RNA–Protein interactions for RNA: ENST00000348549.9

CASP9-202, Transcript of caspase 9, humanhuman

TSL 1 (best) BASIC

Gene CASP9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-202ENST00000348549 C8orf17Q9NRJ1 99 aa13.82□□□□□ -0.2
CASP9-202ENST00000348549 LRP1Q07954 4544 aaKnown RBP13.82□□□□□ -0.2
CASP9-202ENST00000348549 FAT3Q8TDW7 4589 aa13.82□□□□□ -0.2
CASP9-202ENST00000348549 FLG2Q5D862 2391 aaPredicted RBP13.81□□□□□ -0.2
CASP9-202ENST00000348549 CASC2Q6XLA1 102 aa13.81□□□□□ -0.2
CASP9-202ENST00000348549 WFDC13Q8IUB5 93 aa13.81□□□□□ -0.2
CASP9-202ENST00000348549 SERP2Q8N6R1 65 aa13.79□□□□□ -0.2
CASP9-202ENST00000348549 TNXBP22105 4242 aa13.79□□□□□ -0.2
CASP9-202ENST00000348549 TRAV7A0A075B6U4 112 aa13.77□□□□□ -0.21
CASP9-202ENST00000348549 C8orf87E5RJ46 101 aa13.77□□□□□ -0.21
CASP9-202ENST00000348549 hDV103S1A0JD37 113 aa13.75□□□□□ -0.21
CASP9-202ENST00000348549 BIRC6Q9NR09 4857 aa13.75□□□□□ -0.21
CASP9-202ENST00000348549 OCR1Q9BZK8 76 aa13.75□□□□□ -0.21
CASP9-202ENST00000348549 KRTAP4-5Q9BYR2 181 aa13.74□□□□□ -0.21
CASP9-202ENST00000348549 OXTP01178 125 aa13.73□□□□□ -0.21
CASP9-202ENST00000348549 MT1HL1P0DM35 61 aa13.73□□□□□ -0.21
CASP9-202ENST00000348549 COX7CP15954 63 aa13.73□□□□□ -0.21
CASP9-202ENST00000348549 NOTCH2NLQ7Z3S9 236 aa13.72□□□□□ -0.21
CASP9-202ENST00000348549 TMEM254Q8TBM7 123 aa13.7□□□□□ -0.22
CASP9-202ENST00000348549 UQCRQO14949 82 aa13.69□□□□□ -0.22
CASP9-202ENST00000348549 LINC00313P59037 77 aa13.68□□□□□ -0.22
CASP9-202ENST00000348549 MRPL34Q9BQ48 92 aaKnown RBP13.65□□□□□ -0.22
CASP9-202ENST00000348549 CCDC179H3BU77 68 aa13.63□□□□□ -0.23
CASP9-202ENST00000348549 MYCBP2O75592 4640 aa13.61□□□□□ -0.23
CASP9-202ENST00000348549 DMBT1Q9UGM3 2413 aaPredicted RBP13.59□□□□□ -0.23
CASP9-202ENST00000348549 HERC2O95714 4834 aa13.59□□□□□ -0.23
CASP9-202ENST00000348549 RETNLBQ9BQ08 111 aa13.57□□□□□ -0.24
CASP9-202ENST00000348549 TP53AIP1Q9HCN2 124 aa13.56□□□□□ -0.24
CASP9-202ENST00000348549 KRTAP16-1A8MUX0 517 aa13.55□□□□□ -0.24
CASP9-202ENST00000348549 C5orf47Q569G3 176 aa13.52□□□□□ -0.25
CASP9-202ENST00000348549 FP248Q71RG6 208 aaPredicted RBP13.52□□□□□ -0.25
CASP9-202ENST00000348549 Q8N9P0 234 aaPredicted RBP13.51□□□□□ -0.25
CASP9-202ENST00000348549 NDUFS5O43920 106 aa13.5□□□□□ -0.25
CASP9-202ENST00000348549 C20orf197Q8N268 126 aa13.5□□□□□ -0.25
CASP9-202ENST00000348549 KLKP1Q107X0 134 aa13.44□□□□□ -0.26
CASP9-202ENST00000348549 A0A0U1RQV1 116 aa13.42□□□□□ -0.26
CASP9-202ENST00000348549 MP68P56378 58 aa13.42□□□□□ -0.26
CASP9-202ENST00000348549 ABCA13Q86UQ4 5058 aa13.41□□□□□ -0.26
CASP9-202ENST00000348549 TRAV22A0A0B4J277 110 aa13.41□□□□□ -0.26
CASP9-202ENST00000348549 H0Y9P7 68 aa13.4□□□□□ -0.26
CASP9-202ENST00000348549 H3BPC8 53 aa13.39□□□□□ -0.27
CASP9-202ENST00000348549 C9orf92A6NGG3 77 aa13.38□□□□□ -0.27
CASP9-202ENST00000348549 SNURFQ9Y675 71 aa13.38□□□□□ -0.27
CASP9-202ENST00000348549 IGLV7-46A0A075B6I9 117 aa13.35□□□□□ -0.27
CASP9-202ENST00000348549 CYSTM1Q9H1C7 97 aa13.35□□□□□ -0.27
CASP9-202ENST00000348549 ZCCHC13Q8WW36 166 aaKnown RBP13.35□□□□□ -0.27
CASP9-202ENST00000348549 KRTAP13-3Q3SY46 172 aa13.32□□□□□ -0.28
CASP9-202ENST00000348549 C20orf166-AS1Q96NR2 134 aa13.32□□□□□ -0.28
CASP9-202ENST00000348549 J3QL48 77 aa13.31□□□□□ -0.28
CASP9-202ENST00000348549 Q5W150 140 aa13.31□□□□□ -0.28
CASP9-202ENST00000348549 A8MUU9 505 aa13.31□□□□□ -0.28
CASP9-202ENST00000348549 LINC00208Q96KT6 92 aa13.31□□□□□ -0.28
CASP9-202ENST00000348549 NDUFC1O43677 76 aa13.3□□□□□ -0.28
CASP9-202ENST00000348549 C1orf64Q8NEQ6 169 aa13.27□□□□□ -0.29
CASP9-202ENST00000348549 H7BZZ5 65 aa13.24□□□□□ -0.29
CASP9-202ENST00000348549 PRR4Q16378 134 aa13.24□□□□□ -0.29
CASP9-202ENST00000348549 Q75L30 129 aa13.21□□□□□ -0.29
CASP9-202ENST00000348549 LOC101927531A0A1B0GV80 90 aa13.18□□□□□ -0.3
CASP9-202ENST00000348549 TMEM258P61165 79 aa13.17□□□□□ -0.3
CASP9-202ENST00000348549 TPRXLQ17RH7 258 aa13.15□□□□□ -0.3
CASP9-202ENST00000348549 XP32Q5T750 250 aa13.13□□□□□ -0.31
CASP9-202ENST00000348549 IGKV2-30P06310 120 aa13.1□□□□□ -0.31
CASP9-202ENST00000348549 CYP4F30PQ9H0H9 118 aa13.09□□□□□ -0.31
CASP9-202ENST00000348549 RPL37P61927 97 aaKnown RBP13.07□□□□□ -0.32
CASP9-202ENST00000348549 FAM236DA0A1B0GTK5 79 aa13.02□□□□□ -0.33
CASP9-202ENST00000348549 FAM236CP0DP71 79 aa13.02□□□□□ -0.33
CASP9-202ENST00000348549 ATP5EP56381 51 aaPredicted RBP13□□□□□ -0.33
CASP9-202ENST00000348549 PCOTHQ58A44 107 aa13□□□□□ -0.33
CASP9-202ENST00000348549 ATP11AUNQ6ZP68 121 aa12.99□□□□□ -0.33
CASP9-202ENST00000348549 SPANXA2-OT1Q8N9U9 137 aa12.99□□□□□ -0.33
CASP9-202ENST00000348549 IGKV2D-30A0A075B6S6 120 aa12.98□□□□□ -0.33
CASP9-202ENST00000348549 C7orf65Q6ZTY9 151 aa12.96□□□□□ -0.33
CASP9-202ENST00000348549 PCLOQ9Y6V0 5065 aa12.91□□□□□ -0.34
CASP9-202ENST00000348549 HRES1P13985 223 aa12.86□□□□□ -0.35
CASP9-202ENST00000348549 SPINK7P58062 85 aa12.84□□□□□ -0.35
CASP9-202ENST00000348549 LPAP08519 4548 aa12.79□□□□□ -0.36
CASP9-202ENST00000348549 LRP2P98164 4655 aa12.77□□□□□ -0.37
CASP9-202ENST00000348549 SERP1Q9Y6X1 66 aa12.76□□□□□ -0.37
CASP9-202ENST00000348549 RPS28P62857 69 aaKnown RBP12.74□□□□□ -0.37
CASP9-202ENST00000348549 SEC61BP60468 96 aaKnown RBP12.7□□□□□ -0.38
CASP9-202ENST00000348549 DMAC1Q96GE9 116 aa12.69□□□□□ -0.38
CASP9-202ENST00000348549 HERC1Q15751 4861 aa12.63□□□□□ -0.39
CASP9-202ENST00000348549 C4orf26Q17RF5 130 aa12.63□□□□□ -0.39
CASP9-202ENST00000348549 ACYP2P14621 99 aa12.6□□□□□ -0.39
CASP9-202ENST00000348549 A8MUN3 132 aa12.59□□□□□ -0.39
CASP9-202ENST00000348549 COA5Q86WW8 74 aa12.56□□□□□ -0.4
CASP9-202ENST00000348549 HMCN2Q8NDA2 5059 aa12.54□□□□□ -0.4
CASP9-202ENST00000348549 COX6B2Q6YFQ2 88 aa12.54□□□□□ -0.4
CASP9-202ENST00000348549 MUC17Q685J3 4493 aa12.5□□□□□ -0.41
CASP9-202ENST00000348549 KRTAP3-1Q9BYR8 98 aa12.5□□□□□ -0.41
CASP9-202ENST00000348549 MPLKIPQ8TAP9 179 aa12.44□□□□□ -0.42
CASP9-202ENST00000348549 SMIM26A0A096LP01 95 aa12.42□□□□□ -0.42
CASP9-202ENST00000348549 KRTAP4-1Q9BYQ7 146 aa12.37□□□□□ -0.43
CASP9-202ENST00000348549 CHKB-CPT1BH3BT56 60 aa12.37□□□□□ -0.43
CASP9-202ENST00000348549 RBM12B-AS1Q9P1G2 102 aa12.35□□□□□ -0.43
CASP9-202ENST00000348549 H1FX-AS1Q4G0G2 97 aa12.24□□□□□ -0.45
CASP9-202ENST00000348549 Q1T7F1 81 aa12.19□□□□□ -0.46
CASP9-202ENST00000348549 SPTSSBQ8NFR3 76 aa12.18□□□□□ -0.46
CASP9-202ENST00000348549 V9GYY9 64 aa12.16□□□□□ -0.46
CASP9-202ENST00000348549 S4R3F8 94 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms