RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
PTN-201ENST00000348225 CASC2Q6XLA1 102 aa10.65□□□□□ -0.7
PTN-201ENST00000348225 WFDC13Q8IUB5 93 aa10.65□□□□□ -0.7
PTN-201ENST00000348225 MMP24-AS1A0A0U1RRL7 71 aa10.64□□□□□ -0.71
PTN-201ENST00000348225 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
PTN-201ENST00000348225 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
PTN-201ENST00000348225 C8orf17Q9NRJ1 99 aa10.63□□□□□ -0.71
PTN-201ENST00000348225 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
PTN-201ENST00000348225 TRAV7A0A075B6U4 112 aa10.62□□□□□ -0.71
PTN-201ENST00000348225 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
PTN-201ENST00000348225 TNXBP22105 4242 aa10.6□□□□□ -0.71
PTN-201ENST00000348225 hDV103S1A0JD37 113 aa10.6□□□□□ -0.71
PTN-201ENST00000348225 COX7CP15954 63 aa10.6□□□□□ -0.71
PTN-201ENST00000348225 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
PTN-201ENST00000348225 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
PTN-201ENST00000348225 UQCRQO14949 82 aa10.58□□□□□ -0.72
PTN-201ENST00000348225 OCR1Q9BZK8 76 aa10.57□□□□□ -0.72
PTN-201ENST00000348225 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
PTN-201ENST00000348225 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
PTN-201ENST00000348225 LINC00313P59037 77 aa10.52□□□□□ -0.73
PTN-201ENST00000348225 NOTCH2NLQ7Z3S9 236 aa10.51□□□□□ -0.73
PTN-201ENST00000348225 MRPL34Q9BQ48 92 aaKnown RBP10.51□□□□□ -0.73
PTN-201ENST00000348225 HERC2O95714 4834 aa10.51□□□□□ -0.73
PTN-201ENST00000348225 OXTP01178 125 aa10.51□□□□□ -0.73
PTN-201ENST00000348225 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
PTN-201ENST00000348225 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
PTN-201ENST00000348225 MYCBP2O75592 4640 aa10.46□□□□□ -0.73
PTN-201ENST00000348225 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.74
PTN-201ENST00000348225 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
PTN-201ENST00000348225 NDUFS5O43920 106 aa10.44□□□□□ -0.74
PTN-201ENST00000348225 C20orf197Q8N268 126 aa10.43□□□□□ -0.74
PTN-201ENST00000348225 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
PTN-201ENST00000348225 C5orf47Q569G3 176 aa10.42□□□□□ -0.74
PTN-201ENST00000348225 LCE2BO14633 110 aa10.41□□□□□ -0.74
PTN-201ENST00000348225 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
PTN-201ENST00000348225 MP68P56378 58 aa10.37□□□□□ -0.75
PTN-201ENST00000348225 FP248Q71RG6 208 aaPredicted RBP10.37□□□□□ -0.75
PTN-201ENST00000348225 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
PTN-201ENST00000348225 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
PTN-201ENST00000348225 ABCA13Q86UQ4 5058 aa10.35□□□□□ -0.75
PTN-201ENST00000348225 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
PTN-201ENST00000348225 H0Y9P7 68 aa10.34□□□□□ -0.75
PTN-201ENST00000348225 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
PTN-201ENST00000348225 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
PTN-201ENST00000348225 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
PTN-201ENST00000348225 H3BPC8 53 aa10.31□□□□□ -0.76
PTN-201ENST00000348225 C9orf92A6NGG3 77 aa10.29□□□□□ -0.76
PTN-201ENST00000348225 NDUFC1O43677 76 aa10.28□□□□□ -0.76
PTN-201ENST00000348225 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
PTN-201ENST00000348225 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
PTN-201ENST00000348225 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
PTN-201ENST00000348225 IGLV7-46A0A075B6I9 117 aa10.25□□□□□ -0.77
PTN-201ENST00000348225 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
PTN-201ENST00000348225 J3QL48 77 aa10.23□□□□□ -0.77
PTN-201ENST00000348225 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
PTN-201ENST00000348225 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
PTN-201ENST00000348225 Q5W150 140 aa10.21□□□□□ -0.78
PTN-201ENST00000348225 H7BZZ5 65 aa10.2□□□□□ -0.78
PTN-201ENST00000348225 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
PTN-201ENST00000348225 A8MUU9 505 aa10.19□□□□□ -0.78
PTN-201ENST00000348225 TMEM258P61165 79 aa10.18□□□□□ -0.78
PTN-201ENST00000348225 PRR4Q16378 134 aa10.18□□□□□ -0.78
PTN-201ENST00000348225 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
PTN-201ENST00000348225 Q75L30 129 aa10.14□□□□□ -0.79
PTN-201ENST00000348225 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
PTN-201ENST00000348225 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
PTN-201ENST00000348225 IGKV2-30P06310 120 aa10.07□□□□□ -0.8
PTN-201ENST00000348225 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
PTN-201ENST00000348225 ATP5EP56381 51 aaPredicted RBP10.06□□□□□ -0.8
PTN-201ENST00000348225 XP32Q5T750 250 aa10.06□□□□□ -0.8
PTN-201ENST00000348225 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
PTN-201ENST00000348225 PCOTHQ58A44 107 aa10.04□□□□□ -0.8
PTN-201ENST00000348225 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
PTN-201ENST00000348225 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
PTN-201ENST00000348225 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
PTN-201ENST00000348225 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
PTN-201ENST00000348225 C7orf65Q6ZTY9 151 aa9.99□□□□□ -0.81
PTN-201ENST00000348225 HRES1P13985 223 aa9.9□□□□□ -0.82
PTN-201ENST00000348225 SPINK7P58062 85 aa9.87□□□□□ -0.83
PTN-201ENST00000348225 SERP1Q9Y6X1 66 aa9.86□□□□□ -0.83
PTN-201ENST00000348225 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
PTN-201ENST00000348225 LPAP08519 4548 aa9.83□□□□□ -0.84
PTN-201ENST00000348225 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
PTN-201ENST00000348225 HERC1Q15751 4861 aa9.81□□□□□ -0.84
PTN-201ENST00000348225 LRP2P98164 4655 aa9.79□□□□□ -0.84
PTN-201ENST00000348225 DMAC1Q96GE9 116 aa9.76□□□□□ -0.85
PTN-201ENST00000348225 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
PTN-201ENST00000348225 ACYP2P14621 99 aa9.73□□□□□ -0.85
PTN-201ENST00000348225 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
PTN-201ENST00000348225 A8MUN3 132 aa9.69□□□□□ -0.86
PTN-201ENST00000348225 COA5Q86WW8 74 aa9.69□□□□□ -0.86
PTN-201ENST00000348225 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
PTN-201ENST00000348225 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
PTN-201ENST00000348225 LOC100996750A0A140TA64 210 aa9.61□□□□□ -0.87
PTN-201ENST00000348225 KRTAP4-6Q9BYQ5 205 aa9.61□□□□□ -0.87
PTN-201ENST00000348225 MUC17Q685J3 4493 aa9.61□□□□□ -0.87
PTN-201ENST00000348225 SMIM26A0A096LP01 95 aa9.6□□□□□ -0.87
PTN-201ENST00000348225 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
PTN-201ENST00000348225 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
PTN-201ENST00000348225 RBM12B-AS1Q9P1G2 102 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms