RNA–Protein interactions for RNA: ENST00000346785.9

SLC41A3-202, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2 BASIC

Gene SLC41A3, Length 1,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-202ENST00000346785 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.41
SLC41A3-202ENST00000346785 IGHV6-1A0A0B4J1U7 121 aa12.45□□□□□ -0.42
SLC41A3-202ENST00000346785 MMP24-AS1A0A0U1RRL7 71 aa12.45□□□□□ -0.42
SLC41A3-202ENST00000346785 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
SLC41A3-202ENST00000346785 hDV103S1A0JD37 113 aa12.43□□□□□ -0.42
SLC41A3-202ENST00000346785 C1orf195Q5TG92 126 aa12.42□□□□□ -0.42
SLC41A3-202ENST00000346785 C8orf87E5RJ46 101 aa12.41□□□□□ -0.42
SLC41A3-202ENST00000346785 EPPK1P58107 5090 aaKnown RBP12.39□□□□□ -0.43
SLC41A3-202ENST00000346785 C20orf197Q8N268 126 aa12.37□□□□□ -0.43
SLC41A3-202ENST00000346785 TMEM254Q8TBM7 123 aa12.35□□□□□ -0.43
SLC41A3-202ENST00000346785 C5orf47Q569G3 176 aa12.34□□□□□ -0.43
SLC41A3-202ENST00000346785 KIAA1109Q2LD37 5005 aa12.33□□□□□ -0.43
SLC41A3-202ENST00000346785 KLKP1Q107X0 134 aa12.32□□□□□ -0.44
SLC41A3-202ENST00000346785 TP53AIP1Q9HCN2 124 aa12.32□□□□□ -0.44
SLC41A3-202ENST00000346785 MRPL34Q9BQ48 92 aaKnown RBP12.31□□□□□ -0.44
SLC41A3-202ENST00000346785 KRTAP17-1Q9BYP8 105 aa12.31□□□□□ -0.44
SLC41A3-202ENST00000346785 KRTAP10-8P60410 259 aa12.3□□□□□ -0.44
SLC41A3-202ENST00000346785 LINC00313P59037 77 aa12.28□□□□□ -0.44
SLC41A3-202ENST00000346785 NDUFC1O43677 76 aa12.27□□□□□ -0.45
SLC41A3-202ENST00000346785 MP68P56378 58 aa12.26□□□□□ -0.45
SLC41A3-202ENST00000346785 A0A0U1RQV1 116 aa12.23□□□□□ -0.45
SLC41A3-202ENST00000346785 NDUFS5O43920 106 aa12.23□□□□□ -0.45
SLC41A3-202ENST00000346785 NOTCH2NLQ7Z3S9 236 aa12.23□□□□□ -0.45
SLC41A3-202ENST00000346785 H3BPC8 53 aa12.23□□□□□ -0.45
SLC41A3-202ENST00000346785 SNURFQ9Y675 71 aa12.23□□□□□ -0.45
SLC41A3-202ENST00000346785 OXTP01178 125 aa12.2□□□□□ -0.46
SLC41A3-202ENST00000346785 TMEM258P61165 79 aa12.2□□□□□ -0.46
SLC41A3-202ENST00000346785 TRAV22A0A0B4J277 110 aa12.19□□□□□ -0.46
SLC41A3-202ENST00000346785 H0Y9P7 68 aa12.17□□□□□ -0.46
SLC41A3-202ENST00000346785 CYSTM1Q9H1C7 97 aa12.17□□□□□ -0.46
SLC41A3-202ENST00000346785 H7BZZ5 65 aa12.13□□□□□ -0.47
SLC41A3-202ENST00000346785 Q8N9P0 234 aaPredicted RBP12.11□□□□□ -0.47
SLC41A3-202ENST00000346785 ZCCHC13Q8WW36 166 aaKnown RBP12.11□□□□□ -0.47
SLC41A3-202ENST00000346785 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
SLC41A3-202ENST00000346785 MT1HL1P0DM35 61 aa12.09□□□□□ -0.47
SLC41A3-202ENST00000346785 LINC00208Q96KT6 92 aa12.09□□□□□ -0.47
SLC41A3-202ENST00000346785 TNXBP22105 4242 aa12.09□□□□□ -0.47
SLC41A3-202ENST00000346785 LRP1Q07954 4544 aaKnown RBP12.09□□□□□ -0.47
SLC41A3-202ENST00000346785 FLG2Q5D862 2391 aaPredicted RBP12.09□□□□□ -0.47
SLC41A3-202ENST00000346785 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
SLC41A3-202ENST00000346785 C1orf64Q8NEQ6 169 aa12.06□□□□□ -0.48
SLC41A3-202ENST00000346785 ATP5EP56381 51 aaPredicted RBP12.05□□□□□ -0.48
SLC41A3-202ENST00000346785 FP248Q71RG6 208 aaPredicted RBP12.03□□□□□ -0.48
SLC41A3-202ENST00000346785 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
SLC41A3-202ENST00000346785 BIRC6Q9NR09 4857 aa12.03□□□□□ -0.48
SLC41A3-202ENST00000346785 FAM236DA0A1B0GTK5 79 aa12.02□□□□□ -0.49
SLC41A3-202ENST00000346785 FAM236CP0DP71 79 aa12.02□□□□□ -0.49
SLC41A3-202ENST00000346785 RETNLBQ9BQ08 111 aa11.99□□□□□ -0.49
SLC41A3-202ENST00000346785 LOC101927531A0A1B0GV80 90 aa11.97□□□□□ -0.49
SLC41A3-202ENST00000346785 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
SLC41A3-202ENST00000346785 KRTAP13-3Q3SY46 172 aa11.94□□□□□ -0.5
SLC41A3-202ENST00000346785 DMBT1Q9UGM3 2413 aaPredicted RBP11.92□□□□□ -0.5
SLC41A3-202ENST00000346785 Q5W150 140 aa11.91□□□□□ -0.5
SLC41A3-202ENST00000346785 C9orf92A6NGG3 77 aa11.89□□□□□ -0.51
SLC41A3-202ENST00000346785 HERC2O95714 4834 aa11.89□□□□□ -0.51
SLC41A3-202ENST00000346785 SPANXA2-OT1Q8N9U9 137 aa11.88□□□□□ -0.51
SLC41A3-202ENST00000346785 C20orf166-AS1Q96NR2 134 aa11.88□□□□□ -0.51
SLC41A3-202ENST00000346785 A8MUU9 505 aa11.85□□□□□ -0.51
SLC41A3-202ENST00000346785 IGLV7-46A0A075B6I9 117 aa11.84□□□□□ -0.51
SLC41A3-202ENST00000346785 RPS28P62857 69 aaKnown RBP11.84□□□□□ -0.51
SLC41A3-202ENST00000346785 J3QL48 77 aa11.82□□□□□ -0.52
SLC41A3-202ENST00000346785 SERP1Q9Y6X1 66 aa11.81□□□□□ -0.52
SLC41A3-202ENST00000346785 CYP4F30PQ9H0H9 118 aa11.8□□□□□ -0.52
SLC41A3-202ENST00000346785 IGKV2-30P06310 120 aa11.79□□□□□ -0.52
SLC41A3-202ENST00000346785 PCOTHQ58A44 107 aa11.79□□□□□ -0.52
SLC41A3-202ENST00000346785 Q75L30 129 aa11.78□□□□□ -0.52
SLC41A3-202ENST00000346785 PRR4Q16378 134 aa11.74□□□□□ -0.53
SLC41A3-202ENST00000346785 ABCA13Q86UQ4 5058 aa11.73□□□□□ -0.53
SLC41A3-202ENST00000346785 C7orf65Q6ZTY9 151 aa11.69□□□□□ -0.54
SLC41A3-202ENST00000346785 IGKV2D-30A0A075B6S6 120 aa11.69□□□□□ -0.54
SLC41A3-202ENST00000346785 TPRXLQ17RH7 258 aa11.68□□□□□ -0.54
SLC41A3-202ENST00000346785 ATP11AUNQ6ZP68 121 aa11.63□□□□□ -0.55
SLC41A3-202ENST00000346785 XP32Q5T750 250 aa11.62□□□□□ -0.55
SLC41A3-202ENST00000346785 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
SLC41A3-202ENST00000346785 HRES1P13985 223 aa11.6□□□□□ -0.55
SLC41A3-202ENST00000346785 SMIM26A0A096LP01 95 aa11.52□□□□□ -0.57
SLC41A3-202ENST00000346785 DMAC1Q96GE9 116 aa11.5□□□□□ -0.57
SLC41A3-202ENST00000346785 ACYP2P14621 99 aa11.49□□□□□ -0.57
SLC41A3-202ENST00000346785 SPINK7P58062 85 aa11.49□□□□□ -0.57
SLC41A3-202ENST00000346785 COA5Q86WW8 74 aa11.47□□□□□ -0.57
SLC41A3-202ENST00000346785 A8MUN3 132 aa11.43□□□□□ -0.58
SLC41A3-202ENST00000346785 CHKB-CPT1BH3BT56 60 aa11.34□□□□□ -0.59
SLC41A3-202ENST00000346785 C4orf26Q17RF5 130 aa11.34□□□□□ -0.59
SLC41A3-202ENST00000346785 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
SLC41A3-202ENST00000346785 V9GYY9 64 aa11.3□□□□□ -0.6
SLC41A3-202ENST00000346785 SEC61BP60468 96 aaKnown RBP11.29□□□□□ -0.6
SLC41A3-202ENST00000346785 Q1T7F1 81 aa11.25□□□□□ -0.61
SLC41A3-202ENST00000346785 COX6B2Q6YFQ2 88 aa11.24□□□□□ -0.61
SLC41A3-202ENST00000346785 MPLKIPQ8TAP9 179 aa11.23□□□□□ -0.61
SLC41A3-202ENST00000346785 LPAP08519 4548 aa11.19□□□□□ -0.62
SLC41A3-202ENST00000346785 LRP2P98164 4655 aa11.18□□□□□ -0.62
SLC41A3-202ENST00000346785 SPTSSBQ8NFR3 76 aa11.15□□□□□ -0.63
SLC41A3-202ENST00000346785 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
SLC41A3-202ENST00000346785 LINC01558Q9Y6Z2 57 aa11.07□□□□□ -0.64
SLC41A3-202ENST00000346785 RBM12B-AS1Q9P1G2 102 aa11.06□□□□□ -0.64
SLC41A3-202ENST00000346785 HERC1Q15751 4861 aa11.06□□□□□ -0.64
SLC41A3-202ENST00000346785 HMCN2Q8NDA2 5059 aa11□□□□□ -0.65
SLC41A3-202ENST00000346785 PRR15LQ9BU68 103 aa10.99□□□□□ -0.65
SLC41A3-202ENST00000346785 PSPHP1O15172 72 aa10.98□□□□□ -0.65
SLC41A3-202ENST00000346785 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms