RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
SNX3-202ENST00000349379 ATP11AUNQ6ZP68 121 aa11.62□□□□□ -0.55
SNX3-202ENST00000349379 LINC00313P59037 77 aa11.61□□□□□ -0.55
SNX3-202ENST00000349379 NOTCH2NLQ7Z3S9 236 aa11.59□□□□□ -0.55
SNX3-202ENST00000349379 MTURNQ8N3F0 131 aa11.58□□□□□ -0.56
SNX3-202ENST00000349379 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
SNX3-202ENST00000349379 J3KT08 172 aa11.56□□□□□ -0.56
SNX3-202ENST00000349379 SPCS1Q9Y6A9 102 aa11.56□□□□□ -0.56
SNX3-202ENST00000349379 IGHV6-1A0A0B4J1U7 121 aa11.55□□□□□ -0.56
SNX3-202ENST00000349379 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
SNX3-202ENST00000349379 C8orf87E5RJ46 101 aa11.53□□□□□ -0.56
SNX3-202ENST00000349379 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
SNX3-202ENST00000349379 MT1HP80294 61 aa11.46□□□□□ -0.57
SNX3-202ENST00000349379 A8MWP4 228 aa11.44□□□□□ -0.58
SNX3-202ENST00000349379 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
SNX3-202ENST00000349379 K7EP34 96 aa11.43□□□□□ -0.58
SNX3-202ENST00000349379 NDUFB1O75438 58 aa11.43□□□□□ -0.58
SNX3-202ENST00000349379 NREPQ16612 68 aa11.41□□□□□ -0.58
SNX3-202ENST00000349379 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
SNX3-202ENST00000349379 PCP4L1A6NKN8 68 aa11.4□□□□□ -0.58
SNX3-202ENST00000349379 FSIP2Q5CZC0 6907 aa11.39□□□□□ -0.59
SNX3-202ENST00000349379 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
SNX3-202ENST00000349379 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
SNX3-202ENST00000349379 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
SNX3-202ENST00000349379 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
SNX3-202ENST00000349379 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
SNX3-202ENST00000349379 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
SNX3-202ENST00000349379 FLGP20930 4061 aaPredicted RBP11.34□□□□□ -0.59
SNX3-202ENST00000349379 GTF2H5Q6ZYL4 71 aa11.29□□□□□ -0.6
SNX3-202ENST00000349379 Q6ZVQ6 151 aa11.27□□□□□ -0.61
SNX3-202ENST00000349379 ZCCHC13Q8WW36 166 aaKnown RBP11.27□□□□□ -0.61
SNX3-202ENST00000349379 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
SNX3-202ENST00000349379 K7EQZ3 153 aa11.25□□□□□ -0.61
SNX3-202ENST00000349379 BPY2O14599 106 aa11.23□□□□□ -0.61
SNX3-202ENST00000349379 HRES1P13985 223 aa11.23□□□□□ -0.61
SNX3-202ENST00000349379 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SNX3-202ENST00000349379 TMEM254Q8TBM7 123 aa11.22□□□□□ -0.61
SNX3-202ENST00000349379 CRCT1Q9UGL9 99 aa11.22□□□□□ -0.61
SNX3-202ENST00000349379 F8W1H4 67 aa11.21□□□□□ -0.61
SNX3-202ENST00000349379 LORP23490 312 aaPredicted RBP11.2□□□□□ -0.62
SNX3-202ENST00000349379 KRTAP10-6P60371 365 aaPredicted RBP11.2□□□□□ -0.62
SNX3-202ENST00000349379 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
SNX3-202ENST00000349379 LINC00846Q9NV44 126 aa11.19□□□□□ -0.62
SNX3-202ENST00000349379 M0R2T5 61 aa11.17□□□□□ -0.62
SNX3-202ENST00000349379 hDV103S1A0JD37 113 aa11.16□□□□□ -0.62
SNX3-202ENST00000349379 ETDBQ3ZM63 59 aa11.13□□□□□ -0.63
SNX3-202ENST00000349379 UBL5Q9BZL1 73 aa11.13□□□□□ -0.63
SNX3-202ENST00000349379 SPINK7P58062 85 aa11.12□□□□□ -0.63
SNX3-202ENST00000349379 Q8N9L7 120 aa11.12□□□□□ -0.63
SNX3-202ENST00000349379 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
SNX3-202ENST00000349379 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
SNX3-202ENST00000349379 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
SNX3-202ENST00000349379 WFDC13Q8IUB5 93 aa11.04□□□□□ -0.64
SNX3-202ENST00000349379 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
SNX3-202ENST00000349379 NDUFS5O43920 106 aa11.02□□□□□ -0.65
SNX3-202ENST00000349379 Q5W150 140 aa10.96□□□□□ -0.65
SNX3-202ENST00000349379 HCG22E2RYF7 251 aa10.95□□□□□ -0.66
SNX3-202ENST00000349379 CXCL6P80162 114 aa10.95□□□□□ -0.66
SNX3-202ENST00000349379 KRTAP9-8Q9BYQ0 159 aa10.9□□□□□ -0.66
SNX3-202ENST00000349379 ACYP1P07311 99 aa10.88□□□□□ -0.67
SNX3-202ENST00000349379 FAM240AA0A1B0GVK7 77 aa10.87□□□□□ -0.67
SNX3-202ENST00000349379 C7orf65Q6ZTY9 151 aa10.85□□□□□ -0.67
SNX3-202ENST00000349379 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
SNX3-202ENST00000349379 A0A1B0GV90 55 aa10.83□□□□□ -0.68
SNX3-202ENST00000349379 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
SNX3-202ENST00000349379 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
SNX3-202ENST00000349379 MT2AP02795 61 aa10.74□□□□□ -0.69
SNX3-202ENST00000349379 ATP5EP2Q5VTU8 51 aa10.74□□□□□ -0.69
SNX3-202ENST00000349379 H1FX-AS1Q4G0G2 97 aa10.7□□□□□ -0.7
SNX3-202ENST00000349379 KRTAP9-7A8MTY7 169 aa10.68□□□□□ -0.7
SNX3-202ENST00000349379 MT1FP04733 61 aa10.66□□□□□ -0.7
SNX3-202ENST00000349379 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
SNX3-202ENST00000349379 LINC00643Q86TS7 51 aa10.63□□□□□ -0.71
SNX3-202ENST00000349379 HIST1H4AP62805 103 aaKnown RBP10.6□□□□□ -0.71
SNX3-202ENST00000349379 KRTAP10-10P60014 251 aa10.56□□□□□ -0.72
SNX3-202ENST00000349379 KRTAP3-1Q9BYR8 98 aa10.55□□□□□ -0.72
SNX3-202ENST00000349379 KRTAP9-3Q9BYQ3 159 aa10.54□□□□□ -0.72
SNX3-202ENST00000349379 TRAV22A0A0B4J277 110 aa10.53□□□□□ -0.72
SNX3-202ENST00000349379 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.53□□□□□ -0.72
SNX3-202ENST00000349379 A0A087WVE0 104 aa10.51□□□□□ -0.73
SNX3-202ENST00000349379 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
SNX3-202ENST00000349379 J3QR89 54 aa10.48□□□□□ -0.73
SNX3-202ENST00000349379 UQCRQO14949 82 aa10.48□□□□□ -0.73
SNX3-202ENST00000349379 C1orf64Q8NEQ6 169 aa10.47□□□□□ -0.73
SNX3-202ENST00000349379 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
SNX3-202ENST00000349379 LCE2BO14633 110 aa10.44□□□□□ -0.74
SNX3-202ENST00000349379 H0Y9P7 68 aa10.39□□□□□ -0.75
SNX3-202ENST00000349379 USH2AO75445 5202 aa10.39□□□□□ -0.75
SNX3-202ENST00000349379 ATOX1O00244 68 aa10.38□□□□□ -0.75
SNX3-202ENST00000349379 S4R3F8 94 aa10.37□□□□□ -0.75
SNX3-202ENST00000349379 OCR1Q9BZK8 76 aa10.35□□□□□ -0.75
SNX3-202ENST00000349379 C5orf47Q569G3 176 aa10.32□□□□□ -0.76
SNX3-202ENST00000349379 LCA10Q71F78 164 aa10.32□□□□□ -0.76
SNX3-202ENST00000349379 SSPOA2VEC9 5147 aa10.28□□□□□ -0.76
SNX3-202ENST00000349379 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
SNX3-202ENST00000349379 LINC00208Q96KT6 92 aa10.24□□□□□ -0.77
SNX3-202ENST00000349379 MP68P56378 58 aa10.2□□□□□ -0.78
SNX3-202ENST00000349379 K7ERU9 68 aa10.19□□□□□ -0.78
SNX3-202ENST00000349379 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
SNX3-202ENST00000349379 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms