RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 C8orf17Q9NRJ1 99 aa8.21□□□□□ -1.09
CDK5RAP1-202ENST00000346416 SMR3BP02814 79 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP1-202ENST00000346416 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP1-202ENST00000346416 MP68P56378 58 aa8.21□□□□□ -1.1
CDK5RAP1-202ENST00000346416 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
CDK5RAP1-202ENST00000346416 Q5XG85 94 aa8.2□□□□□ -1.1
CDK5RAP1-202ENST00000346416 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
CDK5RAP1-202ENST00000346416 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP1-202ENST00000346416 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
CDK5RAP1-202ENST00000346416 H3BPC8 53 aa8.16□□□□□ -1.1
CDK5RAP1-202ENST00000346416 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
CDK5RAP1-202ENST00000346416 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
CDK5RAP1-202ENST00000346416 FAT1Q14517 4588 aa8.13□□□□□ -1.11
CDK5RAP1-202ENST00000346416 H0Y9P7 68 aa8.13□□□□□ -1.11
CDK5RAP1-202ENST00000346416 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
CDK5RAP1-202ENST00000346416 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
CDK5RAP1-202ENST00000346416 C1orf195Q5TG92 126 aa8.12□□□□□ -1.11
CDK5RAP1-202ENST00000346416 MRPL34Q9BQ48 92 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP1-202ENST00000346416 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
CDK5RAP1-202ENST00000346416 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
CDK5RAP1-202ENST00000346416 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
CDK5RAP1-202ENST00000346416 NDUFS5O43920 106 aa8.1□□□□□ -1.11
CDK5RAP1-202ENST00000346416 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP1-202ENST00000346416 PRR26Q8N8Z3 221 aa8.1□□□□□ -1.11
CDK5RAP1-202ENST00000346416 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
CDK5RAP1-202ENST00000346416 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
CDK5RAP1-202ENST00000346416 SPINK1P00995 79 aa8.07□□□□□ -1.12
CDK5RAP1-202ENST00000346416 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
CDK5RAP1-202ENST00000346416 C8orf87E5RJ46 101 aa8.06□□□□□ -1.12
CDK5RAP1-202ENST00000346416 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
CDK5RAP1-202ENST00000346416 LINC00313P59037 77 aa8.03□□□□□ -1.12
CDK5RAP1-202ENST00000346416 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
CDK5RAP1-202ENST00000346416 RYR3Q15413 4870 aa8.03□□□□□ -1.12
CDK5RAP1-202ENST00000346416 PRR4Q16378 134 aa8.01□□□□□ -1.13
CDK5RAP1-202ENST00000346416 SPAG11AQ6PDA7 123 aa8□□□□□ -1.13
CDK5RAP1-202ENST00000346416 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP1-202ENST00000346416 MPLKIPQ8TAP9 179 aa7.99□□□□□ -1.13
CDK5RAP1-202ENST00000346416 Q5W150 140 aa7.96□□□□□ -1.13
CDK5RAP1-202ENST00000346416 PKHD1L1Q86WI1 4243 aa7.96□□□□□ -1.14
CDK5RAP1-202ENST00000346416 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP1-202ENST00000346416 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
CDK5RAP1-202ENST00000346416 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
CDK5RAP1-202ENST00000346416 KRTAP13-3Q3SY46 172 aa7.94□□□□□ -1.14
CDK5RAP1-202ENST00000346416 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
CDK5RAP1-202ENST00000346416 HSPG2P98160 4391 aa7.93□□□□□ -1.14
CDK5RAP1-202ENST00000346416 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
CDK5RAP1-202ENST00000346416 Q1T7F1 81 aa7.93□□□□□ -1.14
CDK5RAP1-202ENST00000346416 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
CDK5RAP1-202ENST00000346416 Q5VSD8 79 aa7.89□□□□□ -1.15
CDK5RAP1-202ENST00000346416 V9GYY9 64 aa7.88□□□□□ -1.15
CDK5RAP1-202ENST00000346416 RETNLBQ9BQ08 111 aa7.87□□□□□ -1.15
CDK5RAP1-202ENST00000346416 RYR1P21817 5038 aa7.85□□□□□ -1.15
CDK5RAP1-202ENST00000346416 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
CDK5RAP1-202ENST00000346416 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP1-202ENST00000346416 COA5Q86WW8 74 aa7.82□□□□□ -1.16
CDK5RAP1-202ENST00000346416 FLG2Q5D862 2391 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP1-202ENST00000346416 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
CDK5RAP1-202ENST00000346416 TNXBP22105 4242 aa7.8□□□□□ -1.16
CDK5RAP1-202ENST00000346416 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
CDK5RAP1-202ENST00000346416 KIAA1109Q2LD37 5005 aa7.79□□□□□ -1.16
CDK5RAP1-202ENST00000346416 Q8N1X5 172 aa7.79□□□□□ -1.16
CDK5RAP1-202ENST00000346416 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
CDK5RAP1-202ENST00000346416 IGKV2-30P06310 120 aa7.78□□□□□ -1.16
CDK5RAP1-202ENST00000346416 PSPHP1O15172 72 aa7.78□□□□□ -1.16
CDK5RAP1-202ENST00000346416 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
CDK5RAP1-202ENST00000346416 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP1-202ENST00000346416 HRES1P13985 223 aa7.73□□□□□ -1.17
CDK5RAP1-202ENST00000346416 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
CDK5RAP1-202ENST00000346416 A8MUN3 132 aa7.72□□□□□ -1.17
CDK5RAP1-202ENST00000346416 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP1-202ENST00000346416 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.18
CDK5RAP1-202ENST00000346416 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
CDK5RAP1-202ENST00000346416 A8MUU9 505 aa7.7□□□□□ -1.18
CDK5RAP1-202ENST00000346416 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
CDK5RAP1-202ENST00000346416 Q5VV11 94 aa7.69□□□□□ -1.18
CDK5RAP1-202ENST00000346416 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
CDK5RAP1-202ENST00000346416 ACYP2P14621 99 aa7.67□□□□□ -1.18
CDK5RAP1-202ENST00000346416 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
CDK5RAP1-202ENST00000346416 SEC61GP60059 68 aa7.64□□□□□ -1.19
CDK5RAP1-202ENST00000346416 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
CDK5RAP1-202ENST00000346416 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
CDK5RAP1-202ENST00000346416 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
CDK5RAP1-202ENST00000346416 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
CDK5RAP1-202ENST00000346416 Q75L30 129 aa7.63□□□□□ -1.19
CDK5RAP1-202ENST00000346416 A6NED7 52 aa7.54□□□□□ -1.2
CDK5RAP1-202ENST00000346416 SPINK7P58062 85 aa7.52□□□□□ -1.21
CDK5RAP1-202ENST00000346416 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
CDK5RAP1-202ENST00000346416 XP32Q5T750 250 aa7.49□□□□□ -1.21
CDK5RAP1-202ENST00000346416 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
CDK5RAP1-202ENST00000346416 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
CDK5RAP1-202ENST00000346416 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
CDK5RAP1-202ENST00000346416 LCA10Q71F78 164 aa7.45□□□□□ -1.22
CDK5RAP1-202ENST00000346416 A8MU10 97 aa7.44□□□□□ -1.22
CDK5RAP1-202ENST00000346416 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
CDK5RAP1-202ENST00000346416 A0A1B0GU69 56 aa7.4□□□□□ -1.22
CDK5RAP1-202ENST00000346416 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
CDK5RAP1-202ENST00000346416 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
CDK5RAP1-202ENST00000346416 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
CDK5RAP1-202ENST00000346416 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
CDK5RAP1-202ENST00000346416 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms