A20-201ENST00000353278 CELSR2Q9HCU4 2923 aa6.57□□□□□ -1.36
SLC6A20-201ENST00000353278 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
SLC6A20-201ENST00000353278 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
SLC6A20-201ENST00000353278 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
SLC6A20-201ENST00000353278 NF1P21359 2839 aa6.56□□□□□ -1.36
SLC6A20-201ENST00000353278 M0QZ58 72 aa6.56□□□□□ -1.36
SLC6A20-201ENST00000353278 APCP25054 2843 aa6.56□□□□□ -1.36
SLC6A20-201ENST00000353278 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
SLC6A20-201ENST00000353278 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
SLC6A20-201ENST00000353278 Q5XG85 94 aa6.55□□□□□ -1.36
SLC6A20-201ENST00000353278 Q75L30 129 aa6.54□□□□□ -1.36
SLC6A20-201ENST00000353278 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
SLC6A20-201ENST00000353278 KMT2BQ9UMN6 2715 aaPredicted RBP6.52□□□□□ -1.37
SLC6A20-201ENST00000353278 FBN2P35556 2912 aa6.5□□□□□ -1.37
SLC6A20-201ENST00000353278 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
SLC6A20-201ENST00000353278 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
SLC6A20-201ENST00000353278 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
SLC6A20-201ENST00000353278 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
SLC6A20-201ENST00000353278 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
SLC6A20-201ENST00000353278 MXRA5Q9NR99 2828 aa6.43□□□□□ -1.38
SLC6A20-201ENST00000353278 Q5VV11 94 aa6.42□□□□□ -1.38
SLC6A20-201ENST00000353278 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
SLC6A20-201ENST00000353278 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
SLC6A20-201ENST00000353278 CELSR1Q9NYQ6 3014 aa6.4□□□□□ -1.38
SLC6A20-201ENST00000353278 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.39
SLC6A20-201ENST00000353278 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
SLC6A20-201ENST00000353278 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
SLC6A20-201ENST00000353278 CSMD1Q96PZ7 3565 aa6.36□□□□□ -1.39
SLC6A20-201ENST00000353278 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SLC6A20-201ENST00000353278 ROMO1P60602 79 aa6.34□□□□□ -1.39
SLC6A20-201ENST00000353278 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
SLC6A20-201ENST00000353278 SVEP1Q4LDE5 3571 aa6.34□□□□□ -1.39
SLC6A20-201ENST00000353278 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
SLC6A20-201ENST00000353278 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
SLC6A20-201ENST00000353278 A8MUU9 505 aa6.3□□□□□ -1.4
SLC6A20-201ENST00000353278 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
SLC6A20-201ENST00000353278 SPENQ96T58 3664 aaKnown RBP6.27□□□□□ -1.41
SLC6A20-201ENST00000353278 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
SLC6A20-201ENST00000353278 CUBNO60494 3623 aa6.23□□□□□ -1.41
SLC6A20-201ENST00000353278 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
SLC6A20-201ENST00000353278 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
SLC6A20-201ENST00000353278 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
SLC6A20-201ENST00000353278 OTOGQ6ZRI0 2925 aa6.15□□□□□ -1.42
SLC6A20-201ENST00000353278 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.43
SLC6A20-201ENST00000353278 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
SLC6A20-201ENST00000353278 VWFP04275 2813 aa6.1□□□□□ -1.43
SLC6A20-201ENST00000353278 XP32Q5T750 250 aa6.1□□□□□ -1.43
SLC6A20-201ENST00000353278 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
SLC6A20-201ENST00000353278 PDZD2O15018 2839 aa6.1□□□□□ -1.43
SLC6A20-201ENST00000353278 TNP1P09430 55 aa6.08□□□□□ -1.44
SLC6A20-201ENST00000353278 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
SLC6A20-201ENST00000353278 A8MU10 97 aa6.08□□□□□ -1.44
SLC6A20-201ENST00000353278 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
SLC6A20-201ENST00000353278 FBN1P35555 2871 aaKnown RBP6.05□□□□□ -1.44
SLC6A20-201ENST00000353278 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
SLC6A20-201ENST00000353278 H3BS24 57 aa6.04□□□□□ -1.44
SLC6A20-201ENST00000353278 A6NN06 94 aa6□□□□□ -1.45
SLC6A20-201ENST00000353278 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
SLC6A20-201ENST00000353278 KRTAP10-8P60410 259 aa5.98□□□□□ -1.45
SLC6A20-201ENST00000353278 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
SLC6A20-201ENST00000353278 PKD1L1Q8TDX9 2849 aa5.93□□□□□ -1.46
SLC6A20-201ENST00000353278 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
SLC6A20-201ENST00000353278 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
SLC6A20-201ENST00000353278 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
SLC6A20-201ENST00000353278 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
SLC6A20-201ENST00000353278 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SLC6A20-201ENST00000353278 KRTAP16-1A8MUX0 517 aa5.79□□□□□ -1.48
SLC6A20-201ENST00000353278 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
SLC6A20-201ENST00000353278 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
SLC6A20-201ENST00000353278 ZNF469Q96JG9 3925 aaPredicted RBP5.75□□□□□ -1.49
SLC6A20-201ENST00000353278 TGP01266 2768 aa5.71□□□□□ -1.49
SLC6A20-201ENST00000353278 ANK3Q12955 4377 aaKnown RBP5.69□□□□□ -1.5
SLC6A20-201ENST00000353278 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
SLC6A20-201ENST00000353278 P0C880 135 aa5.65□□□□□ -1.5
SLC6A20-201ENST00000353278 SRRM2Q9UQ35 2752 aaKnown RBP5.64□□□□□ -1.51
SLC6A20-201ENST00000353278 H0YAA0 97 aa5.63□□□□□ -1.51
SLC6A20-201ENST00000353278 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
SLC6A20-201ENST00000353278 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
SLC6A20-201ENST00000353278 COL7A1Q02388 2944 aa5.37□□□□□ -1.55
SLC6A20-201ENST00000353278 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
SLC6A20-201ENST00000353278 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
SLC6A20-201ENST00000353278 MT1HL1P0DM35 61 aa5.34□□□□□ -1.55
SLC6A20-201ENST00000353278 KRTAP12-2P59991 146 aa5.34□□□□□ -1.56
SLC6A20-201ENST00000353278 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
SLC6A20-201ENST00000353278 CSMD3Q7Z407 3707 aa5.28□□□□□ -1.56
SLC6A20-201ENST00000353278 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
SLC6A20-201ENST00000353278 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
SLC6A20-201ENST00000353278 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SLC6A20-201ENST00000353278 HUWE1Q7Z6Z7 4374 aaKnown RBP5.19□□□□□ -1.58
SLC6A20-201ENST00000353278 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
SLC6A20-201ENST00000353278 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
SLC6A20-201ENST00000353278 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
SLC6A20-201ENST00000353278 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
SLC6A20-201ENST00000353278 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
SLC6A20-201ENST00000353278 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
SLC6A20-201ENST00000353278 DNAH10Q8IVF4 4471 aa4.97□□□□□ -1.61
SLC6A20-201ENST00000353278 ANK2Q01484 3957 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms